RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 DLC1Q96QB1 1528 aa22.85■■□□□ 1.25
MCF2L-211ENST00000413354 KDM2AQ9Y2K7 1162 aa22.84■■□□□ 1.25
MCF2L-211ENST00000413354 ADGRB1O14514 1584 aa22.84■■□□□ 1.25
MCF2L-211ENST00000413354 WAPLQ7Z5K2 1190 aa22.83■■□□□ 1.25
MCF2L-211ENST00000413354 SPATA31A6Q5VVP1 1343 aa22.82■■□□□ 1.24
MCF2L-211ENST00000413354 FMN2Q9NZ56 1722 aa22.82■■□□□ 1.24
MCF2L-211ENST00000413354 PLEKHH1Q9ULM0 1364 aa22.81■■□□□ 1.24
MCF2L-211ENST00000413354 KIAA1210Q9ULL0 1709 aa22.79■■□□□ 1.24
MCF2L-211ENST00000413354 LRRC59Q96AG4 307 aaKnown RBP22.77■■□□□ 1.24
MCF2L-211ENST00000413354 ORAI2Q96SN7 254 aa22.76■■□□□ 1.23
MCF2L-211ENST00000413354 KIF1AQ12756 1690 aa22.76■■□□□ 1.23
MCF2L-211ENST00000413354 ADGRB2O60241 1585 aa22.76■■□□□ 1.23
MCF2L-211ENST00000413354 PRAM1Q96QH2 718 aa22.75■■□□□ 1.23
MCF2L-211ENST00000413354 POGKQ9P215 609 aa22.75■■□□□ 1.23
MCF2L-211ENST00000413354 ARHGEF28Q8N1W1 1705 aaKnown RBP22.74■■□□□ 1.23
MCF2L-211ENST00000413354 LRP6O75581 1613 aa22.73■■□□□ 1.23
MCF2L-211ENST00000413354 SOCS7O14512 581 aa22.73■■□□□ 1.23
MCF2L-211ENST00000413354 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
MCF2L-211ENST00000413354 ESCO1Q5FWF5 840 aa22.73■■□□□ 1.23
MCF2L-211ENST00000413354 NPHP3Q7Z494 1330 aa22.73■■□□□ 1.23
MCF2L-211ENST00000413354 DDX17Q92841 729 aaKnown RBP22.72■■□□□ 1.23
MCF2L-211ENST00000413354 SOS2Q07890 1332 aaPredicted RBP22.72■■□□□ 1.23
MCF2L-211ENST00000413354 MEX3CQ5U5Q3 659 aaKnown RBP22.71■■□□□ 1.23
MCF2L-211ENST00000413354 TRAK1Q9UPV9 953 aa22.71■■□□□ 1.23
MCF2L-211ENST00000413354 PNPLA6Q8IY17 1366 aa22.71■■□□□ 1.23
MCF2L-211ENST00000413354 RGPD8O14715 1765 aaPredicted RBP22.71■■□□□ 1.23
MCF2L-211ENST00000413354 SAFB2Q14151 953 aaKnown RBP eCLIP22.69■■□□□ 1.22
MCF2L-211ENST00000413354 EIF3AQ14152 1382 aaKnown RBP22.68■■□□□ 1.22
MCF2L-211ENST00000413354 NUTM2FA1L443 756 aa22.68■■□□□ 1.22
MCF2L-211ENST00000413354 RGS17Q9UGC6 210 aaPredicted RBP22.68■■□□□ 1.22
MCF2L-211ENST00000413354 PXDNQ92626 1479 aa22.67■■□□□ 1.22
MCF2L-211ENST00000413354 ANKARQ7Z5J8 1434 aa22.67■■□□□ 1.22
MCF2L-211ENST00000413354 COL22A1Q8NFW1 1626 aaPredicted RBP22.66■■□□□ 1.22
MCF2L-211ENST00000413354 NUTM2BA6NNL0 878 aaPredicted RBP22.64■■□□□ 1.21
MCF2L-211ENST00000413354 NUTM2EB1AL46 878 aaPredicted RBP22.64■■□□□ 1.21
MCF2L-211ENST00000413354 NUTM2AQ8IVF1 878 aaPredicted RBP22.64■■□□□ 1.21
MCF2L-211ENST00000413354 FOXO3O43524 673 aa22.63■■□□□ 1.21
MCF2L-211ENST00000413354 USP32Q8NFA0 1604 aa22.63■■□□□ 1.21
MCF2L-211ENST00000413354 TULP4Q9NRJ4 1543 aa22.62■■□□□ 1.21
MCF2L-211ENST00000413354 SIN3AQ96ST3 1273 aa22.62■■□□□ 1.21
MCF2L-211ENST00000413354 MINK1Q8N4C8 1332 aaPredicted RBP22.61■■□□□ 1.21
MCF2L-211ENST00000413354 ZNF772Q68DY9 489 aaPredicted RBP22.61■■□□□ 1.21
MCF2L-211ENST00000413354 L3MBTL2Q969R5 705 aa22.61■■□□□ 1.21
MCF2L-211ENST00000413354 ITSN1Q15811 1721 aa22.6■■□□□ 1.21
MCF2L-211ENST00000413354 NEUROD1Q13562 356 aa22.6■■□□□ 1.21
MCF2L-211ENST00000413354 PHF8Q9UPP1 1060 aa22.6■■□□□ 1.21
MCF2L-211ENST00000413354 POTEAQ6S8J7 498 aa22.59■■□□□ 1.21
MCF2L-211ENST00000413354 HIRIP3Q9BW71 556 aaPredicted RBP22.59■■□□□ 1.21
MCF2L-211ENST00000413354 TRPM1Q7Z4N2 1603 aa22.59■■□□□ 1.21
MCF2L-211ENST00000413354 WASLO00401 505 aaPredicted RBP22.57■■□□□ 1.2
MCF2L-211ENST00000413354 XPCQ01831 940 aaPredicted RBP22.57■■□□□ 1.2
MCF2L-211ENST00000413354 MARF1Q9Y4F3 1742 aaKnown RBP22.56■■□□□ 1.2
MCF2L-211ENST00000413354 PSME1Q06323 249 aa22.55■■□□□ 1.2
MCF2L-211ENST00000413354 NBPF1Q3BBV0 1214 aa22.55■■□□□ 1.2
MCF2L-211ENST00000413354 KRT28Q7Z3Y7 464 aa22.54■■□□□ 1.2
MCF2L-211ENST00000413354 TNS3Q68CZ2 1445 aa22.54■■□□□ 1.2
MCF2L-211ENST00000413354 AFF2P51816 1311 aa22.54■■□□□ 1.2
MCF2L-211ENST00000413354 C8orf37Q96NL8 207 aa22.53■■□□□ 1.2
MCF2L-211ENST00000413354 SPATA31A3Q5VYP0 1347 aa22.53■■□□□ 1.2
MCF2L-211ENST00000413354 QRICH2Q9H0J4 1663 aa22.52■■□□□ 1.2
MCF2L-211ENST00000413354 SBNO1A3KN83 1393 aa22.52■■□□□ 1.2
MCF2L-211ENST00000413354 ADAMTS2O95450 1211 aa22.51■■□□□ 1.19
MCF2L-211ENST00000413354 ATP7BP35670 1465 aa22.51■■□□□ 1.19
MCF2L-211ENST00000413354 PRR36Q9H6K5 1346 aa22.5■■□□□ 1.19
MCF2L-211ENST00000413354 CENPJQ9HC77 1338 aaPredicted RBP22.5■■□□□ 1.19
MCF2L-211ENST00000413354 TONSLQ96HA7 1378 aa22.5■■□□□ 1.19
MCF2L-211ENST00000413354 TOPAZ1Q8N9V7 1692 aa22.49■■□□□ 1.19
MCF2L-211ENST00000413354 TRPM3Q9HCF6 1732 aaPredicted RBP22.49■■□□□ 1.19
MCF2L-211ENST00000413354 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
MCF2L-211ENST00000413354 ARHGEF10O15013 1369 aa22.49■■□□□ 1.19
MCF2L-211ENST00000413354 ROCK2O75116 1388 aaKnown RBP22.49■■□□□ 1.19
MCF2L-211ENST00000413354 GPRASP1Q5JY77 1395 aa22.49■■□□□ 1.19
MCF2L-211ENST00000413354 NGLY1Q96IV0 654 aa22.48■■□□□ 1.19
MCF2L-211ENST00000413354 ABCA3Q99758 1704 aa22.45■■□□□ 1.19
MCF2L-211ENST00000413354 NUDT16Q96DE0 195 aaKnown RBP22.45■■□□□ 1.18
MCF2L-211ENST00000413354 CDK19Q9BWU1 502 aa22.45■■□□□ 1.18
MCF2L-211ENST00000413354 ALS2Q96Q42 1657 aa22.45■■□□□ 1.18
MCF2L-211ENST00000413354 RXRBP28702 533 aa22.44■■□□□ 1.18
MCF2L-211ENST00000413354 NGDNQ8NEJ9 315 aaKnown RBP22.44■■□□□ 1.18
MCF2L-211ENST00000413354 CDK12Q9NYV4 1490 aaPredicted RBP22.44■■□□□ 1.18
MCF2L-211ENST00000413354 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.41■■□□□ 1.18
MCF2L-211ENST00000413354 HAP1P54257 671 aaPredicted RBP22.41■■□□□ 1.18
MCF2L-211ENST00000413354 LMOD2Q6P5Q4 547 aa22.41■■□□□ 1.18
MCF2L-211ENST00000413354 FNBP4Q8N3X1 1017 aaPredicted RBP22.41■■□□□ 1.18
MCF2L-211ENST00000413354 CCDC61Q9Y6R9 512 aa22.41■■□□□ 1.18
MCF2L-211ENST00000413354 RALGAPBQ86X10 1494 aa22.41■■□□□ 1.18
MCF2L-211ENST00000413354 QTRT2Q9H974 415 aaKnown RBP22.4■■□□□ 1.18
MCF2L-211ENST00000413354 USP21Q9UK80 565 aa22.4■■□□□ 1.18
MCF2L-211ENST00000413354 SRPK2P78362 688 aaKnown RBP22.39■■□□□ 1.17
MCF2L-211ENST00000413354 NBPF8Q3BBV2 869 aa22.39■■□□□ 1.17
MCF2L-211ENST00000413354 RBM6P78332 1123 aaKnown RBP22.38■■□□□ 1.17
MCF2L-211ENST00000413354 TRPC5Q9UL62 973 aaPredicted RBP22.38■■□□□ 1.17
MCF2L-211ENST00000413354 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
MCF2L-211ENST00000413354 ATRNO75882 1429 aa22.36■■□□□ 1.17
MCF2L-211ENST00000413354 NWD2Q9ULI1 1742 aa22.36■■□□□ 1.17
MCF2L-211ENST00000413354 EVC2Q86UK5 1308 aa22.35■■□□□ 1.17
MCF2L-211ENST00000413354 CRYBG1Q9Y4K1 1723 aa22.35■■□□□ 1.17
MCF2L-211ENST00000413354 PPIP5K1Q6PFW1 1433 aa22.35■■□□□ 1.17
MCF2L-211ENST00000413354 PLEKHG3A1L390 1219 aa22.35■■□□□ 1.17
MCF2L-211ENST00000413354 PLCH1Q4KWH8 1693 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms