RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 NBPF8Q3BBV2 869 aa36.76■■■■□ 3.47
C2orf88-204ENST00000409870 COL16A1Q07092 1604 aaPredicted RBP36.74■■■■□ 3.47
C2orf88-204ENST00000409870 ATF3P18847 181 aa36.74■■■■□ 3.47
C2orf88-204ENST00000409870 STK26Q9P289 416 aa36.74■■■■□ 3.47
C2orf88-204ENST00000409870 DLC1Q96QB1 1528 aa36.73■■■■□ 3.47
C2orf88-204ENST00000409870 NBPF1Q3BBV0 1214 aa36.72■■■■□ 3.47
C2orf88-204ENST00000409870 RALGAPBQ86X10 1494 aa36.71■■■■□ 3.47
C2orf88-204ENST00000409870 NALCNQ8IZF0 1738 aa36.7■■■■□ 3.47
C2orf88-204ENST00000409870 AHDC1Q5TGY3 1603 aaPredicted RBP36.69■■■■□ 3.46
C2orf88-204ENST00000409870 ARHGEF28Q8N1W1 1705 aaKnown RBP36.66■■■■□ 3.46
C2orf88-204ENST00000409870 ADGRL3Q9HAR2 1447 aa36.65■■■■□ 3.46
C2orf88-204ENST00000409870 SIRT1Q96EB6 747 aa36.65■■■■□ 3.46
C2orf88-204ENST00000409870 ROCK2O75116 1388 aaKnown RBP36.65■■■■□ 3.46
C2orf88-204ENST00000409870 GPRASP1Q5JY77 1395 aa36.65■■■■□ 3.46
C2orf88-204ENST00000409870 JCADQ9P266 1359 aa36.63■■■■□ 3.45
C2orf88-204ENST00000409870 TRAK1Q9UPV9 953 aa36.62■■■■□ 3.45
C2orf88-204ENST00000409870 PLEKHH1Q9ULM0 1364 aa36.6■■■■□ 3.45
C2orf88-204ENST00000409870 MST1RQ04912 1400 aa36.6■■■■□ 3.45
C2orf88-204ENST00000409870 WAPLQ7Z5K2 1190 aa36.59■■■■□ 3.45
C2orf88-204ENST00000409870 SHPRHQ149N8 1683 aa36.56■■■■□ 3.44
C2orf88-204ENST00000409870 BRINP3Q76B58 766 aa36.55■■■■□ 3.44
C2orf88-204ENST00000409870 PRAM1Q96QH2 718 aa36.55■■■■□ 3.44
C2orf88-204ENST00000409870 NHSL1Q5SYE7 1610 aa36.55■■■■□ 3.44
C2orf88-204ENST00000409870 RGS17Q9UGC6 210 aaPredicted RBP36.54■■■■□ 3.44
C2orf88-204ENST00000409870 CDC42BPGQ6DT37 1551 aa36.51■■■■□ 3.44
C2orf88-204ENST00000409870 POGKQ9P215 609 aa36.51■■■■□ 3.43
C2orf88-204ENST00000409870 CARD11Q9BXL7 1154 aa36.49■■■■□ 3.43
C2orf88-204ENST00000409870 ADGRB2O60241 1585 aa36.48■■■■□ 3.43
C2orf88-204ENST00000409870 SAFB2Q14151 953 aaKnown RBP eCLIP36.45■■■■□ 3.43
C2orf88-204ENST00000409870 LRP6O75581 1613 aa36.45■■■■□ 3.43
C2orf88-204ENST00000409870 SPATA31A6Q5VVP1 1343 aa36.45■■■■□ 3.42
C2orf88-204ENST00000409870 EIF3AQ14152 1382 aaKnown RBP36.44■■■■□ 3.42
C2orf88-204ENST00000409870 QRICH2Q9H0J4 1663 aa36.43■■■■□ 3.42
C2orf88-204ENST00000409870 C1orf167Q5SNV9 1468 aa36.4■■■■□ 3.42
C2orf88-204ENST00000409870 CENPJQ9HC77 1338 aaPredicted RBP36.4■■■■□ 3.42
C2orf88-204ENST00000409870 FMN2Q9NZ56 1722 aa36.39■■■■□ 3.42
C2orf88-204ENST00000409870 MINK1Q8N4C8 1332 aaPredicted RBP36.36■■■■□ 3.41
C2orf88-204ENST00000409870 POTEAQ6S8J7 498 aa36.34■■■■□ 3.41
C2orf88-204ENST00000409870 HIRIP3Q9BW71 556 aaPredicted RBP36.32■■■■□ 3.4
C2orf88-204ENST00000409870 MEX3CQ5U5Q3 659 aaKnown RBP36.29■■■■□ 3.4
C2orf88-204ENST00000409870 USP47Q96K76 1375 aa36.29■■■■□ 3.4
C2orf88-204ENST00000409870 SBNO2Q9Y2G9 1366 aa36.27■■■■□ 3.4
C2orf88-204ENST00000409870 DDX17Q92841 729 aaKnown RBP36.27■■■■□ 3.4
C2orf88-204ENST00000409870 LRRC59Q96AG4 307 aaKnown RBP36.25■■■■□ 3.39
C2orf88-204ENST00000409870 WASLO00401 505 aaPredicted RBP36.25■■■■□ 3.39
C2orf88-204ENST00000409870 TULP4Q9NRJ4 1543 aa36.24■■■■□ 3.39
C2orf88-204ENST00000409870 USP32Q8NFA0 1604 aa36.24■■■■□ 3.39
C2orf88-204ENST00000409870 PNPLA6Q8IY17 1366 aa36.23■■■■□ 3.39
C2orf88-204ENST00000409870 ANKARQ7Z5J8 1434 aa36.23■■■■□ 3.39
C2orf88-204ENST00000409870 ORAI2Q96SN7 254 aa36.21■■■■□ 3.39
C2orf88-204ENST00000409870 RGPD8O14715 1765 aaPredicted RBP36.2■■■■□ 3.39
C2orf88-204ENST00000409870 NUTM2BA6NNL0 878 aaPredicted RBP36.19■■■■□ 3.38
C2orf88-204ENST00000409870 NUTM2EB1AL46 878 aaPredicted RBP36.19■■■■□ 3.38
C2orf88-204ENST00000409870 NUTM2AQ8IVF1 878 aaPredicted RBP36.19■■■■□ 3.38
C2orf88-204ENST00000409870 ST20-MTHFSA0A0A6YYL1 179 aa36.18■■■■□ 3.38
C2orf88-204ENST00000409870 NUTM2FA1L443 756 aa36.18■■■■□ 3.38
C2orf88-204ENST00000409870 ATP7BP35670 1465 aa36.17■■■■□ 3.38
C2orf88-204ENST00000409870 ZNF772Q68DY9 489 aaPredicted RBP36.16■■■■□ 3.38
C2orf88-204ENST00000409870 CDK19Q9BWU1 502 aa36.16■■■■□ 3.38
C2orf88-204ENST00000409870 SOS2Q07890 1332 aaPredicted RBP36.15■■■■□ 3.38
C2orf88-204ENST00000409870 EVC2Q86UK5 1308 aa36.14■■■■□ 3.38
C2orf88-204ENST00000409870 PRR36Q9H6K5 1346 aa36.14■■■■□ 3.38
C2orf88-204ENST00000409870 ITSN1Q15811 1721 aa36.13■■■■□ 3.38
C2orf88-204ENST00000409870 KIF1AQ12756 1690 aa36.13■■■■□ 3.37
C2orf88-204ENST00000409870 TESK2Q96S53 571 aa36.13■■■■□ 3.37
C2orf88-204ENST00000409870 TOPAZ1Q8N9V7 1692 aa36.12■■■■□ 3.37
C2orf88-204ENST00000409870 ESCO1Q5FWF5 840 aa36.1■■■■□ 3.37
C2orf88-204ENST00000409870 COL22A1Q8NFW1 1626 aaPredicted RBP36.09■■■■□ 3.37
C2orf88-204ENST00000409870 EIF4G2P78344 907 aaKnown RBP eCLIP36.08■■■■□ 3.37
C2orf88-204ENST00000409870 SRPK2P78362 688 aaKnown RBP36.08■■■■□ 3.37
C2orf88-204ENST00000409870 PXDNQ92626 1479 aa36.07■■■■□ 3.37
C2orf88-204ENST00000409870 NPHP3Q7Z494 1330 aa36.07■■■■□ 3.36
C2orf88-204ENST00000409870 NUDT16Q96DE0 195 aaKnown RBP36.06■■■■□ 3.36
C2orf88-204ENST00000409870 CABP2Q9NPB3 220 aa36.05■■■■□ 3.36
C2orf88-204ENST00000409870 AFF2P51816 1311 aa36.05■■■■□ 3.36
C2orf88-204ENST00000409870 SLC24A1O60721 1099 aa36.04■■■■□ 3.36
C2orf88-204ENST00000409870 HSPA5P11021 654 aaKnown RBP36.02■■■■□ 3.36
C2orf88-204ENST00000409870 PHF8Q9UPP1 1060 aa36.02■■■■□ 3.36
C2orf88-204ENST00000409870 C8orf37Q96NL8 207 aa36■■■■□ 3.35
C2orf88-204ENST00000409870 CCDC61Q9Y6R9 512 aa36■■■■□ 3.35
C2orf88-204ENST00000409870 ZEB1P37275 1124 aaPredicted RBP35.99■■■■□ 3.35
C2orf88-204ENST00000409870 ATAD2Q6PL18 1390 aa35.97■■■■□ 3.35
C2orf88-204ENST00000409870 PPIP5K1Q6PFW1 1433 aa35.96■■■■□ 3.35
C2orf88-204ENST00000409870 FOXO3O43524 673 aa35.96■■■■□ 3.35
C2orf88-204ENST00000409870 TMF1P82094 1093 aa35.96■■■■□ 3.35
C2orf88-204ENST00000409870 ADAMTS2O95450 1211 aa35.94■■■■□ 3.34
C2orf88-204ENST00000409870 PMFBP1Q8TBY8 1022 aa35.94■■■■□ 3.34
C2orf88-204ENST00000409870 PUS7Q96PZ0 661 aaKnown RBP35.94■■■■□ 3.34
C2orf88-204ENST00000409870 CDK12Q9NYV4 1490 aaPredicted RBP35.94■■■■□ 3.34
C2orf88-204ENST00000409870 RXRBP28702 533 aa35.92■■■■□ 3.34
C2orf88-204ENST00000409870 XPCQ01831 940 aaPredicted RBP35.92■■■■□ 3.34
C2orf88-204ENST00000409870 MARF1Q9Y4F3 1742 aaKnown RBP35.92■■■■□ 3.34
C2orf88-204ENST00000409870 PLEKHG3A1L390 1219 aa35.91■■■■□ 3.34
C2orf88-204ENST00000409870 POLR3AO14802 1390 aaPredicted RBP35.89■■■■□ 3.34
C2orf88-204ENST00000409870 NGLY1Q96IV0 654 aa35.87■■■■□ 3.33
C2orf88-204ENST00000409870 NGDNQ8NEJ9 315 aaKnown RBP35.85■■■■□ 3.33
C2orf88-204ENST00000409870 CABP1Q9NZU7 370 aa35.85■■■■□ 3.33
C2orf88-204ENST00000409870 CDCA8Q53HL2 280 aa35.84■■■■□ 3.33
C2orf88-204ENST00000409870 ACEP12821 1306 aa35.84■■■■□ 3.33
C2orf88-204ENST00000409870 TRPM3Q9HCF6 1732 aaPredicted RBP35.84■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms