RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 KNDC1Q76NI1 1749 aa38.35■■■■□ 3.73
VEGFA-207ENST00000413642 NUTM2FA1L443 756 aa38.35■■■■□ 3.73
VEGFA-207ENST00000413642 LAMC1P11047 1609 aa38.34■■■■□ 3.73
VEGFA-207ENST00000413642 CDC42BPGQ6DT37 1551 aa38.32■■■■□ 3.73
VEGFA-207ENST00000413642 SAFB2Q14151 953 aaKnown RBP eCLIP38.32■■■■□ 3.72
VEGFA-207ENST00000413642 PRAM1Q96QH2 718 aa38.32■■■■□ 3.72
VEGFA-207ENST00000413642 SOCS7O14512 581 aa38.31■■■■□ 3.72
VEGFA-207ENST00000413642 ADGRB1O14514 1584 aa38.31■■■■□ 3.72
VEGFA-207ENST00000413642 NHSL1Q5SYE7 1610 aa38.3■■■■□ 3.72
VEGFA-207ENST00000413642 STAC3Q96MF2 364 aa38.3■■■■□ 3.72
VEGFA-207ENST00000413642 ESCO1Q5FWF5 840 aa38.29■■■■□ 3.72
VEGFA-207ENST00000413642 SPATA31A6Q5VVP1 1343 aa38.29■■■■□ 3.72
VEGFA-207ENST00000413642 LRP6O75581 1613 aa38.28■■■■□ 3.72
VEGFA-207ENST00000413642 TRAK1Q9UPV9 953 aa38.28■■■■□ 3.72
VEGFA-207ENST00000413642 LRRC59Q96AG4 307 aaKnown RBP38.27■■■■□ 3.72
VEGFA-207ENST00000413642 NUTM2BA6NNL0 878 aaPredicted RBP38.24■■■■□ 3.71
VEGFA-207ENST00000413642 NUTM2EB1AL46 878 aaPredicted RBP38.24■■■■□ 3.71
VEGFA-207ENST00000413642 NUTM2AQ8IVF1 878 aaPredicted RBP38.24■■■■□ 3.71
VEGFA-207ENST00000413642 SIN3AQ96ST3 1273 aa38.23■■■■□ 3.71
VEGFA-207ENST00000413642 POGKQ9P215 609 aa38.23■■■■□ 3.71
VEGFA-207ENST00000413642 SHPRHQ149N8 1683 aa38.21■■■■□ 3.71
VEGFA-207ENST00000413642 SOS2Q07890 1332 aaPredicted RBP38.21■■■■□ 3.71
VEGFA-207ENST00000413642 POTEAQ6S8J7 498 aa38.21■■■■□ 3.71
VEGFA-207ENST00000413642 DLC1Q96QB1 1528 aa38.2■■■■□ 3.71
VEGFA-207ENST00000413642 PNPLA6Q8IY17 1366 aa38.19■■■■□ 3.7
VEGFA-207ENST00000413642 MEX3CQ5U5Q3 659 aaKnown RBP38.18■■■■□ 3.7
VEGFA-207ENST00000413642 FOXO3O43524 673 aa38.17■■■■□ 3.7
VEGFA-207ENST00000413642 XPCQ01831 940 aaPredicted RBP38.16■■■■□ 3.7
VEGFA-207ENST00000413642 TRIM26Q12899 539 aaPredicted RBP38.14■■■■□ 3.7
VEGFA-207ENST00000413642 HIRIP3Q9BW71 556 aaPredicted RBP38.13■■■■□ 3.69
VEGFA-207ENST00000413642 FMN2Q9NZ56 1722 aa38.12■■■■□ 3.69
VEGFA-207ENST00000413642 NEUROD1Q13562 356 aa38.12■■■■□ 3.69
VEGFA-207ENST00000413642 L3MBTL2Q969R5 705 aa38.11■■■■□ 3.69
VEGFA-207ENST00000413642 NPHP3Q7Z494 1330 aa38.11■■■■□ 3.69
VEGFA-207ENST00000413642 MINK1Q8N4C8 1332 aaPredicted RBP38.11■■■■□ 3.69
VEGFA-207ENST00000413642 NBPF1Q3BBV0 1214 aa38.09■■■■□ 3.69
VEGFA-207ENST00000413642 PXDNQ92626 1479 aa38.06■■■■□ 3.68
VEGFA-207ENST00000413642 PHF8Q9UPP1 1060 aa38.03■■■■□ 3.68
VEGFA-207ENST00000413642 ADAMTS2O95450 1211 aa37.99■■■■□ 3.67
VEGFA-207ENST00000413642 ADGRB2O60241 1585 aa37.97■■■■□ 3.67
VEGFA-207ENST00000413642 KRT28Q7Z3Y7 464 aa37.97■■■■□ 3.67
VEGFA-207ENST00000413642 C8orf37Q96NL8 207 aa37.97■■■■□ 3.67
VEGFA-207ENST00000413642 PRR36Q9H6K5 1346 aa37.96■■■■□ 3.67
VEGFA-207ENST00000413642 WASLO00401 505 aaPredicted RBP37.96■■■■□ 3.67
VEGFA-207ENST00000413642 PMFBP1Q8TBY8 1022 aa37.96■■■■□ 3.67
VEGFA-207ENST00000413642 AFF2P51816 1311 aa37.95■■■■□ 3.67
VEGFA-207ENST00000413642 ZNF772Q68DY9 489 aaPredicted RBP37.95■■■■□ 3.67
VEGFA-207ENST00000413642 ANKARQ7Z5J8 1434 aa37.94■■■■□ 3.66
VEGFA-207ENST00000413642 USP32Q8NFA0 1604 aa37.94■■■■□ 3.66
VEGFA-207ENST00000413642 RGPD8O14715 1765 aaPredicted RBP37.93■■■■□ 3.66
VEGFA-207ENST00000413642 ARHGEF28Q8N1W1 1705 aaKnown RBP37.92■■■■□ 3.66
VEGFA-207ENST00000413642 KIAA1210Q9ULL0 1709 aa37.92■■■■□ 3.66
VEGFA-207ENST00000413642 KIF1AQ12756 1690 aa37.92■■■■□ 3.66
VEGFA-207ENST00000413642 SPATA31A3Q5VYP0 1347 aa37.89■■■■□ 3.66
VEGFA-207ENST00000413642 PSME1Q06323 249 aa37.86■■■■□ 3.65
VEGFA-207ENST00000413642 NGLY1Q96IV0 654 aa37.86■■■■□ 3.65
VEGFA-207ENST00000413642 COL22A1Q8NFW1 1626 aaPredicted RBP37.86■■■■□ 3.65
VEGFA-207ENST00000413642 TULP4Q9NRJ4 1543 aa37.85■■■■□ 3.65
VEGFA-207ENST00000413642 EIF3AQ14152 1382 aaKnown RBP37.83■■■■□ 3.65
VEGFA-207ENST00000413642 CDK19Q9BWU1 502 aa37.83■■■■□ 3.65
VEGFA-207ENST00000413642 NBPF8Q3BBV2 869 aa37.81■■■■□ 3.64
VEGFA-207ENST00000413642 PLEKHG5O94827 1062 aa37.8■■■■□ 3.64
VEGFA-207ENST00000413642 NUDT16Q96DE0 195 aaKnown RBP37.8■■■■□ 3.64
VEGFA-207ENST00000413642 LMOD2Q6P5Q4 547 aa37.78■■■■□ 3.64
VEGFA-207ENST00000413642 TNS3Q68CZ2 1445 aa37.78■■■■□ 3.64
VEGFA-207ENST00000413642 CENPJQ9HC77 1338 aaPredicted RBP37.77■■■■□ 3.64
VEGFA-207ENST00000413642 RXRBP28702 533 aa37.76■■■■□ 3.64
VEGFA-207ENST00000413642 CABLES1Q8TDN4 633 aa37.76■■■■□ 3.64
VEGFA-207ENST00000413642 QTRT2Q9H974 415 aaKnown RBP37.76■■■■□ 3.64
VEGFA-207ENST00000413642 SBNO1A3KN83 1393 aa37.76■■■■□ 3.64
VEGFA-207ENST00000413642 ATP7BP35670 1465 aa37.75■■■■□ 3.63
VEGFA-207ENST00000413642 NGDNQ8NEJ9 315 aaKnown RBP37.73■■■■□ 3.63
VEGFA-207ENST00000413642 USP21Q9UK80 565 aa37.72■■■■□ 3.63
VEGFA-207ENST00000413642 TRPM1Q7Z4N2 1603 aa37.72■■■■□ 3.63
VEGFA-207ENST00000413642 ROCK2O75116 1388 aaKnown RBP37.71■■■■□ 3.63
VEGFA-207ENST00000413642 FNBP4Q8N3X1 1017 aaPredicted RBP37.71■■■■□ 3.63
VEGFA-207ENST00000413642 GPRASP1Q5JY77 1395 aa37.7■■■■□ 3.63
VEGFA-207ENST00000413642 TONSLQ96HA7 1378 aa37.68■■■■□ 3.62
VEGFA-207ENST00000413642 CABP2Q9NPB3 220 aa37.65■■■■□ 3.62
VEGFA-207ENST00000413642 ARHGEF10O15013 1369 aa37.65■■■■□ 3.62
VEGFA-207ENST00000413642 HAP1P54257 671 aaPredicted RBP37.64■■■■□ 3.62
VEGFA-207ENST00000413642 SRPK2P78362 688 aaKnown RBP37.64■■■■□ 3.62
VEGFA-207ENST00000413642 CCDC61Q9Y6R9 512 aa37.64■■■■□ 3.62
VEGFA-207ENST00000413642 RBM6P78332 1123 aaKnown RBP37.63■■■■□ 3.61
VEGFA-207ENST00000413642 PAK3O75914 559 aaPredicted RBP37.62■■■■□ 3.61
VEGFA-207ENST00000413642 TRPM3Q9HCF6 1732 aaPredicted RBP37.61■■■■□ 3.61
VEGFA-207ENST00000413642 BCL9LQ86UU0 1499 aa37.6■■■■□ 3.61
VEGFA-207ENST00000413642 ACEP12821 1306 aa37.6■■■■□ 3.61
VEGFA-207ENST00000413642 TRPC5Q9UL62 973 aaPredicted RBP37.59■■■■□ 3.61
VEGFA-207ENST00000413642 PLEKHG3A1L390 1219 aa37.58■■■■□ 3.61
VEGFA-207ENST00000413642 QRICH2Q9H0J4 1663 aa37.57■■■■□ 3.61
VEGFA-207ENST00000413642 ATRNO75882 1429 aa37.56■■■■□ 3.6
VEGFA-207ENST00000413642 POLR3AO14802 1390 aaPredicted RBP37.55■■■■□ 3.6
VEGFA-207ENST00000413642 RGS12O14924 1447 aa37.54■■■■□ 3.6
VEGFA-207ENST00000413642 CDK12Q9NYV4 1490 aaPredicted RBP37.54■■■■□ 3.6
VEGFA-207ENST00000413642 ITSN1Q15811 1721 aa37.54■■■■□ 3.6
VEGFA-207ENST00000413642 TOPAZ1Q8N9V7 1692 aa37.53■■■■□ 3.6
VEGFA-207ENST00000413642 MARF1Q9Y4F3 1742 aaKnown RBP37.53■■■■□ 3.6
VEGFA-207ENST00000413642 CARD11Q9BXL7 1154 aa37.53■■■■□ 3.6
VEGFA-207ENST00000413642 PCGF6Q9BYE7 350 aa37.53■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms