RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 FECHP22830 423 aa6.4□□□□□ -1.38
RNU6-1140P-201ENST00000410517 REPIN1Q9BWE0 567 aaKnown RBP6.4□□□□□ -1.38
RNU6-1140P-201ENST00000410517 PTGDRQ13258 359 aa6.39□□□□□ -1.39
RNU6-1140P-201ENST00000410517 TRIM46Q7Z4K8 759 aa6.39□□□□□ -1.39
RNU6-1140P-201ENST00000410517 WDR70Q9NW82 654 aa6.39□□□□□ -1.39
RNU6-1140P-201ENST00000410517 SLC27A5Q9Y2P5 690 aa6.39□□□□□ -1.39
RNU6-1140P-201ENST00000410517 ALDH1A1P00352 501 aa6.38□□□□□ -1.39
RNU6-1140P-201ENST00000410517 RASSF7Q02833 373 aa6.38□□□□□ -1.39
RNU6-1140P-201ENST00000410517 FUT2Q10981 343 aa6.38□□□□□ -1.39
RNU6-1140P-201ENST00000410517 RTN4Q9NQC3 1192 aaKnown RBP6.38□□□□□ -1.39
RNU6-1140P-201ENST00000410517 ATP6V1AP38606 617 aa6.37□□□□□ -1.39
RNU6-1140P-201ENST00000410517 RC3H1Q5TC82 1133 aaKnown RBP6.37□□□□□ -1.39
RNU6-1140P-201ENST00000410517 CAPN5O15484 640 aaPredicted RBP6.36□□□□□ -1.39
RNU6-1140P-201ENST00000410517 XP32Q5T750 250 aa6.36□□□□□ -1.39
RNU6-1140P-201ENST00000410517 BRICD5Q6PL45 260 aa6.36□□□□□ -1.39
RNU6-1140P-201ENST00000410517 RDH13Q8NBN7 331 aa6.36□□□□□ -1.39
RNU6-1140P-201ENST00000410517 SALL2Q9Y467 1007 aaPredicted RBP6.35□□□□□ -1.39
RNU6-1140P-201ENST00000410517 MSS51Q4VC12 460 aa6.34□□□□□ -1.39
RNU6-1140P-201ENST00000410517 NUTM2FA1L443 756 aa6.33□□□□□ -1.4
RNU6-1140P-201ENST00000410517 GPAT2Q6NUI2 795 aa6.33□□□□□ -1.4
RNU6-1140P-201ENST00000410517 RNF19BQ6ZMZ0 732 aa6.33□□□□□ -1.4
RNU6-1140P-201ENST00000410517 PXYLP1Q8TE99 480 aa6.33□□□□□ -1.4
RNU6-1140P-201ENST00000410517 ZFP42Q96MM3 310 aa6.33□□□□□ -1.4
RNU6-1140P-201ENST00000410517 OATP04181 439 aa6.32□□□□□ -1.4
RNU6-1140P-201ENST00000410517 MLLT3P42568 568 aaPredicted RBP6.32□□□□□ -1.4
RNU6-1140P-201ENST00000410517 SKOR1P84550 965 aa6.32□□□□□ -1.4
RNU6-1140P-201ENST00000410517 RNF225M0QZC1 329 aaPredicted RBP6.31□□□□□ -1.4
RNU6-1140P-201ENST00000410517 VSIG8P0DPA2 414 aa6.31□□□□□ -1.4
RNU6-1140P-201ENST00000410517 CCDC24Q8N4L8 307 aa6.31□□□□□ -1.4
RNU6-1140P-201ENST00000410517 WASF2Q9Y6W5 498 aa6.31□□□□□ -1.4
RNU6-1140P-201ENST00000410517 DDX11L8A8MPP1 907 aa6.3□□□□□ -1.4
RNU6-1140P-201ENST00000410517 WNT7BP56706 349 aa6.3□□□□□ -1.4
RNU6-1140P-201ENST00000410517 MMP16P51512 607 aa6.29□□□□□ -1.4
RNU6-1140P-201ENST00000410517 ADAMTS8Q9UP79 889 aa6.29□□□□□ -1.4
RNU6-1140P-201ENST00000410517 SOBPA7XYQ1 873 aa6.28□□□□□ -1.4
RNU6-1140P-201ENST00000410517 GCGRP47871 477 aa6.28□□□□□ -1.4
RNU6-1140P-201ENST00000410517 IGHA1P01876 353 aa6.27□□□□□ -1.41
RNU6-1140P-201ENST00000410517 METTL3Q86U44 580 aaKnown RBP6.27□□□□□ -1.41
RNU6-1140P-201ENST00000410517 DAXXQ9UER7 740 aaPredicted RBP6.27□□□□□ -1.41
RNU6-1140P-201ENST00000410517 SIAH2O43255 324 aa6.26□□□□□ -1.41
RNU6-1140P-201ENST00000410517 SLC24A1O60721 1099 aa6.26□□□□□ -1.41
RNU6-1140P-201ENST00000410517 FCHSD2O94868 740 aa6.26□□□□□ -1.41
RNU6-1140P-201ENST00000410517 SCARF1Q14162 830 aa6.26□□□□□ -1.41
RNU6-1140P-201ENST00000410517 Q3C1V9 767 aa6.26□□□□□ -1.41
RNU6-1140P-201ENST00000410517 EHBP1Q8NDI1 1231 aa6.26□□□□□ -1.41
RNU6-1140P-201ENST00000410517 DXOO77932 396 aaKnown RBP6.25□□□□□ -1.41
RNU6-1140P-201ENST00000410517 GRIPAP1Q4V328 841 aa6.25□□□□□ -1.41
RNU6-1140P-201ENST00000410517 PURBQ96QR8 312 aaKnown RBP6.25□□□□□ -1.41
RNU6-1140P-201ENST00000410517 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
RNU6-1140P-201ENST00000410517 DNMT3AQ9Y6K1 912 aaPredicted RBP6.25□□□□□ -1.41
RNU6-1140P-201ENST00000410517 IRS1P35568 1242 aa6.24□□□□□ -1.41
RNU6-1140P-201ENST00000410517 MRPL14Q6P1L8 145 aaKnown RBP6.24□□□□□ -1.41
RNU6-1140P-201ENST00000410517 USB1Q9BQ65 265 aaKnown RBP6.23□□□□□ -1.41
RNU6-1140P-201ENST00000410517 NLRP7Q8WX94 980 aa6.22□□□□□ -1.41
RNU6-1140P-201ENST00000410517 MAN1A2O60476 641 aa6.21□□□□□ -1.42
RNU6-1140P-201ENST00000410517 PPFIA3O75145 1194 aa6.21□□□□□ -1.42
RNU6-1140P-201ENST00000410517 SULF1Q8IWU6 871 aa6.21□□□□□ -1.42
RNU6-1140P-201ENST00000410517 BBXQ8WY36 941 aaPredicted RBP6.21□□□□□ -1.42
RNU6-1140P-201ENST00000410517 CNTNAP3BQ96NU0 1288 aa6.21□□□□□ -1.42
RNU6-1140P-201ENST00000410517 CNTNAP3Q9BZ76 1288 aa6.21□□□□□ -1.42
RNU6-1140P-201ENST00000410517 FOXK2Q01167 660 aa6.2□□□□□ -1.42
RNU6-1140P-201ENST00000410517 SPRYD3Q8NCJ5 442 aa6.2□□□□□ -1.42
RNU6-1140P-201ENST00000410517 KRT76Q01546 638 aa6.19□□□□□ -1.42
RNU6-1140P-201ENST00000410517 SVOPQ8N4V2 548 aa6.18□□□□□ -1.42
RNU6-1140P-201ENST00000410517 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
RNU6-1140P-201ENST00000410517 ADAM23O75077 832 aa6.17□□□□□ -1.42
RNU6-1140P-201ENST00000410517 NNTQ13423 1086 aa6.17□□□□□ -1.42
RNU6-1140P-201ENST00000410517 PSMG3-AS1Q96PY0 264 aa6.17□□□□□ -1.42
RNU6-1140P-201ENST00000410517 MARSP56192 900 aaKnown RBP6.16□□□□□ -1.42
RNU6-1140P-201ENST00000410517 WDR4P57081 412 aaKnown RBP6.16□□□□□ -1.42
RNU6-1140P-201ENST00000410517 HIC1Q14526 733 aa6.16□□□□□ -1.42
RNU6-1140P-201ENST00000410517 C6orf118Q5T5N4 469 aa6.16□□□□□ -1.42
RNU6-1140P-201ENST00000410517 ZNF385CQ66K41 422 aaPredicted RBP6.16□□□□□ -1.42
RNU6-1140P-201ENST00000410517 PTCRAQ6ISU1 281 aaPredicted RBP6.16□□□□□ -1.42
RNU6-1140P-201ENST00000410517 KANK3Q6NY19 840 aa6.16□□□□□ -1.42
RNU6-1140P-201ENST00000410517 GPR161Q8N6U8 529 aaKnown RBP6.16□□□□□ -1.42
RNU6-1140P-201ENST00000410517 ARHGEF1Q92888 912 aaKnown RBP6.16□□□□□ -1.42
RNU6-1140P-201ENST00000410517 TLL2Q9Y6L7 1015 aa6.16□□□□□ -1.42
RNU6-1140P-201ENST00000410517 TIMP2P16035 220 aa6.15□□□□□ -1.42
RNU6-1140P-201ENST00000410517 SH3BP2P78314 561 aa6.15□□□□□ -1.42
RNU6-1140P-201ENST00000410517 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.42
RNU6-1140P-201ENST00000410517 ADH1CP00326 375 aa6.14□□□□□ -1.43
RNU6-1140P-201ENST00000410517 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
RNU6-1140P-201ENST00000410517 PLEKHG3A1L390 1219 aa6.13□□□□□ -1.43
RNU6-1140P-201ENST00000410517 MSTNO14793 375 aa6.13□□□□□ -1.43
RNU6-1140P-201ENST00000410517 JUNDP17535 347 aa6.13□□□□□ -1.43
RNU6-1140P-201ENST00000410517 COL25A1Q9BXS0 654 aaPredicted RBP6.13□□□□□ -1.43
RNU6-1140P-201ENST00000410517 WHAMMQ8TF30 809 aa6.12□□□□□ -1.43
RNU6-1140P-201ENST00000410517 SCARF2Q96GP6 870 aaPredicted RBP6.12□□□□□ -1.43
RNU6-1140P-201ENST00000410517 NUDT12Q9BQG2 462 aa6.12□□□□□ -1.43
RNU6-1140P-201ENST00000410517 HLA-CQ95604 372 aa6.11□□□□□ -1.43
RNU6-1140P-201ENST00000410517 KDM4AO75164 1064 aa6.1□□□□□ -1.43
RNU6-1140P-201ENST00000410517 ARHGEF15O94989 841 aa6.1□□□□□ -1.43
RNU6-1140P-201ENST00000410517 BMP2P12643 396 aa6.1□□□□□ -1.43
RNU6-1140P-201ENST00000410517 LINC01559Q495D7 138 aa6.1□□□□□ -1.43
RNU6-1140P-201ENST00000410517 PHOX2BQ99453 314 aa6.1□□□□□ -1.43
RNU6-1140P-201ENST00000410517 GNPATO15228 680 aa6.09□□□□□ -1.43
RNU6-1140P-201ENST00000410517 RNFT1Q5M7Z0 435 aa6.09□□□□□ -1.43
RNU6-1140P-201ENST00000410517 KLF16Q9BXK1 252 aaPredicted RBP6.09□□□□□ -1.43
RNU6-1140P-201ENST00000410517 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms