RNA–Protein interactions for RNA: ENST00000412887.5

PDCD6IP-202, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 3

Gene PDCD6IP, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-202ENST00000412887 RNF223E7ERA6 249 aa8.5□□□□□ -1.05
PDCD6IP-202ENST00000412887 BRPF1P55201 1214 aaPredicted RBP8.5□□□□□ -1.05
PDCD6IP-202ENST00000412887 MYSM1Q5VVJ2 828 aa8.5□□□□□ -1.05
PDCD6IP-202ENST00000412887 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
PDCD6IP-202ENST00000412887 PRDM9Q9NQV7 894 aa8.5□□□□□ -1.05
PDCD6IP-202ENST00000412887 PPEF1O14829 653 aaPredicted RBP8.49□□□□□ -1.05
PDCD6IP-202ENST00000412887 RSBN1LQ6PCB5 846 aaPredicted RBP8.49□□□□□ -1.05
PDCD6IP-202ENST00000412887 USB1Q9BQ65 265 aaKnown RBP8.49□□□□□ -1.05
PDCD6IP-202ENST00000412887 SPTLC1O15269 473 aa8.48□□□□□ -1.05
PDCD6IP-202ENST00000412887 MSS51Q4VC12 460 aa8.48□□□□□ -1.05
PDCD6IP-202ENST00000412887 RIC3Q7Z5B4 369 aa8.48□□□□□ -1.05
PDCD6IP-202ENST00000412887 PLEKHG3A1L390 1219 aa8.47□□□□□ -1.05
PDCD6IP-202ENST00000412887 C6orf229H3BNL8 230 aa8.47□□□□□ -1.05
PDCD6IP-202ENST00000412887 RGS20O76081 388 aa8.47□□□□□ -1.05
PDCD6IP-202ENST00000412887 GJA5P36382 358 aa8.47□□□□□ -1.05
PDCD6IP-202ENST00000412887 DDRGK1Q96HY6 314 aa8.47□□□□□ -1.05
PDCD6IP-202ENST00000412887 LIMD1Q9UGP4 676 aa8.47□□□□□ -1.05
PDCD6IP-202ENST00000412887 PCDHB15Q9Y5E8 787 aa8.47□□□□□ -1.05
PDCD6IP-202ENST00000412887 ANKLE1Q8NAG6 615 aa8.46□□□□□ -1.06
PDCD6IP-202ENST00000412887 CSPP1Q1MSJ5 1256 aa8.45□□□□□ -1.06
PDCD6IP-202ENST00000412887 RETREG3Q86VR2 466 aa8.45□□□□□ -1.06
PDCD6IP-202ENST00000412887 RSPH6AQ9H0K4 717 aa8.45□□□□□ -1.06
PDCD6IP-202ENST00000412887 MTMR2Q13614 643 aa8.44□□□□□ -1.06
PDCD6IP-202ENST00000412887 ERICH6Q7L0X2 663 aa8.44□□□□□ -1.06
PDCD6IP-202ENST00000412887 PRKD2Q9BZL6 878 aa8.44□□□□□ -1.06
PDCD6IP-202ENST00000412887 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
PDCD6IP-202ENST00000412887 DXOO77932 396 aaKnown RBP8.43□□□□□ -1.06
PDCD6IP-202ENST00000412887 CLK2P49760 499 aaKnown RBP8.43□□□□□ -1.06
PDCD6IP-202ENST00000412887 MMP16P51512 607 aa8.43□□□□□ -1.06
PDCD6IP-202ENST00000412887 PLA2G2CQ5R387 149 aa8.43□□□□□ -1.06
PDCD6IP-202ENST00000412887 FCF1Q9Y324 198 aaKnown RBP8.43□□□□□ -1.06
PDCD6IP-202ENST00000412887 HRCP23327 699 aa8.42□□□□□ -1.06
PDCD6IP-202ENST00000412887 IL27Q8NEV9 243 aa8.42□□□□□ -1.06
PDCD6IP-202ENST00000412887 CABLES1Q8TDN4 633 aa8.42□□□□□ -1.06
PDCD6IP-202ENST00000412887 EMID1Q96A84 441 aaPredicted RBP8.42□□□□□ -1.06
PDCD6IP-202ENST00000412887 ZBTB3Q9H5J0 574 aa8.42□□□□□ -1.06
PDCD6IP-202ENST00000412887 TIMELESSQ9UNS1 1208 aa8.42□□□□□ -1.06
PDCD6IP-202ENST00000412887 SPDYE5A6NIY4 337 aa8.41□□□□□ -1.06
PDCD6IP-202ENST00000412887 JUNDP17535 347 aa8.41□□□□□ -1.06
PDCD6IP-202ENST00000412887 SKIV2LQ15477 1246 aaKnown RBP8.41□□□□□ -1.06
PDCD6IP-202ENST00000412887 QPCTQ16769 361 aa8.41□□□□□ -1.06
PDCD6IP-202ENST00000412887 TUSC1Q2TAM9 212 aa8.41□□□□□ -1.06
PDCD6IP-202ENST00000412887 SH3D19Q5HYK7 790 aa8.41□□□□□ -1.06
PDCD6IP-202ENST00000412887 PRR7Q8TB68 274 aa8.41□□□□□ -1.06
PDCD6IP-202ENST00000412887 V9GY48 417 aaPredicted RBP8.41□□□□□ -1.06
PDCD6IP-202ENST00000412887 PRPF38BQ5VTL8 546 aaKnown RBP8.4□□□□□ -1.06
PDCD6IP-202ENST00000412887 CFAP99D6REC4 459 aa8.39□□□□□ -1.07
PDCD6IP-202ENST00000412887 LILRB3O75022 631 aa8.39□□□□□ -1.07
PDCD6IP-202ENST00000412887 SLC19A1P41440 591 aa8.39□□□□□ -1.07
PDCD6IP-202ENST00000412887 LIAT1Q6ZQX7 453 aa8.39□□□□□ -1.07
PDCD6IP-202ENST00000412887 GTF3C3Q9Y5Q9 886 aa8.39□□□□□ -1.07
PDCD6IP-202ENST00000412887 NUTM2BA6NNL0 878 aaPredicted RBP8.38□□□□□ -1.07
PDCD6IP-202ENST00000412887 NUTM2EB1AL46 878 aaPredicted RBP8.38□□□□□ -1.07
PDCD6IP-202ENST00000412887 NUTM2DQ5VT03 806 aaPredicted RBP8.38□□□□□ -1.07
PDCD6IP-202ENST00000412887 NUTM2AQ8IVF1 878 aaPredicted RBP8.38□□□□□ -1.07
PDCD6IP-202ENST00000412887 PROCA1Q8NCQ7 364 aaPredicted RBP8.38□□□□□ -1.07
PDCD6IP-202ENST00000412887 ATP1B4Q9UN42 357 aaPredicted RBP8.37□□□□□ -1.07
PDCD6IP-202ENST00000412887 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
PDCD6IP-202ENST00000412887 CCDC24Q8N4L8 307 aa8.36□□□□□ -1.07
PDCD6IP-202ENST00000412887 SPRYD7Q5W111 196 aa8.35□□□□□ -1.07
PDCD6IP-202ENST00000412887 FBXO31Q5XUX0 539 aaPredicted RBP8.35□□□□□ -1.07
PDCD6IP-202ENST00000412887 DESI1Q6ICB0 168 aa8.35□□□□□ -1.07
PDCD6IP-202ENST00000412887 TSC1Q92574 1164 aa8.35□□□□□ -1.07
PDCD6IP-202ENST00000412887 NUDT12Q9BQG2 462 aa8.35□□□□□ -1.07
PDCD6IP-202ENST00000412887 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.35□□□□□ -1.07
PDCD6IP-202ENST00000412887 PTPRNQ16849 979 aa8.34□□□□□ -1.07
PDCD6IP-202ENST00000412887 ZBTB24O43167 697 aaPredicted RBP8.33□□□□□ -1.08
PDCD6IP-202ENST00000412887 CCNYL3P0C7X3 344 aa8.33□□□□□ -1.08
PDCD6IP-202ENST00000412887 RPIAP49247 311 aa8.33□□□□□ -1.08
PDCD6IP-202ENST00000412887 ARXQ96QS3 562 aa8.33□□□□□ -1.08
PDCD6IP-202ENST00000412887 GOPCQ9HD26 462 aa8.33□□□□□ -1.08
PDCD6IP-202ENST00000412887 ZNF697Q5TEC3 545 aa8.32□□□□□ -1.08
PDCD6IP-202ENST00000412887 LYPD8Q6UX82 237 aa8.32□□□□□ -1.08
PDCD6IP-202ENST00000412887 ZNF598Q86UK7 904 aaKnown RBP8.32□□□□□ -1.08
PDCD6IP-202ENST00000412887 PCMTD1Q96MG8 357 aaPredicted RBP8.32□□□□□ -1.08
PDCD6IP-202ENST00000412887 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
PDCD6IP-202ENST00000412887 PTCRAQ6ISU1 281 aaPredicted RBP8.31□□□□□ -1.08
PDCD6IP-202ENST00000412887 CD2BP2O95400 341 aaKnown RBP8.3□□□□□ -1.08
PDCD6IP-202ENST00000412887 TRIM32Q13049 653 aa8.3□□□□□ -1.08
PDCD6IP-202ENST00000412887 PPP2R2DQ66LE6 453 aa8.3□□□□□ -1.08
PDCD6IP-202ENST00000412887 HELBQ8NG08 1087 aaPredicted RBP8.3□□□□□ -1.08
PDCD6IP-202ENST00000412887 IRX2Q9BZI1 471 aaPredicted RBP8.3□□□□□ -1.08
PDCD6IP-202ENST00000412887 EVA1BQ9NVM1 165 aa8.3□□□□□ -1.08
PDCD6IP-202ENST00000412887 TMEM132AQ24JP5 1023 aa8.29□□□□□ -1.08
PDCD6IP-202ENST00000412887 TRIM67Q6ZTA4 783 aa8.29□□□□□ -1.08
PDCD6IP-202ENST00000412887 KCNH2Q12809 1159 aa8.28□□□□□ -1.08
PDCD6IP-202ENST00000412887 MAP10Q9P2G4 905 aa8.28□□□□□ -1.08
PDCD6IP-202ENST00000412887 F12P00748 615 aaPredicted RBP8.27□□□□□ -1.09
PDCD6IP-202ENST00000412887 CTHP32929 405 aa8.27□□□□□ -1.09
PDCD6IP-202ENST00000412887 RFC5P40937 340 aa8.27□□□□□ -1.09
PDCD6IP-202ENST00000412887 CTDSPL2Q05D32 466 aa8.27□□□□□ -1.09
PDCD6IP-202ENST00000412887 UNC93B1Q9H1C4 597 aa8.27□□□□□ -1.09
PDCD6IP-202ENST00000412887 PDZRN3Q9UPQ7 1066 aa8.27□□□□□ -1.09
PDCD6IP-202ENST00000412887 FOXC1Q12948 553 aa8.26□□□□□ -1.09
PDCD6IP-202ENST00000412887 PKD2L1Q9P0L9 805 aa8.26□□□□□ -1.09
PDCD6IP-202ENST00000412887 TNFRSF10AO00220 468 aa8.25□□□□□ -1.09
PDCD6IP-202ENST00000412887 GDF9O60383 454 aa8.25□□□□□ -1.09
PDCD6IP-202ENST00000412887 GFRA3O60609 400 aa8.25□□□□□ -1.09
PDCD6IP-202ENST00000412887 AP1G2O75843 785 aa8.25□□□□□ -1.09
PDCD6IP-202ENST00000412887 RB1CC1Q8TDY2 1594 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms