RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 RTEL1-TNFRSF6BF6WH68 1400 aa14.29□□□□□ -0.12
MSL3-207ENST00000398527 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
MSL3-207ENST00000398527 MBD5Q9P267 1494 aa14.28□□□□□ -0.12
MSL3-207ENST00000398527 WASHC2CQ9Y4E1 1318 aa14.28□□□□□ -0.12
MSL3-207ENST00000398527 SPATA31E1Q6ZUB1 1445 aa14.27□□□□□ -0.12
MSL3-207ENST00000398527 SCAF11Q99590 1463 aaKnown RBP14.27□□□□□ -0.12
MSL3-207ENST00000398527 JCADQ9P266 1359 aa14.27□□□□□ -0.13
MSL3-207ENST00000398527 KIF3BO15066 747 aa14.26□□□□□ -0.13
MSL3-207ENST00000398527 HSPA5P11021 654 aaKnown RBP14.26□□□□□ -0.13
MSL3-207ENST00000398527 RBM19Q9Y4C8 960 aaKnown RBP14.26□□□□□ -0.13
MSL3-207ENST00000398527 CWC22Q9HCG8 908 aaKnown RBP14.26□□□□□ -0.13
MSL3-207ENST00000398527 WASHC2AQ641Q2 1341 aa14.25□□□□□ -0.13
MSL3-207ENST00000398527 L3MBTL2Q969R5 705 aa14.25□□□□□ -0.13
MSL3-207ENST00000398527 PHLPP1O60346 1717 aa14.25□□□□□ -0.13
MSL3-207ENST00000398527 UBR1Q8IWV7 1749 aa14.24□□□□□ -0.13
MSL3-207ENST00000398527 RTL5Q5HYW3 569 aaPredicted RBP14.24□□□□□ -0.13
MSL3-207ENST00000398527 ZNF772Q68DY9 489 aaPredicted RBP14.24□□□□□ -0.13
MSL3-207ENST00000398527 FOXD1Q16676 465 aa14.24□□□□□ -0.13
MSL3-207ENST00000398527 TMEM94Q12767 1356 aa14.23□□□□□ -0.13
MSL3-207ENST00000398527 CCDC7Q96M83 1385 aa14.23□□□□□ -0.13
MSL3-207ENST00000398527 CDK12Q9NYV4 1490 aaPredicted RBP14.23□□□□□ -0.13
MSL3-207ENST00000398527 ARHGAP23Q9P227 1491 aa14.23□□□□□ -0.13
MSL3-207ENST00000398527 ZNF526Q8TF50 670 aaPredicted RBP14.23□□□□□ -0.13
MSL3-207ENST00000398527 ANKRD50Q9ULJ7 1429 aa14.22□□□□□ -0.13
MSL3-207ENST00000398527 LRP6O75581 1613 aa14.22□□□□□ -0.13
MSL3-207ENST00000398527 SLIT1O75093 1534 aa14.22□□□□□ -0.13
MSL3-207ENST00000398527 CCDC141Q6ZP82 1450 aa14.22□□□□□ -0.13
MSL3-207ENST00000398527 NECTIN2Q92692 538 aa14.21□□□□□ -0.13
MSL3-207ENST00000398527 SRCAPQ6ZRS2 3230 aa14.21□□□□□ -0.13
MSL3-207ENST00000398527 ERVK-7P63135 1459 aa14.21□□□□□ -0.13
MSL3-207ENST00000398527 PTMAP06454 111 aaKnown RBP14.21□□□□□ -0.13
MSL3-207ENST00000398527 MCCP23508 829 aa14.21□□□□□ -0.13
MSL3-207ENST00000398527 MAST1Q9Y2H9 1570 aa14.21□□□□□ -0.14
MSL3-207ENST00000398527 LTKP29376 864 aa14.2□□□□□ -0.14
MSL3-207ENST00000398527 HIRIP3Q9BW71 556 aaPredicted RBP14.2□□□□□ -0.14
MSL3-207ENST00000398527 PRDM4Q9UKN5 801 aa14.2□□□□□ -0.14
MSL3-207ENST00000398527 RRP9O43818 475 aaKnown RBP14.2□□□□□ -0.14
MSL3-207ENST00000398527 TSPY4P0CV99 314 aa14.2□□□□□ -0.14
MSL3-207ENST00000398527 TSPY10P0CW01 314 aa14.2□□□□□ -0.14
MSL3-207ENST00000398527 COL16A1Q07092 1604 aaPredicted RBP14.19□□□□□ -0.14
MSL3-207ENST00000398527 PTMSP20962 102 aa14.19□□□□□ -0.14
MSL3-207ENST00000398527 FAM193AP78312 1265 aa14.19□□□□□ -0.14
MSL3-207ENST00000398527 ABCC3O15438 1527 aa14.19□□□□□ -0.14
MSL3-207ENST00000398527 SPATA31A6Q5VVP1 1343 aa14.18□□□□□ -0.14
MSL3-207ENST00000398527 RXRBP28702 533 aa14.18□□□□□ -0.14
MSL3-207ENST00000398527 TXNDC2Q86VQ3 553 aa14.18□□□□□ -0.14
MSL3-207ENST00000398527 FANCIQ9NVI1 1328 aa14.18□□□□□ -0.14
MSL3-207ENST00000398527 MEX3CQ5U5Q3 659 aaKnown RBP14.18□□□□□ -0.14
MSL3-207ENST00000398527 CC2D2BQ6DHV5 1058 aa14.18□□□□□ -0.14
MSL3-207ENST00000398527 KIF15Q9NS87 1388 aa14.16□□□□□ -0.14
MSL3-207ENST00000398527 KCNA6P17658 529 aa14.15□□□□□ -0.14
MSL3-207ENST00000398527 NBPF8Q3BBV2 869 aa14.15□□□□□ -0.14
MSL3-207ENST00000398527 PRDM15P57071 1507 aaPredicted RBP14.15□□□□□ -0.14
MSL3-207ENST00000398527 RALGAPBQ86X10 1494 aa14.15□□□□□ -0.14
MSL3-207ENST00000398527 PROSER2Q86WR7 435 aaPredicted RBP14.15□□□□□ -0.14
MSL3-207ENST00000398527 SLAIN2Q9P270 581 aa14.14□□□□□ -0.15
MSL3-207ENST00000398527 EID1Q9Y6B2 187 aa14.14□□□□□ -0.15
MSL3-207ENST00000398527 NKTRP30414 1462 aaKnown RBP14.14□□□□□ -0.15
MSL3-207ENST00000398527 SHPRHQ149N8 1683 aa14.14□□□□□ -0.15
MSL3-207ENST00000398527 NEFMP07197 916 aa14.14□□□□□ -0.15
MSL3-207ENST00000398527 HSP90AA2PQ14568 343 aaPredicted RBP14.14□□□□□ -0.15
MSL3-207ENST00000398527 C11orf95C9JLR9 678 aaPredicted RBP14.13□□□□□ -0.15
MSL3-207ENST00000398527 MSH6P52701 1360 aa14.13□□□□□ -0.15
MSL3-207ENST00000398527 NWD1Q149M9 1564 aa14.13□□□□□ -0.15
MSL3-207ENST00000398527 SETQ01105 290 aaPredicted RBP14.13□□□□□ -0.15
MSL3-207ENST00000398527 PATL2C9JE40 543 aaKnown RBP14.12□□□□□ -0.15
MSL3-207ENST00000398527 CALD1Q05682 793 aaKnown RBP14.12□□□□□ -0.15
MSL3-207ENST00000398527 PRKRIP1Q9H875 184 aaPredicted RBP14.12□□□□□ -0.15
MSL3-207ENST00000398527 ROCK2O75116 1388 aaKnown RBP14.12□□□□□ -0.15
MSL3-207ENST00000398527 NUP155O75694 1391 aa14.12□□□□□ -0.15
MSL3-207ENST00000398527 FKBP8Q14318 412 aa14.11□□□□□ -0.15
MSL3-207ENST00000398527 ZNF428Q96B54 188 aa14.11□□□□□ -0.15
MSL3-207ENST00000398527 RBM33Q96EV2 1170 aaKnown RBP14.11□□□□□ -0.15
MSL3-207ENST00000398527 ZBTB7CA1YPR0 619 aa14.1□□□□□ -0.15
MSL3-207ENST00000398527 UNC13BO14795 1591 aa14.1□□□□□ -0.15
MSL3-207ENST00000398527 KIF7Q2M1P5 1343 aa14.1□□□□□ -0.15
MSL3-207ENST00000398527 RGS22Q8NE09 1264 aa14.1□□□□□ -0.15
MSL3-207ENST00000398527 TMEM2Q9UHN6 1383 aa14.1□□□□□ -0.15
MSL3-207ENST00000398527 TET3O43151 1660 aa14.09□□□□□ -0.15
MSL3-207ENST00000398527 RGS12O14924 1447 aa14.09□□□□□ -0.15
MSL3-207ENST00000398527 AHDC1Q5TGY3 1603 aaPredicted RBP14.09□□□□□ -0.15
MSL3-207ENST00000398527 KDM5AP29375 1690 aaKnown RBP14.08□□□□□ -0.16
MSL3-207ENST00000398527 MROH1Q8NDA8 1641 aa14.08□□□□□ -0.16
MSL3-207ENST00000398527 CEP152O94986 1710 aa14.08□□□□□ -0.16
MSL3-207ENST00000398527 ANAPC15P60006 121 aa14.08□□□□□ -0.16
MSL3-207ENST00000398527 PLCD3Q8N3E9 789 aa14.08□□□□□ -0.16
MSL3-207ENST00000398527 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
MSL3-207ENST00000398527 PIK3C2BO00750 1634 aa14.07□□□□□ -0.16
MSL3-207ENST00000398527 LAMC1P11047 1609 aa14.07□□□□□ -0.16
MSL3-207ENST00000398527 EIF2AK4Q9P2K8 1649 aaKnown RBP14.07□□□□□ -0.16
MSL3-207ENST00000398527 SETBP1Q9Y6X0 1596 aa14.07□□□□□ -0.16
MSL3-207ENST00000398527 CFAP65Q6ZU64 1925 aaKnown RBP14.07□□□□□ -0.16
MSL3-207ENST00000398527 DUOX2Q9NRD8 1548 aa14.07□□□□□ -0.16
MSL3-207ENST00000398527 USP47Q96K76 1375 aa14.07□□□□□ -0.16
MSL3-207ENST00000398527 OS9Q13438 667 aaPredicted RBP14.06□□□□□ -0.16
MSL3-207ENST00000398527 KTN1Q86UP2 1357 aaKnown RBP14.06□□□□□ -0.16
MSL3-207ENST00000398527 AFF2P51816 1311 aa14.06□□□□□ -0.16
MSL3-207ENST00000398527 ZBED9Q6R2W3 1325 aa14.06□□□□□ -0.16
MSL3-207ENST00000398527 CLGNO14967 610 aa14.06□□□□□ -0.16
MSL3-207ENST00000398527 ZNF830Q96NB3 372 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms