RNA–Protein interactions for RNA: ENST00000430799.7

ARID1A-204, Transcript of AT-rich interaction domain 1A, human

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-204	ENST00000430799	GPRASP1	Q5JY77	1395 aa		13.25	□□□□□ -0.29
ARID1A-204	ENST00000430799	NLRP2	Q9NX02	1062 aa		13.25	□□□□□ -0.29
ARID1A-204	ENST00000430799	GRIN2B	Q13224	1484 aa		13.25	□□□□□ -0.29
ARID1A-204	ENST00000430799	MTHFS	P49914	203 aa		13.25	□□□□□ -0.29
ARID1A-204	ENST00000430799	VPS37C	A5D8V6	355 aa	Predicted RBP	13.25	□□□□□ -0.29
ARID1A-204	ENST00000430799	NFXL1	Q6ZNB6	911 aa		13.25	□□□□□ -0.29
ARID1A-204	ENST00000430799	NINL	Q9Y2I6	1382 aa		13.25	□□□□□ -0.29
ARID1A-204	ENST00000430799	PDE3A	Q14432	1141 aa		13.25	□□□□□ -0.29
ARID1A-204	ENST00000430799	CCDC30	Q5VVM6	783 aa		13.25	□□□□□ -0.29
ARID1A-204	ENST00000430799	CT47B1	P0C2W7	299 aa	Predicted RBP	13.25	□□□□□ -0.29
ARID1A-204	ENST00000430799	MCM2	P49736	904 aa		13.24	□□□□□ -0.29
ARID1A-204	ENST00000430799	PLEKHH2	Q8IVE3	1493 aa		13.24	□□□□□ -0.29
ARID1A-204	ENST00000430799	HMOX1	P09601	288 aa		13.24	□□□□□ -0.29
ARID1A-204	ENST00000430799	SYNJ2	O15056	1496 aa		13.24	□□□□□ -0.29
ARID1A-204	ENST00000430799	DHX16	O60231	1041 aa	Known RBP	13.24	□□□□□ -0.29
ARID1A-204	ENST00000430799	NECTIN2	Q92692	538 aa		13.24	□□□□□ -0.29
ARID1A-204	ENST00000430799	ADAMTS8	Q9UP79	889 aa		13.24	□□□□□ -0.29
ARID1A-204	ENST00000430799	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.23	□□□□□ -0.29
ARID1A-204	ENST00000430799	SASS6	Q6UVJ0	657 aa		13.23	□□□□□ -0.29
ARID1A-204	ENST00000430799	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.23	□□□□□ -0.29
ARID1A-204	ENST00000430799	HIP1	O00291	1037 aa		13.23	□□□□□ -0.29
ARID1A-204	ENST00000430799	SYTL4	Q96C24	671 aa	Predicted RBP	13.23	□□□□□ -0.29
ARID1A-204	ENST00000430799	CABP2	Q9NPB3	220 aa		13.23	□□□□□ -0.29
ARID1A-204	ENST00000430799	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.23	□□□□□ -0.29
ARID1A-204	ENST00000430799	ARID3A	Q99856	593 aa		13.23	□□□□□ -0.29
ARID1A-204	ENST00000430799	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.23	□□□□□ -0.29
ARID1A-204	ENST00000430799	MSH5	O43196	834 aa		13.23	□□□□□ -0.29
ARID1A-204	ENST00000430799	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	ERICH3	Q5RHP9	1530 aa		13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	XBP1	P17861	261 aa		13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	PPP2R1A	P30153	589 aa		13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	CFAP70	Q5T0N1	1121 aa		13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	CNTROB	Q8N137	903 aa		13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	SLC52A1	Q9NWF4	448 aa		13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	CCAR2	Q8N163	923 aa	Known RBP	13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	PDC	P20941	246 aa		13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	GCC1	Q96CN9	775 aa		13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	ZNF692	Q9BU19	519 aa	Predicted RBP	13.22	□□□□□ -0.29
ARID1A-204	ENST00000430799	ERC1	Q8IUD2	1116 aa		13.21	□□□□□ -0.29
ARID1A-204	ENST00000430799	RBM33	Q96EV2	1170 aa	Known RBP	13.21	□□□□□ -0.29
ARID1A-204	ENST00000430799	NEUROD6	Q96NK8	337 aa		13.21	□□□□□ -0.29
ARID1A-204	ENST00000430799	AFAP1	Q8N556	730 aa		13.21	□□□□□ -0.29
ARID1A-204	ENST00000430799	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.21	□□□□□ -0.29
ARID1A-204	ENST00000430799	PANK1	Q8TE04	598 aa		13.21	□□□□□ -0.29
ARID1A-204	ENST00000430799	BRMS1	Q9HCU9	246 aa		13.21	□□□□□ -0.29
ARID1A-204	ENST00000430799	MBD3	O95983	291 aa		13.21	□□□□□ -0.3
ARID1A-204	ENST00000430799	AQR	O60306	1485 aa	Known RBP eCLIP	13.2	□□□□□ -0.3	6e-7	■■■■■ 35.2
ARID1A-204	ENST00000430799	TMEM132E	Q6IEE7	984 aa		13.2	□□□□□ -0.3
ARID1A-204	ENST00000430799	PNISR	Q8TF01	805 aa	Known RBP	13.2	□□□□□ -0.3
ARID1A-204	ENST00000430799	NAT10	Q9H0A0	1025 aa	Known RBP	13.2	□□□□□ -0.3
ARID1A-204	ENST00000430799	WASHC4	Q2M389	1173 aa		13.2	□□□□□ -0.3
ARID1A-204	ENST00000430799	SART3	Q15020	963 aa	Known RBP	13.2	□□□□□ -0.3
ARID1A-204	ENST00000430799	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.2	□□□□□ -0.3
ARID1A-204	ENST00000430799	TBC1D2B	Q9UPU7	963 aa		13.2	□□□□□ -0.3
ARID1A-204	ENST00000430799	PRM3	Q9NNZ6	103 aa		13.19	□□□□□ -0.3
ARID1A-204	ENST00000430799	PRKAR2B	P31323	418 aa		13.19	□□□□□ -0.3
ARID1A-204	ENST00000430799	PDE4C	Q08493	712 aa		13.19	□□□□□ -0.3
ARID1A-204	ENST00000430799	HOMER1	Q86YM7	354 aa		13.19	□□□□□ -0.3
ARID1A-204	ENST00000430799	RABEP1	Q15276	862 aa		13.19	□□□□□ -0.3
ARID1A-204	ENST00000430799	SURF6	O75683	361 aa	Known RBP	13.19	□□□□□ -0.3
ARID1A-204	ENST00000430799	FSD1	Q9BTV5	496 aa		13.19	□□□□□ -0.3
ARID1A-204	ENST00000430799	RPGRIP1L	Q68CZ1	1315 aa		13.18	□□□□□ -0.3
ARID1A-204	ENST00000430799	CCDC43	Q96MW1	224 aa	Known RBP	13.18	□□□□□ -0.3
ARID1A-204	ENST00000430799	ZNF428	Q96B54	188 aa		13.18	□□□□□ -0.3
ARID1A-204	ENST00000430799	KIAA1107	Q9UPP5	1409 aa		13.18	□□□□□ -0.3
ARID1A-204	ENST00000430799	MRE11	P49959	708 aa		13.18	□□□□□ -0.3
ARID1A-204	ENST00000430799	RAD21	O60216	631 aa		13.18	□□□□□ -0.3
ARID1A-204	ENST00000430799	TWISTNB	Q3B726	338 aa	Predicted RBP	13.18	□□□□□ -0.3
ARID1A-204	ENST00000430799	ARHGAP5	Q13017	1502 aa		13.18	□□□□□ -0.3
ARID1A-204	ENST00000430799	LETM1	O95202	739 aa	Predicted RBP	13.18	□□□□□ -0.3
ARID1A-204	ENST00000430799	TXNDC2	Q86VQ3	553 aa		13.17	□□□□□ -0.3
ARID1A-204	ENST00000430799	AIMP1	Q12904	312 aa	Known RBP	13.17	□□□□□ -0.3
ARID1A-204	ENST00000430799	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.17	□□□□□ -0.3
ARID1A-204	ENST00000430799	EFCAB5	A4FU69	1503 aa		13.17	□□□□□ -0.3
ARID1A-204	ENST00000430799	SET	Q01105	290 aa	Predicted RBP	13.17	□□□□□ -0.3
ARID1A-204	ENST00000430799	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.17	□□□□□ -0.3
ARID1A-204	ENST00000430799	WDR63	Q8IWG1	891 aa		13.16	□□□□□ -0.3
ARID1A-204	ENST00000430799	SMG6	Q86US8	1419 aa	Known RBP	13.16	□□□□□ -0.3
ARID1A-204	ENST00000430799	EXOSC9	Q06265	439 aa	Known RBP	13.16	□□□□□ -0.3
ARID1A-204	ENST00000430799	ABTB2	Q8N961	1025 aa		13.16	□□□□□ -0.3
ARID1A-204	ENST00000430799	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.16	□□□□□ -0.3
ARID1A-204	ENST00000430799	CDR1	P51861	262 aa		13.16	□□□□□ -0.3
ARID1A-204	ENST00000430799	SDF4	Q9BRK5	362 aa		13.16	□□□□□ -0.3
ARID1A-204	ENST00000430799	CCT4	P50991	539 aa	Known RBP	13.16	□□□□□ -0.3
ARID1A-204	ENST00000430799	ZNF592	Q92610	1267 aa		13.16	□□□□□ -0.3
ARID1A-204	ENST00000430799	GNAI2	P04899	355 aa		13.15	□□□□□ -0.3
ARID1A-204	ENST00000430799	OLFM4	Q6UX06	510 aa		13.15	□□□□□ -0.3
ARID1A-204	ENST00000430799	ACBD3	Q9H3P7	528 aa		13.15	□□□□□ -0.3
ARID1A-204	ENST00000430799	ANKRD30B	Q9BXX2	1392 aa		13.15	□□□□□ -0.3
ARID1A-204	ENST00000430799	FAM43A	Q8N2R8	423 aa		13.15	□□□□□ -0.3
ARID1A-204	ENST00000430799	TRO	Q12816	1431 aa	Predicted RBP	13.15	□□□□□ -0.31
ARID1A-204	ENST00000430799	TEX35	Q5T0J7	233 aa		13.14	□□□□□ -0.31
ARID1A-204	ENST00000430799	PRG4	Q92954	1404 aa	Predicted RBP	13.14	□□□□□ -0.31
ARID1A-204	ENST00000430799	CFTR	P13569	1480 aa		13.14	□□□□□ -0.31
ARID1A-204	ENST00000430799	C9orf84	Q5VXU9	1444 aa		13.14	□□□□□ -0.31
ARID1A-204	ENST00000430799	DHX8	Q14562	1220 aa	Known RBP	13.14	□□□□□ -0.31
ARID1A-204	ENST00000430799	MEX3C	Q5U5Q3	659 aa	Known RBP	13.14	□□□□□ -0.31
ARID1A-204	ENST00000430799	PRAM1	Q96QH2	718 aa		13.14	□□□□□ -0.31
ARID1A-204	ENST00000430799	TAT	P17735	454 aa	Predicted RBP	13.13	□□□□□ -0.31

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