RNA–Protein interactions for RNA: ENST00000423806.2

HMGN2P38-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 38, humanhuman

BASIC

Gene HMGN2P38, Length 265 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P38-201ENST00000423806 SSR1P43307 286 aaKnown RBP2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 SLC4A3P48751 1232 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 GTF2A1P52655 376 aaPredicted RBP2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 HNRNPUQ00839 825 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 CCDC173Q0VFZ6 552 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 MYBPC2Q14324 1141 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 UVSSAQ2YD98 709 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 C1QTNF12Q5T7M4 302 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 RINLQ6ZS11 566 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 SDR16C5Q8N3Y7 309 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 ZNF526Q8TF50 670 aaPredicted RBP2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 ANKRD7Q92527 254 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 ARHGEF1Q92888 912 aaKnown RBP2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 SLC26A8Q96RN1 970 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 SIN3AQ96ST3 1273 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 OGFRQ9NZT2 677 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 NOL7Q9UMY1 257 aaKnown RBP2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 RPS6KL1Q9Y6S9 549 aa2.61□□□□□ -1.99
HMGN2P38-201ENST00000423806 FAM163BP0C2L3 166 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 ZNF853P0CG23 659 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 RBM25P49756 843 aaKnown RBP2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 INHBEP58166 350 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 HMGN5P82970 282 aaKnown RBP2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 DNAJC21Q5F1R6 531 aaKnown RBP2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 ZNF771Q7L3S4 317 aaPredicted RBP2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 RPAINQ86UA6 219 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 JMYQ8N9B5 988 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 MNS1Q8NEH6 495 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 NECTIN2Q92692 538 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 PDLIM2Q96JY6 352 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 CALR3Q96L12 384 aaKnown RBP2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 PRIMPOLQ96LW4 560 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 KRTAP3-3Q9BYR6 98 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 KRTAP3-2Q9BYR7 98 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 NBPF3Q9H094 633 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 PAXBP1Q9Y5B6 917 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 USP19O94966 1318 aa2.6□□□□□ -1.99
HMGN2P38-201ENST00000423806 CEP162Q5TB80 1403 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 MYOM3Q5VTT5 1437 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 SMARCA2P51531 1590 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 CTAGE5O15320 804 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 IPO8O15397 1037 aaKnown RBP2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 TRAK2O60296 914 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 NEFHP12036 1026 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 CD151P48509 253 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 HDAC1Q13547 482 aaPredicted RBP2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 FAM50AQ14320 339 aaKnown RBP2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 BECN1Q14457 450 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 TERF2Q15554 542 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 MUM1L1Q5H9M0 696 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 GAS2L3Q86XJ1 694 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 FAM9BQ8IZU0 186 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 FAM177A1Q8N128 213 aaPredicted RBP2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 ZNF513Q8N8E2 541 aaPredicted RBP2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 TBC1D22AQ8WUA7 517 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 SLX1AQ9BQ83 275 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 TEX13AQ9BXU3 409 aaPredicted RBP2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 CXorf56Q9H5V9 222 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 PANK3Q9H999 370 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 ATG3Q9NT62 314 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 RSPH14Q9UHP6 348 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 SUFUQ9UMX1 484 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 NUDCQ9Y266 331 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 KDM2AQ9Y2K7 1162 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 KNSTRNQ9Y448 316 aa2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 MORC2Q9Y6X9 1032 aaPredicted RBP2.59□□□□□ -1.99
HMGN2P38-201ENST00000423806 ARHGAP31Q2M1Z3 1444 aa2.59□□□□□ -2
HMGN2P38-201ENST00000423806 ANKRD18BA2A2Z9 1011 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 CTIFO43310 598 aaKnown RBP2.58□□□□□ -2
HMGN2P38-201ENST00000423806 REC8O95072 547 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 ATP2B1P20020 1258 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 SCP2P22307 547 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 CASQ1P31415 396 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 TDO2P48775 406 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 TRDNQ13061 729 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 SYCP1Q15431 976 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 C8orf34Q49A92 452 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 MAP9Q49MG5 647 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 LRCH2Q5VUJ6 765 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 SPTY2D1Q68D10 685 aaPredicted RBP2.58□□□□□ -2
HMGN2P38-201ENST00000423806 DDX46Q7L014 1031 aaKnown RBP2.58□□□□□ -2
HMGN2P38-201ENST00000423806 NLRP13Q86W25 1043 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 PDCL2Q8N4E4 241 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 MSL3Q8N5Y2 521 aaKnown RBP2.58□□□□□ -2
HMGN2P38-201ENST00000423806 NFATC2IPQ8NCF5 419 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 TNPO1Q92973 898 aaKnown RBP2.58□□□□□ -2
HMGN2P38-201ENST00000423806 TATDN2Q93075 761 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 ZNF446Q9NWS9 450 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 ZRANB1Q9UGI0 708 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 CTNNA3Q9UI47 895 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 DDX41Q9UJV9 622 aaKnown RBP2.58□□□□□ -2
HMGN2P38-201ENST00000423806 SMC3Q9UQE7 1217 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 ZKSCAN5Q9Y2L8 839 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 NUB1Q9Y5A7 615 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 MRVI1Q9Y6F6 885 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 KANK1Q14678 1352 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 NPC1L1Q9UHC9 1359 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 TNIKQ9UKE5 1360 aa2.58□□□□□ -2
HMGN2P38-201ENST00000423806 KIAA1107Q9UPP5 1409 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms