RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 SDF4Q9BRK5 362 aa15.6■□□□□ 0.09
RNF43-201ENST00000407977 LTV1Q96GA3 475 aaPredicted RBP15.6■□□□□ 0.09
RNF43-201ENST00000407977 BACH2Q9BYV9 841 aa15.6■□□□□ 0.09
RNF43-201ENST00000407977 CCDC191Q8NCU4 936 aa15.6■□□□□ 0.09
RNF43-201ENST00000407977 FKBP5Q13451 457 aaPredicted RBP15.6■□□□□ 0.09
RNF43-201ENST00000407977 PRM3Q9NNZ6 103 aa15.6■□□□□ 0.09
RNF43-201ENST00000407977 PATL2C9JE40 543 aaKnown RBP15.59■□□□□ 0.09
RNF43-201ENST00000407977 GTF2E1P29083 439 aaPredicted RBP15.59■□□□□ 0.09
RNF43-201ENST00000407977 RNF214Q8ND24 703 aa15.59■□□□□ 0.09
RNF43-201ENST00000407977 H0YHG0 523 aa15.59■□□□□ 0.09
RNF43-201ENST00000407977 G3V3G9 751 aa15.59■□□□□ 0.09
RNF43-201ENST00000407977 DCAF8Q5TAQ9 597 aa15.59■□□□□ 0.09
RNF43-201ENST00000407977 CIZ1Q9ULV3 898 aaPredicted RBP15.59■□□□□ 0.09
RNF43-201ENST00000407977 ERICH2A1L162 156 aa15.58■□□□□ 0.09
RNF43-201ENST00000407977 PANK1Q8TE04 598 aa15.58■□□□□ 0.09
RNF43-201ENST00000407977 MYOM3Q5VTT5 1437 aa15.58■□□□□ 0.09
RNF43-201ENST00000407977 RDXP35241 583 aaKnown RBP15.58■□□□□ 0.08
RNF43-201ENST00000407977 GCC1Q96CN9 775 aa15.58■□□□□ 0.08
RNF43-201ENST00000407977 LEKR1Q6ZMV7 388 aa15.58■□□□□ 0.08
RNF43-201ENST00000407977 MYO6Q9UM54 1294 aa15.57■□□□□ 0.08
RNF43-201ENST00000407977 KINO60870 393 aaKnown RBP15.57■□□□□ 0.08
RNF43-201ENST00000407977 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.56■□□□□ 0.08
RNF43-201ENST00000407977 NOL10Q9BSC4 688 aaKnown RBP15.56■□□□□ 0.08
RNF43-201ENST00000407977 NFXL1Q6ZNB6 911 aa15.56■□□□□ 0.08
RNF43-201ENST00000407977 RALYLQ86SE5 291 aaKnown RBP15.56■□□□□ 0.08
RNF43-201ENST00000407977 CNTROBQ8N137 903 aa15.56■□□□□ 0.08
RNF43-201ENST00000407977 GRPEL1Q9HAV7 217 aa15.56■□□□□ 0.08
RNF43-201ENST00000407977 APPP05067 770 aa15.56■□□□□ 0.08
RNF43-201ENST00000407977 WWC1Q8IX03 1113 aa15.56■□□□□ 0.08
RNF43-201ENST00000407977 TTC5Q8N0Z6 440 aa15.56■□□□□ 0.08
RNF43-201ENST00000407977 PRPF40AO75400 957 aaKnown RBP15.55■□□□□ 0.08
RNF43-201ENST00000407977 HIP1O00291 1037 aa15.55■□□□□ 0.08
RNF43-201ENST00000407977 GNAI3P08754 354 aa15.55■□□□□ 0.08
RNF43-201ENST00000407977 SMARCE1Q969G3 411 aa15.55■□□□□ 0.08
RNF43-201ENST00000407977 PIP4K2AP48426 406 aaPredicted RBP15.54■□□□□ 0.08
RNF43-201ENST00000407977 IL27Q8NEV9 243 aa15.54■□□□□ 0.08
RNF43-201ENST00000407977 XBP1P17861 261 aa15.54■□□□□ 0.08
RNF43-201ENST00000407977 NAP1L1P55209 391 aaKnown RBP15.54■□□□□ 0.08
RNF43-201ENST00000407977 PDZRN3Q9UPQ7 1066 aa15.54■□□□□ 0.08
RNF43-201ENST00000407977 EIF2S2P20042 333 aaKnown RBP15.54■□□□□ 0.08
RNF43-201ENST00000407977 CCDC192P0DO97 292 aa15.54■□□□□ 0.08
RNF43-201ENST00000407977 BRMS1Q9HCU9 246 aa15.54■□□□□ 0.08
RNF43-201ENST00000407977 CCDC9Q9Y3X0 531 aaKnown RBP15.54■□□□□ 0.08
RNF43-201ENST00000407977 CT47B1P0C2W7 299 aaPredicted RBP15.53■□□□□ 0.08
RNF43-201ENST00000407977 NEK4P51957 841 aa15.53■□□□□ 0.08
RNF43-201ENST00000407977 FILIP1LQ4L180 1135 aa15.53■□□□□ 0.08
RNF43-201ENST00000407977 CAGE1Q8TC20 777 aa15.53■□□□□ 0.08
RNF43-201ENST00000407977 CUX1P39880 1505 aa15.53■□□□□ 0.08
RNF43-201ENST00000407977 FGD6Q6ZV73 1430 aa15.53■□□□□ 0.08
RNF43-201ENST00000407977 ESPNB1AK53 854 aa15.53■□□□□ 0.08
RNF43-201ENST00000407977 TAF3Q5VWG9 929 aa15.53■□□□□ 0.08
RNF43-201ENST00000407977 NUTM2DQ5VT03 806 aaPredicted RBP15.53■□□□□ 0.08
RNF43-201ENST00000407977 PDILTQ8N807 584 aa15.53■□□□□ 0.08
RNF43-201ENST00000407977 CCDC112Q8NEF3 446 aa15.53■□□□□ 0.08
RNF43-201ENST00000407977 ZNF396Q96N95 335 aaPredicted RBP15.52■□□□□ 0.08
RNF43-201ENST00000407977 PDIA4P13667 645 aaKnown RBP15.52■□□□□ 0.08
RNF43-201ENST00000407977 PDCL2Q8N4E4 241 aa15.52■□□□□ 0.08
RNF43-201ENST00000407977 ADAMTS8Q9UP79 889 aa15.52■□□□□ 0.08
RNF43-201ENST00000407977 UBTFL1P0CB47 393 aaPredicted RBP15.52■□□□□ 0.07
RNF43-201ENST00000407977 AEBP1Q8IUX7 1158 aa15.52■□□□□ 0.07
RNF43-201ENST00000407977 WDR33Q9C0J8 1336 aaKnown RBP15.51■□□□□ 0.07
RNF43-201ENST00000407977 TSPYL4Q9UJ04 414 aa15.51■□□□□ 0.07
RNF43-201ENST00000407977 ANO8Q9HCE9 1232 aaPredicted RBP15.51■□□□□ 0.07
RNF43-201ENST00000407977 SMG6Q86US8 1419 aaKnown RBP15.51■□□□□ 0.07
RNF43-201ENST00000407977 OFD1O75665 1012 aa15.51■□□□□ 0.07
RNF43-201ENST00000407977 DHX16O60231 1041 aaKnown RBP15.51■□□□□ 0.07
RNF43-201ENST00000407977 CLASRPQ8N2M8 674 aaKnown RBP15.51■□□□□ 0.07
RNF43-201ENST00000407977 K7ELQ4 463 aaPredicted RBP15.5■□□□□ 0.07
RNF43-201ENST00000407977 CADPSQ9ULU8 1353 aa15.5■□□□□ 0.07
RNF43-201ENST00000407977 SMC2O95347 1197 aa15.5■□□□□ 0.07
RNF43-201ENST00000407977 FBXW7Q969H0 707 aa15.5■□□□□ 0.07
RNF43-201ENST00000407977 TCEAL9Q9UHQ7 104 aa15.5■□□□□ 0.07
RNF43-201ENST00000407977 SCAPERQ9BY12 1400 aa15.49■□□□□ 0.07
RNF43-201ENST00000407977 ERLIN1O75477 346 aa15.49■□□□□ 0.07
RNF43-201ENST00000407977 MCM4P33991 863 aa15.49■□□□□ 0.07
RNF43-201ENST00000407977 JMYQ8N9B5 988 aa15.49■□□□□ 0.07
RNF43-201ENST00000407977 JPH4Q96JJ6 628 aa15.49■□□□□ 0.07
RNF43-201ENST00000407977 MINK1Q8N4C8 1332 aaPredicted RBP15.49■□□□□ 0.07
RNF43-201ENST00000407977 EIF3JO75822 258 aaKnown RBP15.49■□□□□ 0.07
RNF43-201ENST00000407977 RBM10P98175 930 aaKnown RBP15.48■□□□□ 0.07
RNF43-201ENST00000407977 USP8P40818 1118 aa15.48■□□□□ 0.07
RNF43-201ENST00000407977 ANKRD1Q15327 319 aa15.48■□□□□ 0.07
RNF43-201ENST00000407977 TCP11L2Q8N4U5 519 aa15.48■□□□□ 0.07
RNF43-201ENST00000407977 UQCRHLA0A096LP55 91 aa15.47■□□□□ 0.07
RNF43-201ENST00000407977 UQCRHP07919 91 aa15.47■□□□□ 0.07
RNF43-201ENST00000407977 CT47A1Q5JQC4 288 aaPredicted RBP15.47■□□□□ 0.07
RNF43-201ENST00000407977 ZSCAN30Q86W11 494 aa15.47■□□□□ 0.07
RNF43-201ENST00000407977 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.47■□□□□ 0.07
RNF43-201ENST00000407977 TSPYL1Q9H0U9 437 aa15.46■□□□□ 0.07
RNF43-201ENST00000407977 WIZO95785 1651 aa15.46■□□□□ 0.07
RNF43-201ENST00000407977 ERC1Q8IUD2 1116 aa15.46■□□□□ 0.07
RNF43-201ENST00000407977 TXLNBQ8N3L3 684 aa15.46■□□□□ 0.07
RNF43-201ENST00000407977 CDCA7LQ96GN5 454 aa15.46■□□□□ 0.07
RNF43-201ENST00000407977 FIBPO43427 364 aa15.46■□□□□ 0.06
RNF43-201ENST00000407977 DACH1Q9UI36 760 aa15.46■□□□□ 0.06
RNF43-201ENST00000407977 SART3Q15020 963 aaKnown RBP15.45■□□□□ 0.06
RNF43-201ENST00000407977 AXDND1Q5T1B0 1012 aaPredicted RBP15.45■□□□□ 0.06
RNF43-201ENST00000407977 FSD1Q9BTV5 496 aa15.45■□□□□ 0.06
RNF43-201ENST00000407977 EPS15P42566 896 aa15.45■□□□□ 0.06
RNF43-201ENST00000407977 KRT85P78386 507 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms