RNA–Protein interactions for RNA: ENST00000416078.1

NCLP2-201, Transcript of nucleolin pseudogene 2, humanhuman

BASIC

Gene NCLP2, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP2-201ENST00000416078 NACADO15069 1562 aa9.65□□□□□ -0.86
NCLP2-201ENST00000416078 SLC27A5Q9Y2P5 690 aa9.65□□□□□ -0.87
NCLP2-201ENST00000416078 RB1CC1Q8TDY2 1594 aa9.64□□□□□ -0.87
NCLP2-201ENST00000416078 MS4A1P11836 297 aa9.64□□□□□ -0.87
NCLP2-201ENST00000416078 MYO15BQ96JP2 1530 aa9.63□□□□□ -0.87
NCLP2-201ENST00000416078 GGCXP38435 758 aa9.61□□□□□ -0.87
NCLP2-201ENST00000416078 BRICD5Q6PL45 260 aa9.61□□□□□ -0.87
NCLP2-201ENST00000416078 SPIRE2Q8WWL2 714 aa9.61□□□□□ -0.87
NCLP2-201ENST00000416078 SPSB2Q99619 263 aa9.61□□□□□ -0.87
NCLP2-201ENST00000416078 BEGAINQ9BUH8 593 aa9.61□□□□□ -0.87
NCLP2-201ENST00000416078 DCAF1Q9Y4B6 1507 aa9.6□□□□□ -0.87
NCLP2-201ENST00000416078 FMNL1O95466 1100 aaPredicted RBP9.6□□□□□ -0.87
NCLP2-201ENST00000416078 Q3C1V9 767 aa9.6□□□□□ -0.87
NCLP2-201ENST00000416078 NUTM1Q86Y26 1132 aa9.6□□□□□ -0.87
NCLP2-201ENST00000416078 MSS51Q4VC12 460 aa9.59□□□□□ -0.87
NCLP2-201ENST00000416078 DIXDC1Q155Q3 683 aa9.59□□□□□ -0.87
NCLP2-201ENST00000416078 RNF19BQ6ZMZ0 732 aa9.59□□□□□ -0.87
NCLP2-201ENST00000416078 HLA-CQ95604 372 aa9.59□□□□□ -0.87
NCLP2-201ENST00000416078 S1PR4O95977 384 aa9.58□□□□□ -0.88
NCLP2-201ENST00000416078 GJA5P36382 358 aa9.58□□□□□ -0.88
NCLP2-201ENST00000416078 SLC6A16Q9GZN6 736 aa9.58□□□□□ -0.88
NCLP2-201ENST00000416078 RNF223E7ERA6 249 aa9.57□□□□□ -0.88
NCLP2-201ENST00000416078 ANKLE1Q8NAG6 615 aa9.57□□□□□ -0.88
NCLP2-201ENST00000416078 NFX1Q12986 1120 aaKnown RBP9.56□□□□□ -0.88
NCLP2-201ENST00000416078 FAM160A2Q8N612 972 aaPredicted RBP9.56□□□□□ -0.88
NCLP2-201ENST00000416078 PRR20EP86478 221 aa9.55□□□□□ -0.88
NCLP2-201ENST00000416078 PRR20CP86479 221 aa9.55□□□□□ -0.88
NCLP2-201ENST00000416078 PRR20DP86480 221 aa9.55□□□□□ -0.88
NCLP2-201ENST00000416078 PRR20BP86481 221 aa9.55□□□□□ -0.88
NCLP2-201ENST00000416078 PRR20AP86496 221 aa9.55□□□□□ -0.88
NCLP2-201ENST00000416078 GUCA2AQ02747 115 aa9.55□□□□□ -0.88
NCLP2-201ENST00000416078 TBC1D2Q9BYX2 928 aa9.55□□□□□ -0.88
NCLP2-201ENST00000416078 MOXD2PA6NHM9 499 aa9.54□□□□□ -0.88
NCLP2-201ENST00000416078 FDX1P10109 184 aa9.54□□□□□ -0.88
NCLP2-201ENST00000416078 TPRNQ4KMQ1 711 aa9.54□□□□□ -0.88
NCLP2-201ENST00000416078 TRIM67Q6ZTA4 783 aa9.53□□□□□ -0.88
NCLP2-201ENST00000416078 KDM4CQ9H3R0 1056 aa9.53□□□□□ -0.88
NCLP2-201ENST00000416078 PCDHGC3Q9UN70 934 aa9.53□□□□□ -0.88
NCLP2-201ENST00000416078 MMP16P51512 607 aa9.53□□□□□ -0.88
NCLP2-201ENST00000416078 RSBN1LQ6PCB5 846 aaPredicted RBP9.53□□□□□ -0.88
NCLP2-201ENST00000416078 USB1Q9BQ65 265 aaKnown RBP9.53□□□□□ -0.88
NCLP2-201ENST00000416078 SPTLC1O15269 473 aa9.52□□□□□ -0.89
NCLP2-201ENST00000416078 GPBP1L1Q9HC44 474 aaPredicted RBP9.52□□□□□ -0.89
NCLP2-201ENST00000416078 NDUFV2P19404 249 aa9.51□□□□□ -0.89
NCLP2-201ENST00000416078 TUSC1Q2TAM9 212 aa9.51□□□□□ -0.89
NCLP2-201ENST00000416078 RETREG3Q86VR2 466 aa9.51□□□□□ -0.89
NCLP2-201ENST00000416078 EMID1Q96A84 441 aaPredicted RBP9.51□□□□□ -0.89
NCLP2-201ENST00000416078 PRDM9Q9NQV7 894 aa9.51□□□□□ -0.89
NCLP2-201ENST00000416078 DXOO77932 396 aaKnown RBP9.5□□□□□ -0.89
NCLP2-201ENST00000416078 MYSM1Q5VVJ2 828 aa9.5□□□□□ -0.89
NCLP2-201ENST00000416078 PPEF1O14829 653 aaPredicted RBP9.49□□□□□ -0.89
NCLP2-201ENST00000416078 DDRGK1Q96HY6 314 aa9.48□□□□□ -0.89
NCLP2-201ENST00000416078 PLA2G2CQ5R387 149 aa9.47□□□□□ -0.89
NCLP2-201ENST00000416078 AAASQ9NRG9 546 aa9.47□□□□□ -0.89
NCLP2-201ENST00000416078 SPDYE5A6NIY4 337 aa9.47□□□□□ -0.89
NCLP2-201ENST00000416078 JUNDP17535 347 aa9.47□□□□□ -0.89
NCLP2-201ENST00000416078 PRPF38BQ5VTL8 546 aaKnown RBP9.47□□□□□ -0.89
NCLP2-201ENST00000416078 RIC3Q7Z5B4 369 aa9.47□□□□□ -0.89
NCLP2-201ENST00000416078 SYMPKQ92797 1274 aaKnown RBP9.47□□□□□ -0.89
NCLP2-201ENST00000416078 FCF1Q9Y324 198 aaKnown RBP9.47□□□□□ -0.89
NCLP2-201ENST00000416078 MTMR2Q13614 643 aa9.46□□□□□ -0.9
NCLP2-201ENST00000416078 FAM117AQ9C073 453 aa9.46□□□□□ -0.9
NCLP2-201ENST00000416078 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
NCLP2-201ENST00000416078 PLEKHG3A1L390 1219 aa9.45□□□□□ -0.9
NCLP2-201ENST00000416078 FAM187AA6NFU0 413 aa9.45□□□□□ -0.9
NCLP2-201ENST00000416078 C6orf229H3BNL8 230 aa9.45□□□□□ -0.9
NCLP2-201ENST00000416078 LIMD1Q9UGP4 676 aa9.45□□□□□ -0.9
NCLP2-201ENST00000416078 SLC19A1P41440 591 aa9.44□□□□□ -0.9
NCLP2-201ENST00000416078 BRPF1P55201 1214 aaPredicted RBP9.44□□□□□ -0.9
NCLP2-201ENST00000416078 SH3D19Q5HYK7 790 aa9.44□□□□□ -0.9
NCLP2-201ENST00000416078 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
NCLP2-201ENST00000416078 PCDHB15Q9Y5E8 787 aa9.44□□□□□ -0.9
NCLP2-201ENST00000416078 UNC13AQ9UPW8 1703 aa9.44□□□□□ -0.9
NCLP2-201ENST00000416078 RPIAP49247 311 aa9.43□□□□□ -0.9
NCLP2-201ENST00000416078 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
NCLP2-201ENST00000416078 SPRYD7Q5W111 196 aa9.43□□□□□ -0.9
NCLP2-201ENST00000416078 DESI1Q6ICB0 168 aa9.43□□□□□ -0.9
NCLP2-201ENST00000416078 ZBTB3Q9H5J0 574 aa9.43□□□□□ -0.9
NCLP2-201ENST00000416078 HRCP23327 699 aa9.41□□□□□ -0.9
NCLP2-201ENST00000416078 NEUROD2Q15784 382 aa9.41□□□□□ -0.9
NCLP2-201ENST00000416078 ZNF598Q86UK7 904 aaKnown RBP9.41□□□□□ -0.9
NCLP2-201ENST00000416078 LILRB3O75022 631 aa9.4□□□□□ -0.9
NCLP2-201ENST00000416078 CRIPAKQ8N1N5 446 aa9.4□□□□□ -0.9
NCLP2-201ENST00000416078 PRR7Q8TB68 274 aa9.4□□□□□ -0.9
NCLP2-201ENST00000416078 C11orf95C9JLR9 678 aaPredicted RBP9.4□□□□□ -0.91
NCLP2-201ENST00000416078 SKIV2LQ15477 1246 aaKnown RBP9.4□□□□□ -0.91
NCLP2-201ENST00000416078 ST8SIA5O15466 376 aa9.39□□□□□ -0.91
NCLP2-201ENST00000416078 PTPRNQ16849 979 aa9.39□□□□□ -0.91
NCLP2-201ENST00000416078 CFAP99D6REC4 459 aa9.38□□□□□ -0.91
NCLP2-201ENST00000416078 QPCTQ16769 361 aa9.38□□□□□ -0.91
NCLP2-201ENST00000416078 CABLES1Q8TDN4 633 aa9.38□□□□□ -0.91
NCLP2-201ENST00000416078 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.38□□□□□ -0.91
NCLP2-201ENST00000416078 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
NCLP2-201ENST00000416078 NUDT12Q9BQG2 462 aa9.37□□□□□ -0.91
NCLP2-201ENST00000416078 SCRIBQ14160 1630 aa9.36□□□□□ -0.91
NCLP2-201ENST00000416078 CCNYL3P0C7X3 344 aa9.35□□□□□ -0.91
NCLP2-201ENST00000416078 CSPP1Q1MSJ5 1256 aa9.35□□□□□ -0.91
NCLP2-201ENST00000416078 ZNF697Q5TEC3 545 aa9.35□□□□□ -0.91
NCLP2-201ENST00000416078 POLR3EQ9NVU0 708 aa9.35□□□□□ -0.91
NCLP2-201ENST00000416078 TERTO14746 1132 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms