RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 RIMBP3BA6NNM3 1639 aa12.34□□□□□ -0.43
CBX1-203ENST00000402583 RIMBP3Q9UFD9 1639 aa12.34□□□□□ -0.43
CBX1-203ENST00000402583 FAM69CQ0P6D2 419 aa12.34□□□□□ -0.43
CBX1-203ENST00000402583 RCAN3Q9UKA8 241 aa12.34□□□□□ -0.43
CBX1-203ENST00000402583 SSUH2Q9Y2M2 353 aa12.34□□□□□ -0.43
CBX1-203ENST00000402583 YEATS2Q9ULM3 1422 aa12.34□□□□□ -0.43
CBX1-203ENST00000402583 REREQ9P2R6 1566 aa12.34□□□□□ -0.43
CBX1-203ENST00000402583 NEXMIFQ5QGS0 1516 aa12.33□□□□□ -0.44
CBX1-203ENST00000402583 DIP2BQ9P265 1576 aa12.33□□□□□ -0.44
CBX1-203ENST00000402583 RRP1P56182 461 aaKnown RBP12.32□□□□□ -0.44
CBX1-203ENST00000402583 NGEFQ8N5V2 710 aa12.32□□□□□ -0.44
CBX1-203ENST00000402583 CCDC136Q96JN2 1154 aa12.32□□□□□ -0.44
CBX1-203ENST00000402583 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
CBX1-203ENST00000402583 EVC2Q86UK5 1308 aa12.32□□□□□ -0.44
CBX1-203ENST00000402583 AGLP35573 1532 aa12.32□□□□□ -0.44
CBX1-203ENST00000402583 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
CBX1-203ENST00000402583 FBXO3Q9UK99 471 aa12.31□□□□□ -0.44
CBX1-203ENST00000402583 ADAMTS8Q9UP79 889 aa12.31□□□□□ -0.44
CBX1-203ENST00000402583 RBM19Q9Y4C8 960 aaKnown RBP12.31□□□□□ -0.44
CBX1-203ENST00000402583 QRICH2Q9H0J4 1663 aa12.3□□□□□ -0.44
CBX1-203ENST00000402583 IDI1Q13907 227 aa12.3□□□□□ -0.44
CBX1-203ENST00000402583 SIGLEC1Q9BZZ2 1709 aa12.3□□□□□ -0.44
CBX1-203ENST00000402583 SALL2Q9Y467 1007 aaPredicted RBP12.29□□□□□ -0.44
CBX1-203ENST00000402583 NINLQ9Y2I6 1382 aa12.29□□□□□ -0.44
CBX1-203ENST00000402583 PREX1Q8TCU6 1659 aa12.28□□□□□ -0.44
CBX1-203ENST00000402583 NSD2O96028 1365 aa12.28□□□□□ -0.44
CBX1-203ENST00000402583 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.45
CBX1-203ENST00000402583 TMEM132EQ6IEE7 984 aa12.27□□□□□ -0.45
CBX1-203ENST00000402583 MORC1Q86VD1 984 aa12.27□□□□□ -0.45
CBX1-203ENST00000402583 CARD14Q9BXL6 1004 aa12.27□□□□□ -0.45
CBX1-203ENST00000402583 POLR3AO14802 1390 aaPredicted RBP12.27□□□□□ -0.45
CBX1-203ENST00000402583 NSD3Q9BZ95 1437 aa12.27□□□□□ -0.45
CBX1-203ENST00000402583 USP32Q8NFA0 1604 aa12.26□□□□□ -0.45
CBX1-203ENST00000402583 CGNL1Q0VF96 1302 aa12.26□□□□□ -0.45
CBX1-203ENST00000402583 TMEM131LA2VDJ0 1609 aa12.26□□□□□ -0.45
CBX1-203ENST00000402583 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
CBX1-203ENST00000402583 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
CBX1-203ENST00000402583 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
CBX1-203ENST00000402583 ANKRD36BQ8N2N9 1353 aa12.24□□□□□ -0.45
CBX1-203ENST00000402583 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.24□□□□□ -0.45
CBX1-203ENST00000402583 CDCA7LQ96GN5 454 aa12.24□□□□□ -0.45
CBX1-203ENST00000402583 CFAP53Q96M91 514 aa12.24□□□□□ -0.45
CBX1-203ENST00000402583 ARHGEF28Q8N1W1 1705 aaKnown RBP12.23□□□□□ -0.45
CBX1-203ENST00000402583 FANCIQ9NVI1 1328 aa12.23□□□□□ -0.45
CBX1-203ENST00000402583 ATAD2Q6PL18 1390 aa12.22□□□□□ -0.45
CBX1-203ENST00000402583 ZNF521Q96K83 1311 aa12.22□□□□□ -0.45
CBX1-203ENST00000402583 SLC12A5Q9H2X9 1139 aa12.22□□□□□ -0.45
CBX1-203ENST00000402583 TULP4Q9NRJ4 1543 aa12.21□□□□□ -0.45
CBX1-203ENST00000402583 NUTM2DQ5VT03 806 aaPredicted RBP12.21□□□□□ -0.45
CBX1-203ENST00000402583 ESF1Q9H501 851 aaKnown RBP12.21□□□□□ -0.45
CBX1-203ENST00000402583 YTHDC2Q9H6S0 1430 aaKnown RBP12.2□□□□□ -0.46
CBX1-203ENST00000402583 PLEKHH1Q9ULM0 1364 aa12.2□□□□□ -0.46
CBX1-203ENST00000402583 POGKQ9P215 609 aa12.2□□□□□ -0.46
CBX1-203ENST00000402583 SPATA31D1Q6ZQQ2 1576 aa12.2□□□□□ -0.46
CBX1-203ENST00000402583 ARHGEF40Q8TER5 1519 aa12.2□□□□□ -0.46
CBX1-203ENST00000402583 E9PSI1 815 aa12.19□□□□□ -0.46
CBX1-203ENST00000402583 SRPK2P78362 688 aaKnown RBP12.19□□□□□ -0.46
CBX1-203ENST00000402583 SLFN5Q08AF3 891 aa12.19□□□□□ -0.46
CBX1-203ENST00000402583 DUSP27Q5VZP5 1158 aa12.19□□□□□ -0.46
CBX1-203ENST00000402583 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.19□□□□□ -0.46
CBX1-203ENST00000402583 EXOC6Q8TAG9 804 aa12.19□□□□□ -0.46
CBX1-203ENST00000402583 TERF2IPQ9NYB0 399 aa12.19□□□□□ -0.46
CBX1-203ENST00000402583 CFAP65Q6ZU64 1925 aaKnown RBP12.19□□□□□ -0.46
CBX1-203ENST00000402583 HDGFP51858 240 aaKnown RBP12.18□□□□□ -0.46
CBX1-203ENST00000402583 FBXO31Q5XUX0 539 aaPredicted RBP12.18□□□□□ -0.46
CBX1-203ENST00000402583 CCDC146Q8IYE0 955 aa12.18□□□□□ -0.46
CBX1-203ENST00000402583 STK26Q9P289 416 aa12.18□□□□□ -0.46
CBX1-203ENST00000402583 PTPRMP28827 1452 aa12.18□□□□□ -0.46
CBX1-203ENST00000402583 DLC1Q96QB1 1528 aa12.17□□□□□ -0.46
CBX1-203ENST00000402583 CLTCQ00610 1675 aaKnown RBP12.17□□□□□ -0.46
CBX1-203ENST00000402583 APAF1O14727 1248 aa12.17□□□□□ -0.46
CBX1-203ENST00000402583 TRMT2AQ8IZ69 625 aaKnown RBP12.17□□□□□ -0.46
CBX1-203ENST00000402583 RUNDC1Q96C34 613 aa12.17□□□□□ -0.46
CBX1-203ENST00000402583 ALKQ9UM73 1620 aa12.17□□□□□ -0.46
CBX1-203ENST00000402583 A2ML1A8K2U0 1454 aa12.16□□□□□ -0.46
CBX1-203ENST00000402583 NKTRP30414 1462 aaKnown RBP12.16□□□□□ -0.46
CBX1-203ENST00000402583 HDGFL2Q7Z4V5 671 aaPredicted RBP12.16□□□□□ -0.46
CBX1-203ENST00000402583 PRAM1Q96QH2 718 aa12.16□□□□□ -0.46
CBX1-203ENST00000402583 CABP2Q9NPB3 220 aa12.16□□□□□ -0.46
CBX1-203ENST00000402583 RIMS2Q9UQ26 1411 aa12.16□□□□□ -0.46
CBX1-203ENST00000402583 TSPOAP1O95153 1857 aa12.16□□□□□ -0.46
CBX1-203ENST00000402583 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
CBX1-203ENST00000402583 MED14O60244 1454 aa12.15□□□□□ -0.46
CBX1-203ENST00000402583 TCERG1O14776 1098 aaKnown RBP12.15□□□□□ -0.46
CBX1-203ENST00000402583 SAFB2Q14151 953 aaKnown RBP eCLIP12.14□□□□□ -0.47
CBX1-203ENST00000402583 MINK1Q8N4C8 1332 aaPredicted RBP12.13□□□□□ -0.47
CBX1-203ENST00000402583 TNNT2P45379 298 aaPredicted RBP12.13□□□□□ -0.47
CBX1-203ENST00000402583 MTHFSP49914 203 aa12.13□□□□□ -0.47
CBX1-203ENST00000402583 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
CBX1-203ENST00000402583 CRBNQ96SW2 442 aa12.13□□□□□ -0.47
CBX1-203ENST00000402583 ANP32EQ9BTT0 268 aa12.13□□□□□ -0.47
CBX1-203ENST00000402583 A0A1W2PP64 1363 aa12.13□□□□□ -0.47
CBX1-203ENST00000402583 MYO5BQ9ULV0 1848 aa12.12□□□□□ -0.47
CBX1-203ENST00000402583 MS4A1P11836 297 aa12.12□□□□□ -0.47
CBX1-203ENST00000402583 MLECQ14165 292 aa12.12□□□□□ -0.47
CBX1-203ENST00000402583 CCDC27Q2M243 656 aa12.12□□□□□ -0.47
CBX1-203ENST00000402583 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
CBX1-203ENST00000402583 PNNQ9H307 717 aaKnown RBP12.12□□□□□ -0.47
CBX1-203ENST00000402583 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
CBX1-203ENST00000402583 ZMYM3Q14202 1370 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms