RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 BRPF1P55201 1214 aaPredicted RBP6.33□□□□□ -1.4
R3HDM1-204ENST00000410054 MIPOL1Q8TD10 442 aa6.33□□□□□ -1.4
R3HDM1-204ENST00000410054 ZKSCAN2Q63HK3 967 aa6.33□□□□□ -1.4
R3HDM1-204ENST00000410054 IPO9Q96P70 1041 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-204ENST00000410054 NBPF3Q9H094 633 aa6.33□□□□□ -1.4
R3HDM1-204ENST00000410054 ERCC3P19447 782 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 LONRF3Q496Y0 759 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 ATRIPQ8WXE1 791 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 SLC26A8Q96RN1 970 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 G3BP2Q9UN86 482 aaKnown RBP6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 LOC102724159A0A0B4J2E5 919 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 BIRC2Q13490 618 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 PWP2Q15269 919 aaKnown RBP6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 SLC4A8Q2Y0W8 1093 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 GIGYF2Q6Y7W6 1299 aaKnown RBP6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 FAM114A1Q8IWE2 563 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 RGS22Q8NE09 1264 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 BRD1O95696 1058 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 RFX1P22670 979 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 SYCP1Q15431 976 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 CCDC191Q8NCU4 936 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 GTF2E1P29083 439 aaPredicted RBP6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 CALR3Q96L12 384 aaKnown RBP6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 DRC1Q96MC2 740 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 MPHOSPH6Q99547 160 aaKnown RBP6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 STK31Q9BXU1 1019 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 SLC24A3Q9HC58 644 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 SMC3Q9UQE7 1217 aa6.32□□□□□ -1.4
R3HDM1-204ENST00000410054 PLIN1O60240 522 aa6.31□□□□□ -1.4
R3HDM1-204ENST00000410054 NF2P35240 595 aa6.31□□□□□ -1.4
R3HDM1-204ENST00000410054 PRPHP41219 470 aa6.31□□□□□ -1.4
R3HDM1-204ENST00000410054 USP6NLQ92738 828 aa6.31□□□□□ -1.4
R3HDM1-204ENST00000410054 TOMM22Q9NS69 142 aa6.31□□□□□ -1.4
R3HDM1-204ENST00000410054 ZBTB22O15209 634 aa6.31□□□□□ -1.4
R3HDM1-204ENST00000410054 FOXD4Q12950 439 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-204ENST00000410054 KIAA1328Q86T90 577 aa6.31□□□□□ -1.4
R3HDM1-204ENST00000410054 ZNF692Q9BU19 519 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-204ENST00000410054 CTDP1Q9Y5B0 961 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-204ENST00000410054 TSR1Q2NL82 804 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 RNF214Q8ND24 703 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 RBM33Q96EV2 1170 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 UBAP1Q9NZ09 502 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 KRBA2Q6ZNG9 492 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 SMC4Q9NTJ3 1288 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 GOLGA6CA6NDK9 693 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 GOLGA6BA6NDN3 693 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 GOLGA6DP0CG33 693 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 MNAT1P51948 309 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 HDGFL1Q5TGJ6 251 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 FMNL3Q8IVF7 1028 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 MSL3Q8N5Y2 521 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 DNAAF4Q8WXU2 420 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 CCDC47Q96A33 483 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 RMDN2Q96LZ7 410 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 GOLGA6AQ9NYA3 693 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 HDAC9Q9UKV0 1011 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 R3HCC1Q9Y3T6 440 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 SYAP1Q96A49 352 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 RMI1Q9H9A7 625 aa6.3□□□□□ -1.4
R3HDM1-204ENST00000410054 IPO8O15397 1037 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 DCTN1Q14203 1278 aa6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 SF3A1Q15459 793 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 CCDC92Q53HC0 331 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 IRAK4Q9NWZ3 460 aa6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 RIPOR2Q9Y4F9 1068 aa6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 CEP83Q9Y592 693 aa6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 VIMP08670 466 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 RBBP5Q15291 538 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 TRIML1Q8N9V2 468 aa6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 CCDC152Q4G0S7 254 aa6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 ANKRD20A12PQ8NF67 263 aa6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 DDX49Q9Y6V7 483 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-204ENST00000410054 ATP6V1E1P36543 226 aa6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 WDR66Q8TBY9 1149 aa6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 PPME1Q9Y570 386 aa6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 ARL10Q8N8L6 244 aa6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 CCDC85AQ96PX6 553 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 MYO6Q9UM54 1294 aa6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 BLVRAP53004 296 aa6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 KIAA1211Q6ZU35 1233 aa6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 CHCHD4Q8N4Q1 142 aa6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 OTUD6BQ8N6M0 293 aa6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 ARIH1Q9Y4X5 557 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 CA8P35219 290 aa6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 PPP2R5AQ15172 486 aa6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 SEPT7Q16181 437 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 RRP12Q5JTH9 1297 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-204ENST00000410054 SHTN1A0MZ66 631 aa6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 TPM1P09493 284 aa6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 NUCB2P80303 420 aa6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 SEMA3FQ13275 785 aa6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 TMA7Q9Y2S6 64 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 ATP6V1AP38606 617 aa6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 CCDC65Q8IXS2 484 aa6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 ANKRD24Q8TF21 1146 aa6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 ERCC4Q92889 916 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 RNF216Q9NWF9 866 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 CHCHD3Q9NX63 227 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms