RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 STK26Q9P289 416 aa8.4□□□□□ -1.06
HMGB3P24-201ENST00000433260 NRXN3Q9Y4C0 1643 aa8.4□□□□□ -1.07
HMGB3P24-201ENST00000433260 SPATA31E1Q6ZUB1 1445 aa8.39□□□□□ -1.07
HMGB3P24-201ENST00000433260 ZBTB47Q9UFB7 747 aaPredicted RBP8.39□□□□□ -1.07
HMGB3P24-201ENST00000433260 IQSEC2Q5JU85 1478 aa8.38□□□□□ -1.07
HMGB3P24-201ENST00000433260 PTPRUQ92729 1446 aa8.38□□□□□ -1.07
HMGB3P24-201ENST00000433260 IFT172Q9UG01 1749 aa8.38□□□□□ -1.07
HMGB3P24-201ENST00000433260 PRR29P0C7W0 189 aa8.38□□□□□ -1.07
HMGB3P24-201ENST00000433260 CFAP70Q5T0N1 1121 aa8.38□□□□□ -1.07
HMGB3P24-201ENST00000433260 IFNLR1Q8IU57 520 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P24-201ENST00000433260 ALKQ9UM73 1620 aa8.37□□□□□ -1.07
HMGB3P24-201ENST00000433260 SETBP1Q9Y6X0 1596 aa8.37□□□□□ -1.07
HMGB3P24-201ENST00000433260 MSH6P52701 1360 aa8.35□□□□□ -1.07
HMGB3P24-201ENST00000433260 PIK3R4Q99570 1358 aa8.35□□□□□ -1.07
HMGB3P24-201ENST00000433260 DIP2AQ14689 1571 aa8.35□□□□□ -1.07
HMGB3P24-201ENST00000433260 NWD1Q149M9 1564 aa8.35□□□□□ -1.07
HMGB3P24-201ENST00000433260 ATF3P18847 181 aa8.35□□□□□ -1.07
HMGB3P24-201ENST00000433260 HSPA1LP34931 641 aa8.35□□□□□ -1.07
HMGB3P24-201ENST00000433260 WAPLQ7Z5K2 1190 aa8.35□□□□□ -1.07
HMGB3P24-201ENST00000433260 C19orf44Q9H6X5 657 aa8.35□□□□□ -1.07
HMGB3P24-201ENST00000433260 C14orf93Q9H972 538 aaKnown RBP8.35□□□□□ -1.07
HMGB3P24-201ENST00000433260 SLAIN2Q9P270 581 aa8.35□□□□□ -1.07
HMGB3P24-201ENST00000433260 DHX57Q6P158 1386 aaKnown RBP8.35□□□□□ -1.07
HMGB3P24-201ENST00000433260 SPOCK2Q92563 424 aa8.34□□□□□ -1.07
HMGB3P24-201ENST00000433260 SETD1AO15047 1707 aaKnown RBP8.34□□□□□ -1.07
HMGB3P24-201ENST00000433260 NKTRP30414 1462 aaKnown RBP8.33□□□□□ -1.08
HMGB3P24-201ENST00000433260 SAFB2Q14151 953 aaKnown RBP eCLIP8.33□□□□□ -1.08
HMGB3P24-201ENST00000433260 L3MBTL2Q969R5 705 aa8.33□□□□□ -1.08
HMGB3P24-201ENST00000433260 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.33□□□□□ -1.08
HMGB3P24-201ENST00000433260 ROBO2Q9HCK4 1378 aa8.33□□□□□ -1.08
HMGB3P24-201ENST00000433260 XRN1Q8IZH2 1706 aaKnown RBP8.32□□□□□ -1.08
HMGB3P24-201ENST00000433260 NUTM2FA1L443 756 aa8.32□□□□□ -1.08
HMGB3P24-201ENST00000433260 CADPS2Q86UW7 1296 aa8.32□□□□□ -1.08
HMGB3P24-201ENST00000433260 TRAK1Q9UPV9 953 aa8.32□□□□□ -1.08
HMGB3P24-201ENST00000433260 PIK3C2GO75747 1445 aa8.31□□□□□ -1.08
HMGB3P24-201ENST00000433260 PITPNM1O00562 1244 aa8.31□□□□□ -1.08
HMGB3P24-201ENST00000433260 POGKQ9P215 609 aa8.31□□□□□ -1.08
HMGB3P24-201ENST00000433260 NBPF1Q3BBV0 1214 aa8.3□□□□□ -1.08
HMGB3P24-201ENST00000433260 STAC3Q96MF2 364 aa8.3□□□□□ -1.08
HMGB3P24-201ENST00000433260 PLEKHH1Q9ULM0 1364 aa8.3□□□□□ -1.08
HMGB3P24-201ENST00000433260 MYOM2P54296 1465 aa8.3□□□□□ -1.08
HMGB3P24-201ENST00000433260 ROBO1Q9Y6N7 1651 aa8.3□□□□□ -1.08
HMGB3P24-201ENST00000433260 YTHDC2Q9H6S0 1430 aaKnown RBP8.29□□□□□ -1.08
HMGB3P24-201ENST00000433260 NCOA3Q9Y6Q9 1424 aa8.29□□□□□ -1.08
HMGB3P24-201ENST00000433260 PRAM1Q96QH2 718 aa8.29□□□□□ -1.08
HMGB3P24-201ENST00000433260 LRPPRCP42704 1394 aaKnown RBP8.29□□□□□ -1.08
HMGB3P24-201ENST00000433260 ABCC11Q96J66 1382 aa8.29□□□□□ -1.08
HMGB3P24-201ENST00000433260 NRXN1Q9ULB1 1477 aa8.29□□□□□ -1.08
HMGB3P24-201ENST00000433260 NALCNQ8IZF0 1738 aa8.29□□□□□ -1.08
HMGB3P24-201ENST00000433260 ASXL1Q8IXJ9 1541 aa8.29□□□□□ -1.08
HMGB3P24-201ENST00000433260 DDX17Q92841 729 aaKnown RBP8.28□□□□□ -1.08
HMGB3P24-201ENST00000433260 ORAI2Q96SN7 254 aa8.28□□□□□ -1.08
HMGB3P24-201ENST00000433260 HIRIP3Q9BW71 556 aaPredicted RBP8.28□□□□□ -1.08
HMGB3P24-201ENST00000433260 FAM135BQ49AJ0 1406 aa8.28□□□□□ -1.08
HMGB3P24-201ENST00000433260 ESCO1Q5FWF5 840 aa8.27□□□□□ -1.09
HMGB3P24-201ENST00000433260 LAMC1P11047 1609 aa8.27□□□□□ -1.09
HMGB3P24-201ENST00000433260 ADGRL3Q9HAR2 1447 aa8.27□□□□□ -1.09
HMGB3P24-201ENST00000433260 MINK1Q8N4C8 1332 aaPredicted RBP8.27□□□□□ -1.09
HMGB3P24-201ENST00000433260 PHLPP1O60346 1717 aa8.26□□□□□ -1.09
HMGB3P24-201ENST00000433260 TONSLQ96HA7 1378 aa8.26□□□□□ -1.09
HMGB3P24-201ENST00000433260 RGPD8O14715 1765 aaPredicted RBP8.26□□□□□ -1.09
HMGB3P24-201ENST00000433260 NBPF8Q3BBV2 869 aa8.26□□□□□ -1.09
HMGB3P24-201ENST00000433260 BRINP3Q76B58 766 aa8.26□□□□□ -1.09
HMGB3P24-201ENST00000433260 CCER1Q8TC90 406 aaPredicted RBP8.26□□□□□ -1.09
HMGB3P24-201ENST00000433260 SIRT1Q96EB6 747 aa8.26□□□□□ -1.09
HMGB3P24-201ENST00000433260 PTCH1Q13635 1447 aa8.26□□□□□ -1.09
HMGB3P24-201ENST00000433260 MST1RQ04912 1400 aa8.25□□□□□ -1.09
HMGB3P24-201ENST00000433260 KNDC1Q76NI1 1749 aa8.25□□□□□ -1.09
HMGB3P24-201ENST00000433260 ADGRB1O14514 1584 aa8.24□□□□□ -1.09
HMGB3P24-201ENST00000433260 TECPR2O15040 1411 aa8.24□□□□□ -1.09
HMGB3P24-201ENST00000433260 PRAG1Q86YV5 1406 aa8.24□□□□□ -1.09
HMGB3P24-201ENST00000433260 XPCQ01831 940 aaPredicted RBP8.24□□□□□ -1.09
HMGB3P24-201ENST00000433260 DISP3Q9P2K9 1392 aa8.23□□□□□ -1.09
HMGB3P24-201ENST00000433260 NUTM2BA6NNL0 878 aaPredicted RBP8.23□□□□□ -1.09
HMGB3P24-201ENST00000433260 NUTM2EB1AL46 878 aaPredicted RBP8.23□□□□□ -1.09
HMGB3P24-201ENST00000433260 NUTM2AQ8IVF1 878 aaPredicted RBP8.23□□□□□ -1.09
HMGB3P24-201ENST00000433260 C1orf167Q5SNV9 1468 aa8.23□□□□□ -1.09
HMGB3P24-201ENST00000433260 KIAA1210Q9ULL0 1709 aa8.23□□□□□ -1.09
HMGB3P24-201ENST00000433260 DCCP43146 1447 aa8.22□□□□□ -1.09
HMGB3P24-201ENST00000433260 FOXO3O43524 673 aa8.22□□□□□ -1.09
HMGB3P24-201ENST00000433260 PMFBP1Q8TBY8 1022 aa8.22□□□□□ -1.09
HMGB3P24-201ENST00000433260 CDK19Q9BWU1 502 aa8.22□□□□□ -1.09
HMGB3P24-201ENST00000433260 CREBZFQ9NS37 354 aa8.22□□□□□ -1.09
HMGB3P24-201ENST00000433260 ARHGEF28Q8N1W1 1705 aaKnown RBP8.21□□□□□ -1.09
HMGB3P24-201ENST00000433260 DLC1Q96QB1 1528 aa8.21□□□□□ -1.1
HMGB3P24-201ENST00000433260 WASLO00401 505 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P24-201ENST00000433260 LRRC59Q96AG4 307 aaKnown RBP8.21□□□□□ -1.1
HMGB3P24-201ENST00000433260 TRPM1Q7Z4N2 1603 aa8.21□□□□□ -1.1
HMGB3P24-201ENST00000433260 ROCK2O75116 1388 aaKnown RBP8.21□□□□□ -1.1
HMGB3P24-201ENST00000433260 FMN2Q9NZ56 1722 aa8.2□□□□□ -1.1
HMGB3P24-201ENST00000433260 PSME1Q06323 249 aa8.2□□□□□ -1.1
HMGB3P24-201ENST00000433260 KRT28Q7Z3Y7 464 aa8.2□□□□□ -1.1
HMGB3P24-201ENST00000433260 CARD11Q9BXL7 1154 aa8.2□□□□□ -1.1
HMGB3P24-201ENST00000433260 CIZ1Q9ULV3 898 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P24-201ENST00000433260 PHF8Q9UPP1 1060 aa8.2□□□□□ -1.1
HMGB3P24-201ENST00000433260 CDC42BPGQ6DT37 1551 aa8.19□□□□□ -1.1
HMGB3P24-201ENST00000433260 COL16A1Q07092 1604 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P24-201ENST00000433260 SRPK2P78362 688 aaKnown RBP8.19□□□□□ -1.1
HMGB3P24-201ENST00000433260 LMOD2Q6P5Q4 547 aa8.19□□□□□ -1.1
HMGB3P24-201ENST00000433260 NUDT16Q96DE0 195 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms