RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 HPS5Q9UPZ3 1129 aa4.94□□□□□ -1.62
CBX3P9-201ENST00000402326 CLK2P49760 499 aaKnown RBP4.93□□□□□ -1.62
CBX3P9-201ENST00000402326 RIC3Q7Z5B4 369 aa4.93□□□□□ -1.62
CBX3P9-201ENST00000402326 PRR14Q9BWN1 585 aa4.93□□□□□ -1.62
CBX3P9-201ENST00000402326 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
CBX3P9-201ENST00000402326 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
CBX3P9-201ENST00000402326 MOXD2PA6NHM9 499 aa4.92□□□□□ -1.62
CBX3P9-201ENST00000402326 SPTLC1O15269 473 aa4.92□□□□□ -1.62
CBX3P9-201ENST00000402326 GJA5P36382 358 aa4.92□□□□□ -1.62
CBX3P9-201ENST00000402326 ATP6V1AP38606 617 aa4.92□□□□□ -1.62
CBX3P9-201ENST00000402326 PROCA1Q8NCQ7 364 aaPredicted RBP4.92□□□□□ -1.62
CBX3P9-201ENST00000402326 HOXA2O43364 376 aa4.91□□□□□ -1.62
CBX3P9-201ENST00000402326 ACTN4O43707 911 aaKnown RBP4.91□□□□□ -1.62
CBX3P9-201ENST00000402326 NDUFV2P19404 249 aa4.91□□□□□ -1.62
CBX3P9-201ENST00000402326 FUT2Q10981 343 aa4.91□□□□□ -1.62
CBX3P9-201ENST00000402326 TUSC1Q2TAM9 212 aa4.91□□□□□ -1.62
CBX3P9-201ENST00000402326 RSBN1LQ6PCB5 846 aaPredicted RBP4.91□□□□□ -1.62
CBX3P9-201ENST00000402326 KCTD17Q8N5Z5 321 aa4.91□□□□□ -1.62
CBX3P9-201ENST00000402326 PRKD2Q9BZL6 878 aa4.91□□□□□ -1.62
CBX3P9-201ENST00000402326 LIMD1Q9UGP4 676 aa4.91□□□□□ -1.62
CBX3P9-201ENST00000402326 FDX1P10109 184 aa4.9□□□□□ -1.63
CBX3P9-201ENST00000402326 ERICH6Q7L0X2 663 aa4.9□□□□□ -1.63
CBX3P9-201ENST00000402326 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.9□□□□□ -1.63
CBX3P9-201ENST00000402326 WBP1LQ9NX94 342 aa4.9□□□□□ -1.63
CBX3P9-201ENST00000402326 APLP1P51693 650 aa4.89□□□□□ -1.63
CBX3P9-201ENST00000402326 CSPP1Q1MSJ5 1256 aa4.89□□□□□ -1.63
CBX3P9-201ENST00000402326 NYAP1Q6ZVC0 841 aa4.89□□□□□ -1.63
CBX3P9-201ENST00000402326 NUTM2BA6NNL0 878 aaPredicted RBP4.88□□□□□ -1.63
CBX3P9-201ENST00000402326 NUTM2EB1AL46 878 aaPredicted RBP4.88□□□□□ -1.63
CBX3P9-201ENST00000402326 GUCA2AQ02747 115 aa4.88□□□□□ -1.63
CBX3P9-201ENST00000402326 PUS10Q3MIT2 529 aaKnown RBP4.88□□□□□ -1.63
CBX3P9-201ENST00000402326 MORN1Q5T089 497 aa4.88□□□□□ -1.63
CBX3P9-201ENST00000402326 NUTM2DQ5VT03 806 aaPredicted RBP4.88□□□□□ -1.63
CBX3P9-201ENST00000402326 PRPF38BQ5VTL8 546 aaKnown RBP4.88□□□□□ -1.63
CBX3P9-201ENST00000402326 NUTM2AQ8IVF1 878 aaPredicted RBP4.88□□□□□ -1.63
CBX3P9-201ENST00000402326 HLA-CQ95604 372 aa4.88□□□□□ -1.63
CBX3P9-201ENST00000402326 PCDHB3Q9Y5E6 796 aa4.88□□□□□ -1.63
CBX3P9-201ENST00000402326 PCDHB15Q9Y5E8 787 aa4.88□□□□□ -1.63
CBX3P9-201ENST00000402326 LILRB3O75022 631 aa4.87□□□□□ -1.63
CBX3P9-201ENST00000402326 NFX1Q12986 1120 aaKnown RBP4.87□□□□□ -1.63
CBX3P9-201ENST00000402326 QPCTQ16769 361 aa4.87□□□□□ -1.63
CBX3P9-201ENST00000402326 PPP2R2DQ66LE6 453 aa4.87□□□□□ -1.63
CBX3P9-201ENST00000402326 ZBTB3Q9H5J0 574 aa4.87□□□□□ -1.63
CBX3P9-201ENST00000402326 PCDHGC3Q9UN70 934 aa4.87□□□□□ -1.63
CBX3P9-201ENST00000402326 V9GY48 417 aaPredicted RBP4.87□□□□□ -1.63
CBX3P9-201ENST00000402326 SPDYE5A6NIY4 337 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 C6orf229H3BNL8 230 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 SUPT5HO00267 1087 aaKnown RBP4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 NR1I2O75469 434 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 HRCP23327 699 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 RFC5P40937 340 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 KCNC4Q03721 635 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 MTMR2Q13614 643 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 Q3C1V9 767 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 TMEM259Q4ZIN3 620 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 SCUBE3Q8IX30 993 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 SLC27A5Q9Y2P5 690 aa4.86□□□□□ -1.63
CBX3P9-201ENST00000402326 FLIIQ13045 1269 aa4.85□□□□□ -1.63
CBX3P9-201ENST00000402326 RTL5Q5HYW3 569 aaPredicted RBP4.85□□□□□ -1.63
CBX3P9-201ENST00000402326 FBXO31Q5XUX0 539 aaPredicted RBP4.85□□□□□ -1.63
CBX3P9-201ENST00000402326 BLOC1S3Q6QNY0 202 aa4.85□□□□□ -1.63
CBX3P9-201ENST00000402326 CABLES1Q8TDN4 633 aa4.85□□□□□ -1.63
CBX3P9-201ENST00000402326 SALL2Q9Y467 1007 aaPredicted RBP4.85□□□□□ -1.63
CBX3P9-201ENST00000402326 FMNL1O95466 1100 aaPredicted RBP4.84□□□□□ -1.63
CBX3P9-201ENST00000402326 PKDCCQ504Y2 493 aa4.84□□□□□ -1.63
CBX3P9-201ENST00000402326 BANK1Q8NDB2 785 aa4.84□□□□□ -1.63
CBX3P9-201ENST00000402326 SYMPKQ92797 1274 aaKnown RBP4.84□□□□□ -1.63
CBX3P9-201ENST00000402326 COPS2P61201 443 aa4.83□□□□□ -1.64
CBX3P9-201ENST00000402326 MYT1Q01538 1121 aa4.83□□□□□ -1.64
CBX3P9-201ENST00000402326 BRICD5Q6PL45 260 aa4.83□□□□□ -1.64
CBX3P9-201ENST00000402326 RETREG3Q86VR2 466 aa4.83□□□□□ -1.64
CBX3P9-201ENST00000402326 AP1G2O75843 785 aa4.82□□□□□ -1.64
CBX3P9-201ENST00000402326 RNF19BQ6ZMZ0 732 aa4.82□□□□□ -1.64
CBX3P9-201ENST00000402326 HELBQ8NG08 1087 aaPredicted RBP4.82□□□□□ -1.64
CBX3P9-201ENST00000402326 PRR7Q8TB68 274 aa4.82□□□□□ -1.64
CBX3P9-201ENST00000402326 TSC1Q92574 1164 aa4.82□□□□□ -1.64
CBX3P9-201ENST00000402326 THAP11Q96EK4 314 aa4.82□□□□□ -1.64
CBX3P9-201ENST00000402326 MTRQ99707 1265 aa4.82□□□□□ -1.64
CBX3P9-201ENST00000402326 USB1Q9BQ65 265 aaKnown RBP4.82□□□□□ -1.64
CBX3P9-201ENST00000402326 IL21Q9HBE4 155 aa4.82□□□□□ -1.64
CBX3P9-201ENST00000402326 CFAP99D6REC4 459 aa4.81□□□□□ -1.64
CBX3P9-201ENST00000402326 ZPR1O75312 459 aa4.81□□□□□ -1.64
CBX3P9-201ENST00000402326 TJAP1Q5JTD0 557 aa4.81□□□□□ -1.64
CBX3P9-201ENST00000402326 SPSB2Q99619 263 aa4.81□□□□□ -1.64
CBX3P9-201ENST00000402326 KRTAP17-1Q9BYP8 105 aa4.81□□□□□ -1.64
CBX3P9-201ENST00000402326 CTDSPL2Q05D32 466 aa4.8□□□□□ -1.64
CBX3P9-201ENST00000402326 MCM6Q14566 821 aa4.8□□□□□ -1.64
CBX3P9-201ENST00000402326 DESI1Q6ICB0 168 aa4.8□□□□□ -1.64
CBX3P9-201ENST00000402326 KRTAP4-12Q9BQ66 201 aa4.8□□□□□ -1.64
CBX3P9-201ENST00000402326 APBB1O00213 710 aa4.79□□□□□ -1.64
CBX3P9-201ENST00000402326 DGAT1O75907 488 aa4.79□□□□□ -1.64
CBX3P9-201ENST00000402326 USP17L8P0C7I0 530 aa4.79□□□□□ -1.64
CBX3P9-201ENST00000402326 MSS51Q4VC12 460 aa4.79□□□□□ -1.64
CBX3P9-201ENST00000402326 ZNF516Q92618 1163 aa4.79□□□□□ -1.64
CBX3P9-201ENST00000402326 SNRKQ9NRH2 765 aa4.79□□□□□ -1.64
CBX3P9-201ENST00000402326 SOCS7O14512 581 aa4.78□□□□□ -1.64
CBX3P9-201ENST00000402326 ADH1BP00325 375 aa4.78□□□□□ -1.64
CBX3P9-201ENST00000402326 UBTFP17480 764 aaKnown RBP4.78□□□□□ -1.64
CBX3P9-201ENST00000402326 JUNDP17535 347 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms