RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.74□□□□□ -1.17
SBNO1-202ENST00000420886 GTF2F1P35269 517 aaKnown RBP eCLIP7.74□□□□□ -1.17
SBNO1-202ENST00000420886 OS9Q13438 667 aaPredicted RBP7.74□□□□□ -1.17
SBNO1-202ENST00000420886 FILIP1Q7Z7B0 1213 aa7.74□□□□□ -1.17
SBNO1-202ENST00000420886 GPATCH3Q96I76 525 aa7.74□□□□□ -1.17
SBNO1-202ENST00000420886 ROCK1Q13464 1354 aa7.74□□□□□ -1.17
SBNO1-202ENST00000420886 FOXD4L6Q3SYB3 417 aaPredicted RBP7.74□□□□□ -1.17
SBNO1-202ENST00000420886 FOXD4L3Q6VB84 417 aaPredicted RBP7.74□□□□□ -1.17
SBNO1-202ENST00000420886 MIA2Q96PC5 1412 aa7.74□□□□□ -1.17
SBNO1-202ENST00000420886 RRP12Q5JTH9 1297 aaKnown RBP7.74□□□□□ -1.17
SBNO1-202ENST00000420886 MYRIPQ8NFW9 859 aa7.74□□□□□ -1.17
SBNO1-202ENST00000420886 V9GYY5 206 aaPredicted RBP7.74□□□□□ -1.17
SBNO1-202ENST00000420886 GOLGA6L7A0A1B0GV03 622 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 LIG1P18858 919 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 FAM193AP78312 1265 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 TBC1D2Q9BYX2 928 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 ARID3CA6NKF2 412 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 H3BQV1 296 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 IFFO2Q5TF58 517 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 ANKRD20A12PQ8NF67 263 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 TNPO1Q92973 898 aaKnown RBP7.73□□□□□ -1.17
SBNO1-202ENST00000420886 MNAT1P51948 309 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 UBXN4Q92575 508 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 CDC45O75419 566 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 PTPN14Q15678 1187 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 NOL8Q76FK4 1167 aaKnown RBP7.73□□□□□ -1.17
SBNO1-202ENST00000420886 TIAM1Q13009 1591 aa7.73□□□□□ -1.17
SBNO1-202ENST00000420886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.73□□□□□ -1.173e-7■■□□□ 13.7
SBNO1-202ENST00000420886 RGL3Q3MIN7 710 aa7.72□□□□□ -1.17
SBNO1-202ENST00000420886 MORC1Q86VD1 984 aa7.72□□□□□ -1.17
SBNO1-202ENST00000420886 DZIP1LQ8IYY4 767 aaKnown RBP7.72□□□□□ -1.17
SBNO1-202ENST00000420886 A0A1B0GUL7 405 aa7.72□□□□□ -1.17
SBNO1-202ENST00000420886 NF2P35240 595 aa7.72□□□□□ -1.17
SBNO1-202ENST00000420886 UVSSAQ2YD98 709 aa7.72□□□□□ -1.17
SBNO1-202ENST00000420886 PNISRQ8TF01 805 aaKnown RBP7.72□□□□□ -1.17
SBNO1-202ENST00000420886 HOOK1Q9UJC3 728 aaKnown RBP7.72□□□□□ -1.17
SBNO1-202ENST00000420886 SHTN1A0MZ66 631 aa7.72□□□□□ -1.17
SBNO1-202ENST00000420886 LRRC9Q6ZRR7 1453 aa7.72□□□□□ -1.17
SBNO1-202ENST00000420886 RSPH4AQ5TD94 716 aa7.72□□□□□ -1.17
SBNO1-202ENST00000420886 NEMFO60524 1076 aa7.72□□□□□ -1.17
SBNO1-202ENST00000420886 NOLC1Q14978 699 aaKnown RBP eCLIP7.72□□□□□ -1.17
SBNO1-202ENST00000420886 CCDC146Q8IYE0 955 aa7.71□□□□□ -1.17
SBNO1-202ENST00000420886 PRDM2Q13029 1718 aa7.71□□□□□ -1.17
SBNO1-202ENST00000420886 TEX2Q8IWB9 1127 aa7.71□□□□□ -1.17
SBNO1-202ENST00000420886 BICD2Q8TD16 824 aa7.71□□□□□ -1.17
SBNO1-202ENST00000420886 SARNPP82979 210 aaKnown RBP7.71□□□□□ -1.17
SBNO1-202ENST00000420886 TRERF1Q96PN7 1200 aa7.71□□□□□ -1.17
SBNO1-202ENST00000420886 NEFHP12036 1026 aa7.71□□□□□ -1.18
SBNO1-202ENST00000420886 TNNT1P13805 278 aa7.71□□□□□ -1.18
SBNO1-202ENST00000420886 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.18
SBNO1-202ENST00000420886 NPHP1O15259 732 aa7.71□□□□□ -1.18
SBNO1-202ENST00000420886 ZSCAN23Q3MJ62 389 aa7.71□□□□□ -1.18
SBNO1-202ENST00000420886 WDR33Q9C0J8 1336 aaKnown RBP7.71□□□□□ -1.18
SBNO1-202ENST00000420886 PLEKHH1Q9ULM0 1364 aa7.71□□□□□ -1.18
SBNO1-202ENST00000420886 TBC1D32Q96NH3 1257 aa7.71□□□□□ -1.18
SBNO1-202ENST00000420886 GBP3Q9H0R5 595 aa7.71□□□□□ -1.18
SBNO1-202ENST00000420886 IPO7O95373 1038 aaKnown RBP7.71□□□□□ -1.18
SBNO1-202ENST00000420886 NCBP3Q53F19 620 aaKnown RBP7.71□□□□□ -1.18
SBNO1-202ENST00000420886 PAIP2Q9BPZ3 127 aaKnown RBP7.71□□□□□ -1.18
SBNO1-202ENST00000420886 NKTRP30414 1462 aaKnown RBP7.71□□□□□ -1.18
SBNO1-202ENST00000420886 CCDC183Q5T5S1 534 aa7.71□□□□□ -1.18
SBNO1-202ENST00000420886 MCM3P25205 808 aa7.7□□□□□ -1.18
SBNO1-202ENST00000420886 LUZP1Q86V48 1076 aa7.7□□□□□ -1.18
SBNO1-202ENST00000420886 STK11IPQ8N1F8 1099 aa7.7□□□□□ -1.18
SBNO1-202ENST00000420886 MICALCLQ6ZW33 695 aa7.7□□□□□ -1.18
SBNO1-202ENST00000420886 SMC3Q9UQE7 1217 aa7.7□□□□□ -1.18
SBNO1-202ENST00000420886 CT47B1P0C2W7 299 aaPredicted RBP7.7□□□□□ -1.18
SBNO1-202ENST00000420886 DHX29Q7Z478 1369 aaKnown RBP7.7□□□□□ -1.18
SBNO1-202ENST00000420886 KIAA1328Q86T90 577 aa7.7□□□□□ -1.18
SBNO1-202ENST00000420886 GORABQ5T7V8 394 aa7.7□□□□□ -1.18
SBNO1-202ENST00000420886 LRRCC1Q9C099 1032 aa7.7□□□□□ -1.18
SBNO1-202ENST00000420886 CPSF2Q9P2I0 782 aaKnown RBP7.7□□□□□ -1.18
SBNO1-202ENST00000420886 LRSAM1Q6UWE0 723 aa7.7□□□□□ -1.18
SBNO1-202ENST00000420886 CCDC9Q9Y3X0 531 aaKnown RBP7.7□□□□□ -1.18
SBNO1-202ENST00000420886 SF3A1Q15459 793 aaKnown RBP7.7□□□□□ -1.18
SBNO1-202ENST00000420886 BANK1Q8NDB2 785 aa7.7□□□□□ -1.18
SBNO1-202ENST00000420886 ZNF397Q8NF99 534 aaPredicted RBP7.7□□□□□ -1.18
SBNO1-202ENST00000420886 C16orf45Q96MC5 204 aaPredicted RBP7.69□□□□□ -1.18
SBNO1-202ENST00000420886 SMC2O95347 1197 aa7.69□□□□□ -1.18
SBNO1-202ENST00000420886 MAP9Q49MG5 647 aa7.69□□□□□ -1.18
SBNO1-202ENST00000420886 PDCP20941 246 aa7.69□□□□□ -1.18
SBNO1-202ENST00000420886 FOXD1Q16676 465 aa7.69□□□□□ -1.18
SBNO1-202ENST00000420886 GOLGA6L10A6NI86 522 aa7.69□□□□□ -1.18
SBNO1-202ENST00000420886 CCDC171Q6TFL3 1326 aa7.69□□□□□ -1.18
SBNO1-202ENST00000420886 ZRSR2Q15696 482 aaKnown RBP7.69□□□□□ -1.18
SBNO1-202ENST00000420886 PPM1EQ8WY54 764 aa7.69□□□□□ -1.18
SBNO1-202ENST00000420886 APBB1O00213 710 aa7.69□□□□□ -1.18
SBNO1-202ENST00000420886 ADCY5O95622 1261 aa7.69□□□□□ -1.18
SBNO1-202ENST00000420886 IQCEQ6IPM2 695 aa7.69□□□□□ -1.18
SBNO1-202ENST00000420886 EFCC1Q9HA90 598 aa7.69□□□□□ -1.18
SBNO1-202ENST00000420886 ZNF500O60304 480 aaPredicted RBP7.68□□□□□ -1.18
SBNO1-202ENST00000420886 KIF21AQ7Z4S6 1674 aa7.68□□□□□ -1.18
SBNO1-202ENST00000420886 POLR3GO15318 223 aaPredicted RBP7.68□□□□□ -1.18
SBNO1-202ENST00000420886 PANK1Q8TE04 598 aa7.68□□□□□ -1.18
SBNO1-202ENST00000420886 STK31Q9BXU1 1019 aa7.68□□□□□ -1.18
SBNO1-202ENST00000420886 PDZRN3Q9UPQ7 1066 aa7.68□□□□□ -1.18
SBNO1-202ENST00000420886 SMARCA4P51532 1647 aa7.68□□□□□ -1.18
SBNO1-202ENST00000420886 MAP3K1Q13233 1512 aa7.68□□□□□ -1.18
SBNO1-202ENST00000420886 CCDC102AQ96A19 550 aa7.68□□□□□ -1.18
SBNO1-202ENST00000420886 POTEB2H3BUK9 544 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms