RNA–Protein interactions for RNA: ENST00000410720.1

RNU6-248P-201, Transcript of RNA, U6 small nuclear 248, pseudogene, humanhuman

BASIC

Gene RNU6-248P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-248P-201ENST00000410720 DIXDC1Q155Q3 683 aa8.41□□□□□ -1.06
RNU6-248P-201ENST00000410720 USB1Q9BQ65 265 aaKnown RBP8.4□□□□□ -1.06
RNU6-248P-201ENST00000410720 IRX2Q9BZI1 471 aaPredicted RBP8.4□□□□□ -1.06
RNU6-248P-201ENST00000410720 PCDHGC3Q9UN70 934 aa8.4□□□□□ -1.06
RNU6-248P-201ENST00000410720 FAM160A2Q8N612 972 aaPredicted RBP8.39□□□□□ -1.07
RNU6-248P-201ENST00000410720 FAM117AQ9C073 453 aa8.39□□□□□ -1.07
RNU6-248P-201ENST00000410720 SALL2Q9Y467 1007 aaPredicted RBP8.39□□□□□ -1.07
RNU6-248P-201ENST00000410720 RIC3Q7Z5B4 369 aa8.38□□□□□ -1.07
RNU6-248P-201ENST00000410720 PRKD2Q9BZL6 878 aa8.38□□□□□ -1.07
RNU6-248P-201ENST00000410720 MYSM1Q5VVJ2 828 aa8.37□□□□□ -1.07
RNU6-248P-201ENST00000410720 RSBN1LQ6PCB5 846 aaPredicted RBP8.37□□□□□ -1.07
RNU6-248P-201ENST00000410720 POLR3EQ9NVU0 708 aa8.37□□□□□ -1.07
RNU6-248P-201ENST00000410720 FCF1Q9Y324 198 aaKnown RBP8.37□□□□□ -1.07
RNU6-248P-201ENST00000410720 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
RNU6-248P-201ENST00000410720 ANKLE1Q8NAG6 615 aa8.36□□□□□ -1.07
RNU6-248P-201ENST00000410720 DDRGK1Q96HY6 314 aa8.36□□□□□ -1.07
RNU6-248P-201ENST00000410720 BRPF1P55201 1214 aaPredicted RBP8.35□□□□□ -1.07
RNU6-248P-201ENST00000410720 MTMR2Q13614 643 aa8.35□□□□□ -1.07
RNU6-248P-201ENST00000410720 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
RNU6-248P-201ENST00000410720 CCDC24Q8N4L8 307 aa8.35□□□□□ -1.07
RNU6-248P-201ENST00000410720 RSPH6AQ9H0K4 717 aa8.35□□□□□ -1.07
RNU6-248P-201ENST00000410720 PCDHB15Q9Y5E8 787 aa8.35□□□□□ -1.07
RNU6-248P-201ENST00000410720 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
RNU6-248P-201ENST00000410720 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
RNU6-248P-201ENST00000410720 SPTLC1O15269 473 aa8.34□□□□□ -1.07
RNU6-248P-201ENST00000410720 NUTM2DQ5VT03 806 aaPredicted RBP8.34□□□□□ -1.07
RNU6-248P-201ENST00000410720 NUTM2AQ8IVF1 878 aaPredicted RBP8.34□□□□□ -1.07
RNU6-248P-201ENST00000410720 IL27Q8NEV9 243 aa8.34□□□□□ -1.07
RNU6-248P-201ENST00000410720 TSC1Q92574 1164 aa8.34□□□□□ -1.07
RNU6-248P-201ENST00000410720 LIMD1Q9UGP4 676 aa8.34□□□□□ -1.07
RNU6-248P-201ENST00000410720 SLC19A1P41440 591 aa8.33□□□□□ -1.08
RNU6-248P-201ENST00000410720 CLK2P49760 499 aaKnown RBP8.33□□□□□ -1.08
RNU6-248P-201ENST00000410720 CABLES1Q8TDN4 633 aa8.33□□□□□ -1.08
RNU6-248P-201ENST00000410720 ZBTB3Q9H5J0 574 aa8.33□□□□□ -1.08
RNU6-248P-201ENST00000410720 PLA2G2CQ5R387 149 aa8.32□□□□□ -1.08
RNU6-248P-201ENST00000410720 PRR7Q8TB68 274 aa8.32□□□□□ -1.08
RNU6-248P-201ENST00000410720 PLEKHG3A1L390 1219 aa8.31□□□□□ -1.08
RNU6-248P-201ENST00000410720 JUNDP17535 347 aa8.31□□□□□ -1.08
RNU6-248P-201ENST00000410720 HRCP23327 699 aa8.31□□□□□ -1.08
RNU6-248P-201ENST00000410720 QPCTQ16769 361 aa8.31□□□□□ -1.08
RNU6-248P-201ENST00000410720 ZBTB24O43167 697 aaPredicted RBP8.3□□□□□ -1.08
RNU6-248P-201ENST00000410720 DXOO77932 396 aaKnown RBP8.3□□□□□ -1.08
RNU6-248P-201ENST00000410720 GJA5P36382 358 aa8.3□□□□□ -1.08
RNU6-248P-201ENST00000410720 MMP16P51512 607 aa8.3□□□□□ -1.08
RNU6-248P-201ENST00000410720 LIAT1Q6ZQX7 453 aa8.3□□□□□ -1.08
RNU6-248P-201ENST00000410720 V9GY48 417 aaPredicted RBP8.3□□□□□ -1.08
RNU6-248P-201ENST00000410720 SPDYE5A6NIY4 337 aa8.29□□□□□ -1.08
RNU6-248P-201ENST00000410720 CFAP99D6REC4 459 aa8.28□□□□□ -1.08
RNU6-248P-201ENST00000410720 SH3D19Q5HYK7 790 aa8.28□□□□□ -1.08
RNU6-248P-201ENST00000410720 EMID1Q96A84 441 aaPredicted RBP8.28□□□□□ -1.08
RNU6-248P-201ENST00000410720 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
RNU6-248P-201ENST00000410720 SKIV2LQ15477 1246 aaKnown RBP8.27□□□□□ -1.09
RNU6-248P-201ENST00000410720 PRPF38BQ5VTL8 546 aaKnown RBP8.27□□□□□ -1.09
RNU6-248P-201ENST00000410720 PROCA1Q8NCQ7 364 aaPredicted RBP8.27□□□□□ -1.09
RNU6-248P-201ENST00000410720 ZNF697Q5TEC3 545 aa8.26□□□□□ -1.09
RNU6-248P-201ENST00000410720 SPRYD7Q5W111 196 aa8.26□□□□□ -1.09
RNU6-248P-201ENST00000410720 LILRB3O75022 631 aa8.25□□□□□ -1.09
RNU6-248P-201ENST00000410720 RTL5Q5HYW3 569 aaPredicted RBP8.25□□□□□ -1.09
RNU6-248P-201ENST00000410720 CD2BP2O95400 341 aaKnown RBP8.24□□□□□ -1.09
RNU6-248P-201ENST00000410720 CCNYL3P0C7X3 344 aa8.24□□□□□ -1.09
RNU6-248P-201ENST00000410720 CTHP32929 405 aa8.24□□□□□ -1.09
RNU6-248P-201ENST00000410720 FOXC1Q12948 553 aa8.24□□□□□ -1.09
RNU6-248P-201ENST00000410720 GFRA3O60609 400 aa8.23□□□□□ -1.09
RNU6-248P-201ENST00000410720 RPIAP49247 311 aa8.23□□□□□ -1.09
RNU6-248P-201ENST00000410720 PTPRNQ16849 979 aa8.23□□□□□ -1.09
RNU6-248P-201ENST00000410720 TUSC1Q2TAM9 212 aa8.23□□□□□ -1.09
RNU6-248P-201ENST00000410720 Q6ZNB5 142 aa8.23□□□□□ -1.09
RNU6-248P-201ENST00000410720 ZNF598Q86UK7 904 aaKnown RBP8.23□□□□□ -1.09
RNU6-248P-201ENST00000410720 HELBQ8NG08 1087 aaPredicted RBP8.23□□□□□ -1.09
RNU6-248P-201ENST00000410720 PCMTD1Q96MG8 357 aaPredicted RBP8.23□□□□□ -1.09
RNU6-248P-201ENST00000410720 PDZRN3Q9UPQ7 1066 aa8.23□□□□□ -1.09
RNU6-248P-201ENST00000410720 TNFRSF10AO00220 468 aa8.22□□□□□ -1.09
RNU6-248P-201ENST00000410720 TRIM32Q13049 653 aa8.22□□□□□ -1.09
RNU6-248P-201ENST00000410720 DESI1Q6ICB0 168 aa8.21□□□□□ -1.1
RNU6-248P-201ENST00000410720 PTCRAQ6ISU1 281 aaPredicted RBP8.21□□□□□ -1.1
RNU6-248P-201ENST00000410720 PER1O15534 1290 aaPredicted RBP8.2□□□□□ -1.1
RNU6-248P-201ENST00000410720 LAPTM4AQ15012 233 aa8.2□□□□□ -1.1
RNU6-248P-201ENST00000410720 LYPD8Q6UX82 237 aa8.2□□□□□ -1.1
RNU6-248P-201ENST00000410720 LCE2BO14633 110 aa8.19□□□□□ -1.1
RNU6-248P-201ENST00000410720 AP1G2O75843 785 aa8.19□□□□□ -1.1
RNU6-248P-201ENST00000410720 FBXO31Q5XUX0 539 aaPredicted RBP8.19□□□□□ -1.1
RNU6-248P-201ENST00000410720 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.19□□□□□ -1.1
RNU6-248P-201ENST00000410720 UNC93B1Q9H1C4 597 aa8.19□□□□□ -1.1
RNU6-248P-201ENST00000410720 EVA1BQ9NVM1 165 aa8.19□□□□□ -1.1
RNU6-248P-201ENST00000410720 MAP10Q9P2G4 905 aa8.19□□□□□ -1.1
RNU6-248P-201ENST00000410720 CTDSPL2Q05D32 466 aa8.18□□□□□ -1.1
RNU6-248P-201ENST00000410720 KCNH2Q12809 1159 aa8.18□□□□□ -1.1
RNU6-248P-201ENST00000410720 LINC01559Q495D7 138 aa8.18□□□□□ -1.1
RNU6-248P-201ENST00000410720 TRIM67Q6ZTA4 783 aa8.16□□□□□ -1.1
RNU6-248P-201ENST00000410720 GOPCQ9HD26 462 aa8.16□□□□□ -1.1
RNU6-248P-201ENST00000410720 NRG2O14511 850 aaPredicted RBP8.15□□□□□ -1.1
RNU6-248P-201ENST00000410720 RFC5P40937 340 aa8.15□□□□□ -1.1
RNU6-248P-201ENST00000410720 LRRN4Q8WUT4 740 aa8.15□□□□□ -1.1
RNU6-248P-201ENST00000410720 BAP1Q92560 729 aa8.15□□□□□ -1.1
RNU6-248P-201ENST00000410720 PKD2L1Q9P0L9 805 aa8.15□□□□□ -1.1
RNU6-248P-201ENST00000410720 GDF9O60383 454 aa8.14□□□□□ -1.11
RNU6-248P-201ENST00000410720 PPP2R2DQ66LE6 453 aa8.14□□□□□ -1.11
RNU6-248P-201ENST00000410720 F12P00748 615 aaPredicted RBP8.13□□□□□ -1.11
RNU6-248P-201ENST00000410720 SKOR1P84550 965 aa8.13□□□□□ -1.11
RNU6-248P-201ENST00000410720 RC3H1Q5TC82 1133 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 252.8 ms