RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 MS4A1P11836 297 aa10.37□□□□□ -0.75
LINC00348-201ENST00000428761 SLC6A16Q9GZN6 736 aa10.37□□□□□ -0.75
LINC00348-201ENST00000428761 TNFRSF10AO00220 468 aa10.36□□□□□ -0.75
LINC00348-201ENST00000428761 MYT1Q01538 1121 aa10.36□□□□□ -0.75
LINC00348-201ENST00000428761 ZNF775Q96BV0 537 aaPredicted RBP10.36□□□□□ -0.75
LINC00348-201ENST00000428761 DGAT1O75907 488 aa10.35□□□□□ -0.75
LINC00348-201ENST00000428761 PRR20EP86478 221 aa10.35□□□□□ -0.75
LINC00348-201ENST00000428761 PRR20CP86479 221 aa10.35□□□□□ -0.75
LINC00348-201ENST00000428761 PRR20DP86480 221 aa10.35□□□□□ -0.75
LINC00348-201ENST00000428761 PRR20BP86481 221 aa10.35□□□□□ -0.75
LINC00348-201ENST00000428761 PRR20AP86496 221 aa10.35□□□□□ -0.75
LINC00348-201ENST00000428761 SLC27A5Q9Y2P5 690 aa10.35□□□□□ -0.75
LINC00348-201ENST00000428761 FAM187AA6NFU0 413 aa10.34□□□□□ -0.75
LINC00348-201ENST00000428761 USP46P62068 366 aa10.34□□□□□ -0.75
LINC00348-201ENST00000428761 BEGAINQ9BUH8 593 aa10.34□□□□□ -0.75
LINC00348-201ENST00000428761 SUPT5HO00267 1087 aaKnown RBP10.33□□□□□ -0.76
LINC00348-201ENST00000428761 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
LINC00348-201ENST00000428761 PLA2G2CQ5R387 149 aa10.33□□□□□ -0.76
LINC00348-201ENST00000428761 NUTM1Q86Y26 1132 aa10.33□□□□□ -0.76
LINC00348-201ENST00000428761 SPIRE2Q8WWL2 714 aa10.33□□□□□ -0.76
LINC00348-201ENST00000428761 HLA-CQ95604 372 aa10.33□□□□□ -0.76
LINC00348-201ENST00000428761 HOXA2O43364 376 aa10.32□□□□□ -0.76
LINC00348-201ENST00000428761 THAP11Q96EK4 314 aa10.32□□□□□ -0.76
LINC00348-201ENST00000428761 GDF9O60383 454 aa10.31□□□□□ -0.76
LINC00348-201ENST00000428761 SPSB2Q99619 263 aa10.31□□□□□ -0.76
LINC00348-201ENST00000428761 BRICD5Q6PL45 260 aa10.3□□□□□ -0.76
LINC00348-201ENST00000428761 GPBP1L1Q9HC44 474 aaPredicted RBP10.3□□□□□ -0.76
LINC00348-201ENST00000428761 POTECB2RU33 542 aa10.29□□□□□ -0.76
LINC00348-201ENST00000428761 SALL2Q9Y467 1007 aaPredicted RBP10.29□□□□□ -0.76
LINC00348-201ENST00000428761 GUCA2AQ02747 115 aa10.28□□□□□ -0.76
LINC00348-201ENST00000428761 FOXC1Q12948 553 aa10.28□□□□□ -0.76
LINC00348-201ENST00000428761 TBC1D2Q9BYX2 928 aa10.28□□□□□ -0.76
LINC00348-201ENST00000428761 KDM4CQ9H3R0 1056 aa10.28□□□□□ -0.76
LINC00348-201ENST00000428761 NDUFV2P19404 249 aa10.27□□□□□ -0.77
LINC00348-201ENST00000428761 RNF19BQ6ZMZ0 732 aa10.27□□□□□ -0.77
LINC00348-201ENST00000428761 MOXD2PA6NHM9 499 aa10.26□□□□□ -0.77
LINC00348-201ENST00000428761 FMNL1O95466 1100 aaPredicted RBP10.26□□□□□ -0.77
LINC00348-201ENST00000428761 FAM160A2Q8N612 972 aaPredicted RBP10.26□□□□□ -0.77
LINC00348-201ENST00000428761 PCDHGC3Q9UN70 934 aa10.25□□□□□ -0.77
LINC00348-201ENST00000428761 ST8SIA5O15466 376 aa10.24□□□□□ -0.77
LINC00348-201ENST00000428761 FDX1P10109 184 aa10.24□□□□□ -0.77
LINC00348-201ENST00000428761 Q3C1V9 767 aa10.24□□□□□ -0.77
LINC00348-201ENST00000428761 DIXDC1Q155Q3 683 aa10.23□□□□□ -0.77
LINC00348-201ENST00000428761 FAM117AQ9C073 453 aa10.23□□□□□ -0.77
LINC00348-201ENST00000428761 PKD2L1Q9P0L9 805 aa10.23□□□□□ -0.77
LINC00348-201ENST00000428761 SYMPKQ92797 1274 aaKnown RBP10.22□□□□□ -0.77
LINC00348-201ENST00000428761 AAASQ9NRG9 546 aa10.22□□□□□ -0.77
LINC00348-201ENST00000428761 FCF1Q9Y324 198 aaKnown RBP10.22□□□□□ -0.77
LINC00348-201ENST00000428761 IL27Q8NEV9 243 aa10.21□□□□□ -0.77
LINC00348-201ENST00000428761 SPTLC1O15269 473 aa10.2□□□□□ -0.78
LINC00348-201ENST00000428761 CD2BP2O95400 341 aaKnown RBP10.2□□□□□ -0.78
LINC00348-201ENST00000428761 GJA5P36382 358 aa10.2□□□□□ -0.78
LINC00348-201ENST00000428761 RPIAP49247 311 aa10.2□□□□□ -0.78
LINC00348-201ENST00000428761 MYSM1Q5VVJ2 828 aa10.2□□□□□ -0.78
LINC00348-201ENST00000428761 RSBN1LQ6PCB5 846 aaPredicted RBP10.2□□□□□ -0.78
LINC00348-201ENST00000428761 USB1Q9BQ65 265 aaKnown RBP10.2□□□□□ -0.78
LINC00348-201ENST00000428761 ZMYND15Q9H091 742 aa10.2□□□□□ -0.78
LINC00348-201ENST00000428761 PCDHB15Q9Y5E8 787 aa10.2□□□□□ -0.78
LINC00348-201ENST00000428761 MSS51Q4VC12 460 aa10.19□□□□□ -0.78
LINC00348-201ENST00000428761 RIC3Q7Z5B4 369 aa10.19□□□□□ -0.78
LINC00348-201ENST00000428761 PRDM9Q9NQV7 894 aa10.19□□□□□ -0.78
LINC00348-201ENST00000428761 PLEKHG3A1L390 1219 aa10.18□□□□□ -0.78
LINC00348-201ENST00000428761 CYP4X1Q8N118 509 aa10.17□□□□□ -0.78
LINC00348-201ENST00000428761 DDRGK1Q96HY6 314 aa10.16□□□□□ -0.78
LINC00348-201ENST00000428761 LIMD1Q9UGP4 676 aa10.16□□□□□ -0.78
LINC00348-201ENST00000428761 C6orf229H3BNL8 230 aa10.15□□□□□ -0.78
LINC00348-201ENST00000428761 MMP16P51512 607 aa10.15□□□□□ -0.78
LINC00348-201ENST00000428761 RETREG3Q86VR2 466 aa10.15□□□□□ -0.78
LINC00348-201ENST00000428761 RSPH6AQ9H0K4 717 aa10.15□□□□□ -0.78
LINC00348-201ENST00000428761 ZBTB24O43167 697 aaPredicted RBP10.14□□□□□ -0.79
LINC00348-201ENST00000428761 POLR3EQ9NVU0 708 aa10.14□□□□□ -0.79
LINC00348-201ENST00000428761 TOR4AQ9NXH8 423 aa10.14□□□□□ -0.79
LINC00348-201ENST00000428761 DACH1Q9UI36 760 aa10.14□□□□□ -0.79
LINC00348-201ENST00000428761 DXOO77932 396 aaKnown RBP10.13□□□□□ -0.79
LINC00348-201ENST00000428761 TUSC1Q2TAM9 212 aa10.13□□□□□ -0.79
LINC00348-201ENST00000428761 HRCP23327 699 aa10.12□□□□□ -0.79
LINC00348-201ENST00000428761 MTMR2Q13614 643 aa10.12□□□□□ -0.79
LINC00348-201ENST00000428761 AXIN1O15169 862 aa10.11□□□□□ -0.79
LINC00348-201ENST00000428761 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
LINC00348-201ENST00000428761 SKIV2LQ15477 1246 aaKnown RBP10.11□□□□□ -0.79
LINC00348-201ENST00000428761 CSPP1Q1MSJ5 1256 aa10.11□□□□□ -0.79
LINC00348-201ENST00000428761 PRPF38BQ5VTL8 546 aaKnown RBP10.11□□□□□ -0.79
LINC00348-201ENST00000428761 CABLES1Q8TDN4 633 aa10.11□□□□□ -0.79
LINC00348-201ENST00000428761 TTC24A2A3L6 582 aaPredicted RBP10.1□□□□□ -0.79
LINC00348-201ENST00000428761 SPDYE5A6NIY4 337 aa10.1□□□□□ -0.79
LINC00348-201ENST00000428761 QPCTQ16769 361 aa10.1□□□□□ -0.79
LINC00348-201ENST00000428761 SH3D19Q5HYK7 790 aa10.1□□□□□ -0.79
LINC00348-201ENST00000428761 TREML4Q6UXN2 200 aa10.1□□□□□ -0.79
LINC00348-201ENST00000428761 CRIPAKQ8N1N5 446 aa10.1□□□□□ -0.79
LINC00348-201ENST00000428761 PRR7Q8TB68 274 aa10.1□□□□□ -0.79
LINC00348-201ENST00000428761 LILRB3O75022 631 aa10.09□□□□□ -0.79
LINC00348-201ENST00000428761 AVPP01185 164 aa10.09□□□□□ -0.79
LINC00348-201ENST00000428761 JUNDP17535 347 aa10.09□□□□□ -0.79
LINC00348-201ENST00000428761 PROCA1Q8NCQ7 364 aaPredicted RBP10.09□□□□□ -0.79
LINC00348-201ENST00000428761 ZBTB3Q9H5J0 574 aa10.09□□□□□ -0.79
LINC00348-201ENST00000428761 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
LINC00348-201ENST00000428761 GMPR2Q9P2T1 348 aaKnown RBP10.08□□□□□ -0.8
LINC00348-201ENST00000428761 CFAP99D6REC4 459 aa10.07□□□□□ -0.8
LINC00348-201ENST00000428761 UBTFP17480 764 aaKnown RBP10.07□□□□□ -0.8
LINC00348-201ENST00000428761 CTC1Q2NKJ3 1217 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms