RNA–Protein interactions for RNA: ENST00000406524.6

CCDC178-205, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC178, Length 3,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-205ENST00000406524 CD44P16070 742 aaKnown RBP4.78□□□□□ -1.64
CCDC178-205ENST00000406524 ERCC3P19447 782 aa4.78□□□□□ -1.64
CCDC178-205ENST00000406524 NBPF10Q6P3W6 841 aaKnown RBP4.78□□□□□ -1.64
CCDC178-205ENST00000406524 MRRFQ96E11 262 aaKnown RBP4.78□□□□□ -1.64
CCDC178-205ENST00000406524 BDNFP23560 247 aa4.77□□□□□ -1.65
CCDC178-205ENST00000406524 TERF1P54274 439 aa4.77□□□□□ -1.65
CCDC178-205ENST00000406524 NEXNQ0ZGT2 675 aa4.77□□□□□ -1.65
CCDC178-205ENST00000406524 WDR78Q5VTH9 848 aa4.77□□□□□ -1.65
CCDC178-205ENST00000406524 C11orf96Q7Z7L8 435 aa4.77□□□□□ -1.65
CCDC178-205ENST00000406524 ANKRD23Q86SG2 305 aa4.77□□□□□ -1.65
CCDC178-205ENST00000406524 ACRBPQ8NEB7 543 aa4.77□□□□□ -1.65
CCDC178-205ENST00000406524 PDCL3Q9H2J4 239 aa4.77□□□□□ -1.65
CCDC178-205ENST00000406524 ARHGEF10LQ9HCE6 1279 aa4.77□□□□□ -1.65
CCDC178-205ENST00000406524 CCDC189A1A4V9 331 aa4.76□□□□□ -1.65
CCDC178-205ENST00000406524 SKAP1Q86WV1 359 aa4.76□□□□□ -1.65
CCDC178-205ENST00000406524 NRBP1Q9UHY1 535 aa4.76□□□□□ -1.65
CCDC178-205ENST00000406524 ATF5Q9Y2D1 282 aaPredicted RBP4.76□□□□□ -1.65
CCDC178-205ENST00000406524 ARIH1Q9Y4X5 557 aaPredicted RBP4.76□□□□□ -1.65
CCDC178-205ENST00000406524 APLP1P51693 650 aa4.76□□□□□ -1.65
CCDC178-205ENST00000406524 PUS10Q3MIT2 529 aaKnown RBP4.76□□□□□ -1.65
CCDC178-205ENST00000406524 POM121Q96HA1 1249 aa4.76□□□□□ -1.65
CCDC178-205ENST00000406524 DRC1Q96MC2 740 aa4.76□□□□□ -1.65
CCDC178-205ENST00000406524 KDM4CQ9H3R0 1056 aa4.76□□□□□ -1.65
CCDC178-205ENST00000406524 CCT2P78371 535 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 SATB1Q01826 763 aa4.75□□□□□ -1.65
CCDC178-205ENST00000406524 MLECQ14165 292 aa4.75□□□□□ -1.65
CCDC178-205ENST00000406524 NKX1-1Q15270 411 aaPredicted RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 ZRSR2Q15696 482 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 LRRC27Q9C0I9 530 aa4.75□□□□□ -1.65
CCDC178-205ENST00000406524 KLF15Q9UIH9 416 aa4.75□□□□□ -1.65
CCDC178-205ENST00000406524 ISY1Q9ULR0 285 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 G3BP2Q9UN86 482 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 MPHOSPH10O00566 681 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 U2SURPO15042 1029 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 GYS2P54840 703 aa4.75□□□□□ -1.65
CCDC178-205ENST00000406524 TTC30AQ86WT1 665 aa4.75□□□□□ -1.65
CCDC178-205ENST00000406524 HELBQ8NG08 1087 aaPredicted RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 TPX2Q9ULW0 747 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 DIS3Q9Y2L1 958 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 PES1O00541 588 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 NAP1L1P55209 391 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 TAF3Q5VWG9 929 aa4.75□□□□□ -1.65
CCDC178-205ENST00000406524 PABPN1Q86U42 306 aaKnown RBP eCLIP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 SMAP1Q8IYB5 467 aaPredicted RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 MICALL1Q8N3F8 863 aa4.75□□□□□ -1.65
CCDC178-205ENST00000406524 GEMIN8Q9NWZ8 242 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 MKRN1Q9UHC7 482 aaKnown RBP4.75□□□□□ -1.65
CCDC178-205ENST00000406524 CCDC194A0A1B0GVG4 234 aa4.74□□□□□ -1.65
CCDC178-205ENST00000406524 NAT2P11245 290 aa4.74□□□□□ -1.65
CCDC178-205ENST00000406524 NAT1P18440 290 aa4.74□□□□□ -1.65
CCDC178-205ENST00000406524 SKIV2LQ15477 1246 aaKnown RBP4.74□□□□□ -1.65
CCDC178-205ENST00000406524 MAF1Q9H063 256 aa4.74□□□□□ -1.65
CCDC178-205ENST00000406524 NUB1Q9Y5A7 615 aa4.74□□□□□ -1.65
CCDC178-205ENST00000406524 U2AF1L5P0DN76 240 aaPredicted RBP4.74□□□□□ -1.65
CCDC178-205ENST00000406524 TNNT2P45379 298 aaPredicted RBP4.74□□□□□ -1.65
CCDC178-205ENST00000406524 U2AF1Q01081 240 aaKnown RBP eCLIP4.74□□□□□ -1.65
CCDC178-205ENST00000406524 SF3A1Q15459 793 aaKnown RBP4.74□□□□□ -1.65
CCDC178-205ENST00000406524 RBM46Q8TBY0 533 aaKnown RBP4.74□□□□□ -1.65
CCDC178-205ENST00000406524 GNL3LQ9NVN8 582 aaKnown RBP4.74□□□□□ -1.65
CCDC178-205ENST00000406524 SBNO2Q9Y2G9 1366 aa4.74□□□□□ -1.65
CCDC178-205ENST00000406524 RPAINQ86UA6 219 aa4.73□□□□□ -1.65
CCDC178-205ENST00000406524 HSCBQ8IWL3 235 aa4.73□□□□□ -1.65
CCDC178-205ENST00000406524 MAP3K20Q9NYL2 800 aaKnown RBP4.73□□□□□ -1.65
CCDC178-205ENST00000406524 WWC3Q9ULE0 1092 aa4.73□□□□□ -1.65
CCDC178-205ENST00000406524 PDZRN3Q9UPQ7 1066 aa4.73□□□□□ -1.65
CCDC178-205ENST00000406524 IVNS1ABPQ9Y6Y0 642 aa4.73□□□□□ -1.65
CCDC178-205ENST00000406524 IGHDP01880 384 aa4.73□□□□□ -1.65
CCDC178-205ENST00000406524 CALRP27797 417 aaKnown RBP4.73□□□□□ -1.65
CCDC178-205ENST00000406524 MYCBPQ99417 103 aaPredicted RBP4.73□□□□□ -1.65
CCDC178-205ENST00000406524 UBA5Q9GZZ9 404 aa4.73□□□□□ -1.65
CCDC178-205ENST00000406524 RAI14Q9P0K7 980 aa4.73□□□□□ -1.65
CCDC178-205ENST00000406524 AMOTL2Q9Y2J4 779 aa4.73□□□□□ -1.65
CCDC178-205ENST00000406524 RGS20O76081 388 aa4.72□□□□□ -1.65
CCDC178-205ENST00000406524 DUSP27Q5VZP5 1158 aa4.72□□□□□ -1.65
CCDC178-205ENST00000406524 SREK1Q8WXA9 508 aaKnown RBP4.72□□□□□ -1.65
CCDC178-205ENST00000406524 MAGEC2Q9UBF1 373 aaPredicted RBP4.72□□□□□ -1.65
CCDC178-205ENST00000406524 FAN1Q9Y2M0 1017 aa4.72□□□□□ -1.65
CCDC178-205ENST00000406524 WASHC2CQ9Y4E1 1318 aa4.72□□□□□ -1.65
CCDC178-205ENST00000406524 SMAPO00193 183 aa4.72□□□□□ -1.65
CCDC178-205ENST00000406524 ZKSCAN8Q15776 578 aaPredicted RBP4.72□□□□□ -1.65
CCDC178-205ENST00000406524 SMC5Q8IY18 1101 aa4.72□□□□□ -1.65
CCDC178-205ENST00000406524 NEUROD6Q96NK8 337 aa4.72□□□□□ -1.65
CCDC178-205ENST00000406524 FBXO9Q9UK97 447 aaPredicted RBP4.72□□□□□ -1.65
CCDC178-205ENST00000406524 NOP58Q9Y2X3 529 aaKnown RBP4.72□□□□□ -1.65
CCDC178-205ENST00000406524 EVA1CP58658 441 aa4.72□□□□□ -1.65
CCDC178-205ENST00000406524 CT47A1Q5JQC4 288 aaPredicted RBP4.72□□□□□ -1.65
CCDC178-205ENST00000406524 C1QTNF12Q5T7M4 302 aa4.72□□□□□ -1.65
CCDC178-205ENST00000406524 C1orf131Q8NDD1 294 aaKnown RBP4.72□□□□□ -1.65
CCDC178-205ENST00000406524 POTEB2H3BUK9 544 aa4.71□□□□□ -1.66
CCDC178-205ENST00000406524 ONECUT3O60422 494 aaPredicted RBP4.71□□□□□ -1.66
CCDC178-205ENST00000406524 MCCD1P59942 119 aaPredicted RBP4.71□□□□□ -1.66
CCDC178-205ENST00000406524 SETDB1Q15047 1291 aa4.71□□□□□ -1.66
CCDC178-205ENST00000406524 E2F5Q15329 346 aa4.71□□□□□ -1.66
CCDC178-205ENST00000406524 DPH6Q7L8W6 267 aa4.71□□□□□ -1.66
CCDC178-205ENST00000406524 CHPF2Q9P2E5 772 aa4.71□□□□□ -1.66
CCDC178-205ENST00000406524 PRR12Q9ULL5 1215 aa4.71□□□□□ -1.66
CCDC178-205ENST00000406524 DYTNA2CJ06 578 aa4.71□□□□□ -1.66
CCDC178-205ENST00000406524 EXOC5O00471 708 aa4.71□□□□□ -1.66
CCDC178-205ENST00000406524 SEMA3EO15041 775 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms