RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 PLEKHH1Q9ULM0 1364 aa22.27■■□□□ 1.16
NUP50-204ENST00000417702 LRRC59Q96AG4 307 aaKnown RBP22.26■■□□□ 1.15
NUP50-204ENST00000417702 ORAI2Q96SN7 254 aa22.26■■□□□ 1.15
NUP50-204ENST00000417702 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
NUP50-204ENST00000417702 SOCS7O14512 581 aa22.25■■□□□ 1.15
NUP50-204ENST00000417702 DDX17Q92841 729 aaKnown RBP22.25■■□□□ 1.15
NUP50-204ENST00000417702 ESCO1Q5FWF5 840 aa22.23■■□□□ 1.15
NUP50-204ENST00000417702 PRAM1Q96QH2 718 aa22.23■■□□□ 1.15
NUP50-204ENST00000417702 POGKQ9P215 609 aa22.23■■□□□ 1.15
NUP50-204ENST00000417702 NHSL1Q5SYE7 1610 aa22.22■■□□□ 1.15
NUP50-204ENST00000417702 MEX3CQ5U5Q3 659 aaKnown RBP22.22■■□□□ 1.15
NUP50-204ENST00000417702 NUTM2FA1L443 756 aa22.21■■□□□ 1.15
NUP50-204ENST00000417702 RGS17Q9UGC6 210 aaPredicted RBP22.21■■□□□ 1.15
NUP50-204ENST00000417702 SAFB2Q14151 953 aaKnown RBP eCLIP22.2■■□□□ 1.14
NUP50-204ENST00000417702 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
NUP50-204ENST00000417702 ADGRB1O14514 1584 aa22.19■■□□□ 1.14
NUP50-204ENST00000417702 SHPRHQ149N8 1683 aa22.19■■□□□ 1.14
NUP50-204ENST00000417702 DLC1Q96QB1 1528 aa22.18■■□□□ 1.14
NUP50-204ENST00000417702 SOS2Q07890 1332 aaPredicted RBP22.18■■□□□ 1.14
NUP50-204ENST00000417702 NUTM2BA6NNL0 878 aaPredicted RBP22.18■■□□□ 1.14
NUP50-204ENST00000417702 NUTM2EB1AL46 878 aaPredicted RBP22.18■■□□□ 1.14
NUP50-204ENST00000417702 NUTM2AQ8IVF1 878 aaPredicted RBP22.18■■□□□ 1.14
NUP50-204ENST00000417702 NPHP3Q7Z494 1330 aa22.17■■□□□ 1.14
NUP50-204ENST00000417702 TRIM26Q12899 539 aaPredicted RBP22.16■■□□□ 1.14
NUP50-204ENST00000417702 LRP6O75581 1613 aa22.15■■□□□ 1.14
NUP50-204ENST00000417702 PNPLA6Q8IY17 1366 aa22.14■■□□□ 1.14
NUP50-204ENST00000417702 FOXO3O43524 673 aa22.14■■□□□ 1.13
NUP50-204ENST00000417702 POTEAQ6S8J7 498 aa22.12■■□□□ 1.13
NUP50-204ENST00000417702 FMN2Q9NZ56 1722 aa22.11■■□□□ 1.13
NUP50-204ENST00000417702 SIN3AQ96ST3 1273 aa22.11■■□□□ 1.13
NUP50-204ENST00000417702 NEUROD1Q13562 356 aa22.1■■□□□ 1.13
NUP50-204ENST00000417702 ZNF772Q68DY9 489 aaPredicted RBP22.1■■□□□ 1.13
NUP50-204ENST00000417702 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
NUP50-204ENST00000417702 XPCQ01831 940 aaPredicted RBP22.09■■□□□ 1.13
NUP50-204ENST00000417702 HIRIP3Q9BW71 556 aaPredicted RBP22.09■■□□□ 1.13
NUP50-204ENST00000417702 PHF8Q9UPP1 1060 aa22.09■■□□□ 1.13
NUP50-204ENST00000417702 L3MBTL2Q969R5 705 aa22.08■■□□□ 1.13
NUP50-204ENST00000417702 EIF3AQ14152 1382 aaKnown RBP22.06■■□□□ 1.12
NUP50-204ENST00000417702 PXDNQ92626 1479 aa22.06■■□□□ 1.12
NUP50-204ENST00000417702 ANKARQ7Z5J8 1434 aa22.06■■□□□ 1.12
NUP50-204ENST00000417702 KIF1AQ12756 1690 aa22.04■■□□□ 1.12
NUP50-204ENST00000417702 ADGRB2O60241 1585 aa22.04■■□□□ 1.12
NUP50-204ENST00000417702 KIAA1210Q9ULL0 1709 aa22.04■■□□□ 1.12
NUP50-204ENST00000417702 WASLO00401 505 aaPredicted RBP22.04■■□□□ 1.12
NUP50-204ENST00000417702 ADAMTS2O95450 1211 aa22.04■■□□□ 1.12
NUP50-204ENST00000417702 NBPF1Q3BBV0 1214 aa22.04■■□□□ 1.12
NUP50-204ENST00000417702 KRT28Q7Z3Y7 464 aa22.04■■□□□ 1.12
NUP50-204ENST00000417702 PSME1Q06323 249 aa22.03■■□□□ 1.12
NUP50-204ENST00000417702 C8orf37Q96NL8 207 aa22.03■■□□□ 1.12
NUP50-204ENST00000417702 AFF2P51816 1311 aa22.03■■□□□ 1.12
NUP50-204ENST00000417702 PMFBP1Q8TBY8 1022 aa22■■□□□ 1.11
NUP50-204ENST00000417702 NGLY1Q96IV0 654 aa22■■□□□ 1.11
NUP50-204ENST00000417702 SPATA31A3Q5VYP0 1347 aa22■■□□□ 1.11
NUP50-204ENST00000417702 ARHGEF28Q8N1W1 1705 aaKnown RBP22■■□□□ 1.11
NUP50-204ENST00000417702 RGPD8O14715 1765 aaPredicted RBP21.99■■□□□ 1.11
NUP50-204ENST00000417702 TULP4Q9NRJ4 1543 aa21.97■■□□□ 1.11
NUP50-204ENST00000417702 COL22A1Q8NFW1 1626 aaPredicted RBP21.97■■□□□ 1.11
NUP50-204ENST00000417702 PRR36Q9H6K5 1346 aa21.97■■□□□ 1.11
NUP50-204ENST00000417702 RXRBP28702 533 aa21.96■■□□□ 1.11
NUP50-204ENST00000417702 USP32Q8NFA0 1604 aa21.95■■□□□ 1.1
NUP50-204ENST00000417702 CDK19Q9BWU1 502 aa21.95■■□□□ 1.1
NUP50-204ENST00000417702 SBNO1A3KN83 1393 aa21.95■■□□□ 1.1
NUP50-204ENST00000417702 LMOD2Q6P5Q4 547 aa21.94■■□□□ 1.1
NUP50-204ENST00000417702 NGDNQ8NEJ9 315 aaKnown RBP21.94■■□□□ 1.1
NUP50-204ENST00000417702 NUDT16Q96DE0 195 aaKnown RBP21.94■■□□□ 1.1
NUP50-204ENST00000417702 CENPJQ9HC77 1338 aaPredicted RBP21.94■■□□□ 1.1
NUP50-204ENST00000417702 GPRASP1Q5JY77 1395 aa21.94■■□□□ 1.1
NUP50-204ENST00000417702 TNS3Q68CZ2 1445 aa21.94■■□□□ 1.1
NUP50-204ENST00000417702 HAP1P54257 671 aaPredicted RBP21.92■■□□□ 1.1
NUP50-204ENST00000417702 QTRT2Q9H974 415 aaKnown RBP21.92■■□□□ 1.1
NUP50-204ENST00000417702 ARHGEF10O15013 1369 aa21.91■■□□□ 1.1
NUP50-204ENST00000417702 ROCK2O75116 1388 aaKnown RBP21.91■■□□□ 1.1
NUP50-204ENST00000417702 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
NUP50-204ENST00000417702 USP21Q9UK80 565 aa21.91■■□□□ 1.1
NUP50-204ENST00000417702 FNBP4Q8N3X1 1017 aaPredicted RBP21.9■■□□□ 1.1
NUP50-204ENST00000417702 CCDC61Q9Y6R9 512 aa21.89■■□□□ 1.09
NUP50-204ENST00000417702 RBM6P78332 1123 aaKnown RBP21.88■■□□□ 1.09
NUP50-204ENST00000417702 ATP7BP35670 1465 aa21.88■■□□□ 1.09
NUP50-204ENST00000417702 PLEKHG5O94827 1062 aa21.87■■□□□ 1.09
NUP50-204ENST00000417702 SRPK2P78362 688 aaKnown RBP21.87■■□□□ 1.09
NUP50-204ENST00000417702 TRPC5Q9UL62 973 aaPredicted RBP21.87■■□□□ 1.09
NUP50-204ENST00000417702 TRPM1Q7Z4N2 1603 aa21.87■■□□□ 1.09
NUP50-204ENST00000417702 NBPF8Q3BBV2 869 aa21.86■■□□□ 1.09
NUP50-204ENST00000417702 CABLES1Q8TDN4 633 aa21.86■■□□□ 1.09
NUP50-204ENST00000417702 PAK3O75914 559 aaPredicted RBP21.85■■□□□ 1.09
NUP50-204ENST00000417702 ITSN1Q15811 1721 aa21.84■■□□□ 1.09
NUP50-204ENST00000417702 CDK12Q9NYV4 1490 aaPredicted RBP21.83■■□□□ 1.09
NUP50-204ENST00000417702 PLEKHG3A1L390 1219 aa21.82■■□□□ 1.08
NUP50-204ENST00000417702 CABP2Q9NPB3 220 aa21.82■■□□□ 1.08
NUP50-204ENST00000417702 ACEP12821 1306 aa21.81■■□□□ 1.08
NUP50-204ENST00000417702 EVC2Q86UK5 1308 aa21.8■■□□□ 1.08
NUP50-204ENST00000417702 MARF1Q9Y4F3 1742 aaKnown RBP21.8■■□□□ 1.08
NUP50-204ENST00000417702 QRICH2Q9H0J4 1663 aa21.8■■□□□ 1.08
NUP50-204ENST00000417702 POLR3AO14802 1390 aaPredicted RBP21.8■■□□□ 1.08
NUP50-204ENST00000417702 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
NUP50-204ENST00000417702 TRPM3Q9HCF6 1732 aaPredicted RBP21.8■■□□□ 1.08
NUP50-204ENST00000417702 BCL9LQ86UU0 1499 aa21.79■■□□□ 1.08
NUP50-204ENST00000417702 ATRNO75882 1429 aa21.79■■□□□ 1.08
NUP50-204ENST00000417702 UNC5CLQ8IV45 518 aa21.78■■□□□ 1.08
NUP50-204ENST00000417702 PPIP5K1Q6PFW1 1433 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms