RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 BCL11BQ9C0K0 894 aaPredicted RBP17.38■□□□□ 0.37
TNRC18-203ENST00000399537 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
TNRC18-203ENST00000399537 DCTN1Q14203 1278 aa17.38■□□□□ 0.37
TNRC18-203ENST00000399537 DZIP1LQ8IYY4 767 aaKnown RBP17.38■□□□□ 0.37
TNRC18-203ENST00000399537 CCDC39Q9UFE4 941 aa17.38■□□□□ 0.37
TNRC18-203ENST00000399537 BRPF3Q9ULD4 1205 aa17.38■□□□□ 0.37
TNRC18-203ENST00000399537 MYO6Q9UM54 1294 aa17.38■□□□□ 0.37
TNRC18-203ENST00000399537 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
TNRC18-203ENST00000399537 C22orf23Q9BZE7 217 aa17.37■□□□□ 0.37
TNRC18-203ENST00000399537 ERC2O15083 957 aa17.37■□□□□ 0.37
TNRC18-203ENST00000399537 CCDC173Q0VFZ6 552 aa17.37■□□□□ 0.37
TNRC18-203ENST00000399537 ZFYVE27Q5T4F4 411 aa17.37■□□□□ 0.37
TNRC18-203ENST00000399537 NFKBIBQ15653 356 aa17.36■□□□□ 0.37
TNRC18-203ENST00000399537 CCDC191Q8NCU4 936 aa17.36■□□□□ 0.37
TNRC18-203ENST00000399537 FYB1O15117 783 aa17.36■□□□□ 0.37
TNRC18-203ENST00000399537 CWC15Q9P013 229 aaKnown RBP17.36■□□□□ 0.37
TNRC18-203ENST00000399537 RALYLQ86SE5 291 aaKnown RBP17.35■□□□□ 0.37
TNRC18-203ENST00000399537 MINK1Q8N4C8 1332 aaPredicted RBP17.35■□□□□ 0.37
TNRC18-203ENST00000399537 OFD1O75665 1012 aa17.35■□□□□ 0.37
TNRC18-203ENST00000399537 RBM33Q96EV2 1170 aaKnown RBP17.35■□□□□ 0.37
TNRC18-203ENST00000399537 APAF1O14727 1248 aa17.35■□□□□ 0.37
TNRC18-203ENST00000399537 TTLL5Q6EMB2 1281 aa17.34■□□□□ 0.37
TNRC18-203ENST00000399537 R3HCC1Q9Y3T6 440 aaKnown RBP17.34■□□□□ 0.37
TNRC18-203ENST00000399537 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.372e-7■■■■□ 24.1
TNRC18-203ENST00000399537 NUCB2P80303 420 aa17.34■□□□□ 0.37
TNRC18-203ENST00000399537 FKBP5Q13451 457 aaPredicted RBP17.34■□□□□ 0.37
TNRC18-203ENST00000399537 CCDC7Q96M83 1385 aa17.33■□□□□ 0.37
TNRC18-203ENST00000399537 API5Q9BZZ5 524 aaKnown RBP17.33■□□□□ 0.36
TNRC18-203ENST00000399537 PANK1Q8TE04 598 aa17.32■□□□□ 0.36
TNRC18-203ENST00000399537 H0YHG0 523 aa17.32■□□□□ 0.36
TNRC18-203ENST00000399537 RIPK4P57078 832 aa17.31■□□□□ 0.36
TNRC18-203ENST00000399537 KIF7Q2M1P5 1343 aa17.31■□□□□ 0.36
TNRC18-203ENST00000399537 RSPH4AQ5TD94 716 aa17.31■□□□□ 0.36
TNRC18-203ENST00000399537 CCDC27Q2M243 656 aa17.31■□□□□ 0.36
TNRC18-203ENST00000399537 DIAPH1O60610 1272 aaKnown RBP17.3■□□□□ 0.36
TNRC18-203ENST00000399537 SMC2O95347 1197 aa17.3■□□□□ 0.36
TNRC18-203ENST00000399537 KIF21BO75037 1637 aa17.3■□□□□ 0.36
TNRC18-203ENST00000399537 TMEM132AQ24JP5 1023 aa17.3■□□□□ 0.36
TNRC18-203ENST00000399537 MRE11P49959 708 aa17.29■□□□□ 0.36
TNRC18-203ENST00000399537 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
TNRC18-203ENST00000399537 XBP1P17861 261 aa17.29■□□□□ 0.36
TNRC18-203ENST00000399537 KLHL34Q8N239 644 aa17.29■□□□□ 0.36
TNRC18-203ENST00000399537 PSME1Q06323 249 aa17.28■□□□□ 0.36
TNRC18-203ENST00000399537 HSP90AB4PQ58FF6 505 aa17.28■□□□□ 0.36
TNRC18-203ENST00000399537 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
TNRC18-203ENST00000399537 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
TNRC18-203ENST00000399537 MTERF4Q7Z6M4 381 aaKnown RBP17.28■□□□□ 0.36
TNRC18-203ENST00000399537 MIA2Q96PC5 1412 aa17.28■□□□□ 0.36
TNRC18-203ENST00000399537 ERCC4Q92889 916 aaPredicted RBP17.28■□□□□ 0.36
TNRC18-203ENST00000399537 CDC45O75419 566 aa17.27■□□□□ 0.36
TNRC18-203ENST00000399537 TSPYL4Q9UJ04 414 aa17.27■□□□□ 0.36
TNRC18-203ENST00000399537 LNPKQ9C0E8 428 aa17.27■□□□□ 0.36
TNRC18-203ENST00000399537 FGD6Q6ZV73 1430 aa17.27■□□□□ 0.36
TNRC18-203ENST00000399537 KDM4AO75164 1064 aa17.27■□□□□ 0.36
TNRC18-203ENST00000399537 NEUROD6Q96NK8 337 aa17.27■□□□□ 0.35
TNRC18-203ENST00000399537 MTMR7Q9Y216 660 aa17.27■□□□□ 0.35
TNRC18-203ENST00000399537 CCP110O43303 1012 aa17.27■□□□□ 0.35
TNRC18-203ENST00000399537 CDK5RAP3Q96JB5 506 aa17.27■□□□□ 0.35
TNRC18-203ENST00000399537 MAGEC2Q9UBF1 373 aaPredicted RBP17.27■□□□□ 0.35
TNRC18-203ENST00000399537 PSMA5P28066 241 aa17.26■□□□□ 0.35
TNRC18-203ENST00000399537 VGFO15240 615 aaPredicted RBP17.26■□□□□ 0.35
TNRC18-203ENST00000399537 IKQ13123 557 aaPredicted RBP17.26■□□□□ 0.35
TNRC18-203ENST00000399537 SKIDA1Q1XH10 827 aa17.26■□□□□ 0.35
TNRC18-203ENST00000399537 SDF4Q9BRK5 362 aa17.26■□□□□ 0.35
TNRC18-203ENST00000399537 BRD4O60885 1362 aaPredicted RBP17.25■□□□□ 0.35
TNRC18-203ENST00000399537 TRIM5Q9C035 493 aa17.25■□□□□ 0.35
TNRC18-203ENST00000399537 KINO60870 393 aaKnown RBP17.25■□□□□ 0.35
TNRC18-203ENST00000399537 SART3Q15020 963 aaKnown RBP17.25■□□□□ 0.35
TNRC18-203ENST00000399537 CNTROBQ8N137 903 aa17.25■□□□□ 0.35
TNRC18-203ENST00000399537 CAVIN1Q6NZI2 390 aaKnown RBP17.25■□□□□ 0.35
TNRC18-203ENST00000399537 RUNDC1Q96C34 613 aa17.25■□□□□ 0.35
TNRC18-203ENST00000399537 MYOM3Q5VTT5 1437 aa17.24■□□□□ 0.35
TNRC18-203ENST00000399537 SUPT6HQ7KZ85 1726 aaKnown RBP17.24■□□□□ 0.35
TNRC18-203ENST00000399537 RNF214Q8ND24 703 aa17.24■□□□□ 0.35
TNRC18-203ENST00000399537 ZRSR2Q15696 482 aaKnown RBP17.24■□□□□ 0.35
TNRC18-203ENST00000399537 SMARCE1Q969G3 411 aa17.24■□□□□ 0.35
TNRC18-203ENST00000399537 AKNAQ7Z591 1439 aa17.24■□□□□ 0.35
TNRC18-203ENST00000399537 AAMPQ13685 434 aa17.24■□□□□ 0.35
TNRC18-203ENST00000399537 RIC3Q7Z5B4 369 aa17.24■□□□□ 0.35
TNRC18-203ENST00000399537 LETM1O95202 739 aaPredicted RBP17.23■□□□□ 0.35
TNRC18-203ENST00000399537 AXDND1Q5T1B0 1012 aaPredicted RBP17.23■□□□□ 0.35
TNRC18-203ENST00000399537 TSPYL1Q9H0U9 437 aa17.23■□□□□ 0.35
TNRC18-203ENST00000399537 TSPY26PQ9H489 355 aa17.23■□□□□ 0.35
TNRC18-203ENST00000399537 PAF1Q8N7H5 531 aa17.23■□□□□ 0.35
TNRC18-203ENST00000399537 UBTFL1P0CB47 393 aaPredicted RBP17.22■□□□□ 0.35
TNRC18-203ENST00000399537 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
TNRC18-203ENST00000399537 TXLNAP40222 546 aa17.22■□□□□ 0.35
TNRC18-203ENST00000399537 SLC3A2P08195 630 aaKnown RBP17.21■□□□□ 0.35
TNRC18-203ENST00000399537 ERLIN2O94905 339 aa17.21■□□□□ 0.35
TNRC18-203ENST00000399537 AIMP1Q12904 312 aaKnown RBP17.21■□□□□ 0.35
TNRC18-203ENST00000399537 GNAI1P63096 354 aa17.21■□□□□ 0.35
TNRC18-203ENST00000399537 GOLGA6L10A6NI86 522 aa17.21■□□□□ 0.34
TNRC18-203ENST00000399537 SYCP1Q15431 976 aa17.21■□□□□ 0.34
TNRC18-203ENST00000399537 WWC2Q6AWC2 1192 aa17.2■□□□□ 0.34
TNRC18-203ENST00000399537 KRT18P05783 430 aaKnown RBP17.2■□□□□ 0.34
TNRC18-203ENST00000399537 PLCD4Q9BRC7 762 aa17.2■□□□□ 0.34
TNRC18-203ENST00000399537 HMOX1P09601 288 aa17.2■□□□□ 0.34
TNRC18-203ENST00000399537 TRAK2O60296 914 aa17.2■□□□□ 0.34
TNRC18-203ENST00000399537 LEKR1Q6ZMV7 388 aa17.2■□□□□ 0.34
TNRC18-203ENST00000399537 TBC1D2BQ9UPU7 963 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms