RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 U2SURPO15042 1029 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-202ENST00000425518 FTSJ3Q8IY81 847 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-202ENST00000425518 NOS1P29475 1434 aa9.6□□□□□ -0.87
SMARCC1-202ENST00000425518 WDR63Q8IWG1 891 aa9.6□□□□□ -0.87
SMARCC1-202ENST00000425518 TSR2Q969E8 191 aaKnown RBP9.6□□□□□ -0.87
SMARCC1-202ENST00000425518 DNAJC5Q9H3Z4 198 aa9.6□□□□□ -0.87
SMARCC1-202ENST00000425518 MYH16Q9H6N6 1097 aa9.6□□□□□ -0.87
SMARCC1-202ENST00000425518 CABP2Q9NPB3 220 aa9.59□□□□□ -0.87
SMARCC1-202ENST00000425518 C14orf93Q9H972 538 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-202ENST00000425518 STK26Q9P289 416 aa9.59□□□□□ -0.87
SMARCC1-202ENST00000425518 NINLQ9Y2I6 1382 aa9.58□□□□□ -0.88
SMARCC1-202ENST00000425518 FANCAO15360 1455 aa9.58□□□□□ -0.88
SMARCC1-202ENST00000425518 SMC4Q9NTJ3 1288 aa9.58□□□□□ -0.88
SMARCC1-202ENST00000425518 PRKCSHP14314 528 aaPredicted RBP9.58□□□□□ -0.88
SMARCC1-202ENST00000425518 ZKSCAN2Q63HK3 967 aa9.58□□□□□ -0.88
SMARCC1-202ENST00000425518 EIF5BO60841 1220 aaKnown RBP9.58□□□□□ -0.88
SMARCC1-202ENST00000425518 DZIP1LQ8IYY4 767 aaKnown RBP9.58□□□□□ -0.88
SMARCC1-202ENST00000425518 TBC1D2Q9BYX2 928 aa9.58□□□□□ -0.88
SMARCC1-202ENST00000425518 KDM5AP29375 1690 aaKnown RBP9.58□□□□□ -0.88
SMARCC1-202ENST00000425518 ZFYVE16Q7Z3T8 1539 aa9.58□□□□□ -0.88
SMARCC1-202ENST00000425518 MFAP1P55081 439 aaKnown RBP9.57□□□□□ -0.88
SMARCC1-202ENST00000425518 EXOSC9Q06265 439 aaKnown RBP9.57□□□□□ -0.88
SMARCC1-202ENST00000425518 MVPQ14764 893 aaKnown RBP9.57□□□□□ -0.88
SMARCC1-202ENST00000425518 SPHKAPQ2M3C7 1700 aa9.57□□□□□ -0.88
SMARCC1-202ENST00000425518 ZCCHC11Q5TAX3 1644 aaKnown RBP9.57□□□□□ -0.88
SMARCC1-202ENST00000425518 ITPRIPQ8IWB1 547 aa9.57□□□□□ -0.88
SMARCC1-202ENST00000425518 TBC1D32Q96NH3 1257 aa9.57□□□□□ -0.88
SMARCC1-202ENST00000425518 GGNBP2Q9H3C7 697 aa9.57□□□□□ -0.88
SMARCC1-202ENST00000425518 SHROOM2Q13796 1616 aa9.56□□□□□ -0.88
SMARCC1-202ENST00000425518 PHF23Q9BUL5 403 aaPredicted RBP9.56□□□□□ -0.88
SMARCC1-202ENST00000425518 ADGRL1O94910 1474 aa9.56□□□□□ -0.88
SMARCC1-202ENST00000425518 RIMBP3CA6NJZ7 1639 aa9.56□□□□□ -0.88
SMARCC1-202ENST00000425518 RIMBP3BA6NNM3 1639 aa9.56□□□□□ -0.88
SMARCC1-202ENST00000425518 RIMBP3Q9UFD9 1639 aa9.56□□□□□ -0.88
SMARCC1-202ENST00000425518 MYOM1P52179 1685 aa9.56□□□□□ -0.88
SMARCC1-202ENST00000425518 SRPK2P78362 688 aaKnown RBP9.56□□□□□ -0.88
SMARCC1-202ENST00000425518 AAMPQ13685 434 aa9.56□□□□□ -0.88
SMARCC1-202ENST00000425518 GZF1Q9H116 711 aaPredicted RBP9.56□□□□□ -0.88
SMARCC1-202ENST00000425518 ATP7AQ04656 1500 aa9.55□□□□□ -0.88
SMARCC1-202ENST00000425518 EVC2Q86UK5 1308 aa9.55□□□□□ -0.88
SMARCC1-202ENST00000425518 CCDC27Q2M243 656 aa9.55□□□□□ -0.88
SMARCC1-202ENST00000425518 SSH1Q8WYL5 1049 aa9.54□□□□□ -0.88
SMARCC1-202ENST00000425518 CEP152O94986 1710 aa9.54□□□□□ -0.88
SMARCC1-202ENST00000425518 MYOM2P54296 1465 aa9.54□□□□□ -0.88
SMARCC1-202ENST00000425518 TRHP20396 242 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-202ENST00000425518 C22orf23Q9BZE7 217 aa9.54□□□□□ -0.88
SMARCC1-202ENST00000425518 SBNO2Q9Y2G9 1366 aa9.54□□□□□ -0.88
SMARCC1-202ENST00000425518 MAP3K4Q9Y6R4 1608 aa9.54□□□□□ -0.88
SMARCC1-202ENST00000425518 TET3O43151 1660 aa9.54□□□□□ -0.88
SMARCC1-202ENST00000425518 ANTXR1Q9H6X2 564 aa9.54□□□□□ -0.88
SMARCC1-202ENST00000425518 ABCA6Q8N139 1617 aa9.54□□□□□ -0.88
SMARCC1-202ENST00000425518 TRIM27P14373 513 aa9.53□□□□□ -0.88
SMARCC1-202ENST00000425518 NOB1Q9ULX3 412 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-202ENST00000425518 UHRF1BP1LA0JNW5 1464 aa9.53□□□□□ -0.88
SMARCC1-202ENST00000425518 TMPOP42166 694 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-202ENST00000425518 RIPK4P57078 832 aa9.52□□□□□ -0.88
SMARCC1-202ENST00000425518 VGFO15240 615 aaPredicted RBP9.52□□□□□ -0.89
SMARCC1-202ENST00000425518 NPM1P06748 294 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMARCC1-202ENST00000425518 ATF7IPQ6VMQ6 1270 aa9.52□□□□□ -0.89
SMARCC1-202ENST00000425518 MINK1Q8N4C8 1332 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-202ENST00000425518 TMEM57Q8N5G2 664 aa9.51□□□□□ -0.89
SMARCC1-202ENST00000425518 DDX19BQ9UMR2 479 aa9.51□□□□□ -0.89
SMARCC1-202ENST00000425518 ZNF518AQ6AHZ1 1483 aa9.51□□□□□ -0.89
SMARCC1-202ENST00000425518 TRIM35Q9UPQ4 493 aa9.51□□□□□ -0.89
SMARCC1-202ENST00000425518 LNPKQ9C0E8 428 aa9.5□□□□□ -0.89
SMARCC1-202ENST00000425518 CFAP65Q6ZU64 1925 aaKnown RBP9.5□□□□□ -0.89
SMARCC1-202ENST00000425518 MCM4P33991 863 aa9.5□□□□□ -0.89
SMARCC1-202ENST00000425518 L1TD1Q5T7N2 865 aaKnown RBP9.5□□□□□ -0.89
SMARCC1-202ENST00000425518 NLRP1Q9C000 1473 aa9.5□□□□□ -0.89
SMARCC1-202ENST00000425518 NPATQ14207 1427 aa9.5□□□□□ -0.89
SMARCC1-202ENST00000425518 VWDEQ8N2E2 1590 aa9.5□□□□□ -0.89
SMARCC1-202ENST00000425518 RPGRIP1LQ68CZ1 1315 aa9.49□□□□□ -0.89
SMARCC1-202ENST00000425518 FBLN1P23142 703 aa9.49□□□□□ -0.89
SMARCC1-202ENST00000425518 FAM43AQ8N2R8 423 aa9.49□□□□□ -0.89
SMARCC1-202ENST00000425518 ANKRD36BQ8N2N9 1353 aa9.49□□□□□ -0.89
SMARCC1-202ENST00000425518 HSCBQ8IWL3 235 aa9.49□□□□□ -0.89
SMARCC1-202ENST00000425518 CHMP5Q9NZZ3 219 aa9.49□□□□□ -0.89
SMARCC1-202ENST00000425518 DEPDC5O75140 1603 aa9.49□□□□□ -0.89
SMARCC1-202ENST00000425518 KIAA1210Q9ULL0 1709 aa9.49□□□□□ -0.89
SMARCC1-202ENST00000425518 RAPGEF3O95398 923 aa9.49□□□□□ -0.89
SMARCC1-202ENST00000425518 PLEKHF1Q96S99 279 aa9.49□□□□□ -0.89
SMARCC1-202ENST00000425518 GOLGA6L3A6NEY3 463 aa9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 ELL2O00472 640 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 FYB1O15117 783 aa9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 IPO8O15397 1037 aaKnown RBP9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 DIAPH1O60610 1272 aaKnown RBP9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 CT47B1P0C2W7 299 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 HDAC1Q13547 482 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 IQSEC2Q5JU85 1478 aa9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 IDI1Q13907 227 aa9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 NRXN1Q9ULB1 1477 aa9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 ASXL2Q76L83 1435 aa9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 EFCAB6Q5THR3 1501 aa9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 CYB5RLQ6IPT4 315 aa9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 TERF2IPQ9NYB0 399 aa9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 ARAP3Q8WWN8 1544 aa9.48□□□□□ -0.89
SMARCC1-202ENST00000425518 TRAK2O60296 914 aa9.47□□□□□ -0.89
SMARCC1-202ENST00000425518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■■■■□ 20.4
SMARCC1-202ENST00000425518 PRAM1Q96QH2 718 aa9.47□□□□□ -0.89
SMARCC1-202ENST00000425518 KIF1BO60333 1816 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms