RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 MORN1Q5T089 497 aa8.42□□□□□ -1.06
LINC01646-201ENST00000420522 TSR3Q9UJK0 312 aaKnown RBP8.42□□□□□ -1.06
LINC01646-201ENST00000420522 HPS5Q9UPZ3 1129 aa8.42□□□□□ -1.06
LINC01646-201ENST00000420522 AP1G2O75843 785 aa8.41□□□□□ -1.06
LINC01646-201ENST00000420522 MTMR14Q8NCE2 650 aa8.41□□□□□ -1.06
LINC01646-201ENST00000420522 C6orf229H3BNL8 230 aa8.4□□□□□ -1.06
LINC01646-201ENST00000420522 APLP1P51693 650 aa8.4□□□□□ -1.06
LINC01646-201ENST00000420522 PUS10Q3MIT2 529 aaKnown RBP8.4□□□□□ -1.06
LINC01646-201ENST00000420522 POM121Q96HA1 1249 aa8.4□□□□□ -1.06
LINC01646-201ENST00000420522 SLC27A5Q9Y2P5 690 aa8.4□□□□□ -1.06
LINC01646-201ENST00000420522 CFAP99D6REC4 459 aa8.39□□□□□ -1.07
LINC01646-201ENST00000420522 RAD21O60216 631 aa8.39□□□□□ -1.07
LINC01646-201ENST00000420522 USP17L8P0C7I0 530 aa8.39□□□□□ -1.07
LINC01646-201ENST00000420522 SYMPKQ92797 1274 aaKnown RBP8.39□□□□□ -1.07
LINC01646-201ENST00000420522 COG6Q9Y2V7 657 aa8.39□□□□□ -1.07
LINC01646-201ENST00000420522 TRAK2O60296 914 aa8.38□□□□□ -1.07
LINC01646-201ENST00000420522 Q3C1V9 767 aa8.38□□□□□ -1.07
LINC01646-201ENST00000420522 CTDSPL2Q05D32 466 aa8.37□□□□□ -1.07
LINC01646-201ENST00000420522 PROSER2Q86WR7 435 aaPredicted RBP8.37□□□□□ -1.07
LINC01646-201ENST00000420522 FNBP4Q8N3X1 1017 aaPredicted RBP8.37□□□□□ -1.07
LINC01646-201ENST00000420522 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
LINC01646-201ENST00000420522 APBB1O00213 710 aa8.36□□□□□ -1.07
LINC01646-201ENST00000420522 THSD4Q6ZMP0 1018 aa8.36□□□□□ -1.07
LINC01646-201ENST00000420522 RETREG3Q86VR2 466 aa8.36□□□□□ -1.07
LINC01646-201ENST00000420522 PRR7Q8TB68 274 aa8.36□□□□□ -1.07
LINC01646-201ENST00000420522 WBP1LQ9NX94 342 aa8.36□□□□□ -1.07
LINC01646-201ENST00000420522 SALL2Q9Y467 1007 aaPredicted RBP8.35□□□□□ -1.07
LINC01646-201ENST00000420522 PCDHB3Q9Y5E6 796 aa8.35□□□□□ -1.07
LINC01646-201ENST00000420522 BRICD5Q6PL45 260 aa8.34□□□□□ -1.07
LINC01646-201ENST00000420522 POTEGQ6S5H5 508 aa8.34□□□□□ -1.07
LINC01646-201ENST00000420522 CDAN1Q8IWY9 1227 aa8.34□□□□□ -1.07
LINC01646-201ENST00000420522 SCUBE3Q8IX30 993 aa8.34□□□□□ -1.07
LINC01646-201ENST00000420522 TSC1Q92574 1164 aa8.34□□□□□ -1.07
LINC01646-201ENST00000420522 GJD4Q96KN9 370 aaPredicted RBP8.34□□□□□ -1.07
LINC01646-201ENST00000420522 C1orf115Q9H7X2 142 aa8.34□□□□□ -1.07
LINC01646-201ENST00000420522 NR1I2O75469 434 aa8.33□□□□□ -1.08
LINC01646-201ENST00000420522 DESI1Q6ICB0 168 aa8.33□□□□□ -1.08
LINC01646-201ENST00000420522 BLOC1S3Q6QNY0 202 aa8.33□□□□□ -1.08
LINC01646-201ENST00000420522 RNF19BQ6ZMZ0 732 aa8.33□□□□□ -1.08
LINC01646-201ENST00000420522 KCTD12Q96CX2 325 aaKnown RBP8.33□□□□□ -1.08
LINC01646-201ENST00000420522 THAP11Q96EK4 314 aa8.33□□□□□ -1.08
LINC01646-201ENST00000420522 GDPD2Q9HCC8 539 aa8.33□□□□□ -1.08
LINC01646-201ENST00000420522 PRM3Q9NNZ6 103 aa8.33□□□□□ -1.08
LINC01646-201ENST00000420522 POTEMA6NI47 508 aa8.32□□□□□ -1.08
LINC01646-201ENST00000420522 ARID3CA6NKF2 412 aa8.32□□□□□ -1.08
LINC01646-201ENST00000420522 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
LINC01646-201ENST00000420522 USB1Q9BQ65 265 aaKnown RBP8.32□□□□□ -1.08
LINC01646-201ENST00000420522 HMX1Q9NP08 348 aaPredicted RBP8.32□□□□□ -1.08
LINC01646-201ENST00000420522 NYAP1Q6ZVC0 841 aa8.31□□□□□ -1.08
LINC01646-201ENST00000420522 TRIM34Q9BYJ4 488 aa8.31□□□□□ -1.08
LINC01646-201ENST00000420522 TBC1D2BQ9UPU7 963 aa8.31□□□□□ -1.08
LINC01646-201ENST00000420522 FMNL1O95466 1100 aaPredicted RBP8.3□□□□□ -1.08
LINC01646-201ENST00000420522 ARXQ96QS3 562 aa8.3□□□□□ -1.08
LINC01646-201ENST00000420522 NDUFB9Q9Y6M9 179 aa8.3□□□□□ -1.08
LINC01646-201ENST00000420522 PER1O15534 1290 aaPredicted RBP8.29□□□□□ -1.08
LINC01646-201ENST00000420522 ABL2P42684 1182 aa8.29□□□□□ -1.08
LINC01646-201ENST00000420522 LYPD8Q6UX82 237 aa8.28□□□□□ -1.08
LINC01646-201ENST00000420522 ZNF777Q9ULD5 760 aaPredicted RBP8.28□□□□□ -1.08
LINC01646-201ENST00000420522 ZNF330Q9Y3S2 320 aaPredicted RBP8.28□□□□□ -1.08
LINC01646-201ENST00000420522 GPR37L1O60883 481 aa8.27□□□□□ -1.09
LINC01646-201ENST00000420522 WWC1Q8IX03 1113 aa8.27□□□□□ -1.09
LINC01646-201ENST00000420522 COPS2P61201 443 aa8.26□□□□□ -1.09
LINC01646-201ENST00000420522 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
LINC01646-201ENST00000420522 JUNDP17535 347 aa8.25□□□□□ -1.09
LINC01646-201ENST00000420522 IRF5Q13568 498 aa8.25□□□□□ -1.09
LINC01646-201ENST00000420522 NR6A1Q15406 480 aa8.25□□□□□ -1.09
LINC01646-201ENST00000420522 MSS51Q4VC12 460 aa8.25□□□□□ -1.09
LINC01646-201ENST00000420522 FAM160A2Q8N612 972 aaPredicted RBP8.25□□□□□ -1.09
LINC01646-201ENST00000420522 SPSB2Q99619 263 aa8.25□□□□□ -1.09
LINC01646-201ENST00000420522 PTPN5P54829 565 aa8.24□□□□□ -1.09
LINC01646-201ENST00000420522 MTRQ99707 1265 aa8.24□□□□□ -1.09
LINC01646-201ENST00000420522 ZPR1O75312 459 aa8.23□□□□□ -1.09
LINC01646-201ENST00000420522 PTPRNQ16849 979 aa8.23□□□□□ -1.09
LINC01646-201ENST00000420522 CCDC82Q8N4S0 544 aa8.23□□□□□ -1.09
LINC01646-201ENST00000420522 PLSCR2Q9NRY7 297 aa8.23□□□□□ -1.09
LINC01646-201ENST00000420522 MYT1LQ9UL68 1186 aa8.23□□□□□ -1.09
LINC01646-201ENST00000420522 DXOO77932 396 aaKnown RBP8.22□□□□□ -1.09
LINC01646-201ENST00000420522 F12P00748 615 aaPredicted RBP8.22□□□□□ -1.09
LINC01646-201ENST00000420522 MMP16P51512 607 aa8.22□□□□□ -1.09
LINC01646-201ENST00000420522 TJAP1Q5JTD0 557 aa8.22□□□□□ -1.09
LINC01646-201ENST00000420522 ARID3AQ99856 593 aa8.22□□□□□ -1.09
LINC01646-201ENST00000420522 WASHC4Q2M389 1173 aa8.21□□□□□ -1.1
LINC01646-201ENST00000420522 IL21Q9HBE4 155 aa8.21□□□□□ -1.1
LINC01646-201ENST00000420522 POM121CA8CG34 1229 aa8.2□□□□□ -1.1
LINC01646-201ENST00000420522 TLL1O43897 1013 aa8.2□□□□□ -1.1
LINC01646-201ENST00000420522 ADH1BP00325 375 aa8.2□□□□□ -1.1
LINC01646-201ENST00000420522 HOMEZQ8IX15 550 aa8.2□□□□□ -1.1
LINC01646-201ENST00000420522 PNMA1Q8ND90 353 aa8.19□□□□□ -1.1
LINC01646-201ENST00000420522 ZNF516Q92618 1163 aa8.19□□□□□ -1.1
LINC01646-201ENST00000420522 PRDM9Q9NQV7 894 aa8.19□□□□□ -1.1
LINC01646-201ENST00000420522 MAP10Q9P2G4 905 aa8.19□□□□□ -1.1
LINC01646-201ENST00000420522 SERPINA10Q9UK55 444 aa8.19□□□□□ -1.1
LINC01646-201ENST00000420522 CCNYL3P0C7X3 344 aa8.18□□□□□ -1.1
LINC01646-201ENST00000420522 GLMNQ92990 594 aa8.18□□□□□ -1.1
LINC01646-201ENST00000420522 EVA1BQ9NVM1 165 aa8.18□□□□□ -1.1
LINC01646-201ENST00000420522 FKBPLQ9UIM3 349 aa8.18□□□□□ -1.1
LINC01646-201ENST00000420522 VAC14Q08AM6 782 aa8.17□□□□□ -1.1
LINC01646-201ENST00000420522 CCDC97Q96F63 343 aaPredicted RBP8.17□□□□□ -1.1
LINC01646-201ENST00000420522 CALR3Q96L12 384 aaKnown RBP8.17□□□□□ -1.1
LINC01646-201ENST00000420522 NUDT12Q9BQG2 462 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms