RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ATAD2BQ9ULI0 1458 aa9.34□□□□□ -0.91
SMCO1-201ENST00000397537 ERCC5P28715 1186 aaPredicted RBP9.34□□□□□ -0.91
SMCO1-201ENST00000397537 ALG2Q9H553 416 aa9.34□□□□□ -0.91
SMCO1-201ENST00000397537 TMA7Q9Y2S6 64 aaKnown RBP9.34□□□□□ -0.91
SMCO1-201ENST00000397537 ZCCHC6Q5VYS8 1495 aaKnown RBP9.34□□□□□ -0.91
SMCO1-201ENST00000397537 WDR62O43379 1518 aa9.33□□□□□ -0.92
SMCO1-201ENST00000397537 DSG2Q14126 1118 aa9.33□□□□□ -0.92
SMCO1-201ENST00000397537 TMEM164Q5U3C3 297 aa9.33□□□□□ -0.92
SMCO1-201ENST00000397537 VTI1AQ96AJ9 217 aa9.33□□□□□ -0.92
SMCO1-201ENST00000397537 CCDC61Q9Y6R9 512 aa9.33□□□□□ -0.92
SMCO1-201ENST00000397537 MRC2Q9UBG0 1479 aa9.33□□□□□ -0.92
SMCO1-201ENST00000397537 HMGXB3Q12766 1538 aa9.33□□□□□ -0.92
SMCO1-201ENST00000397537 TLDC2A0PJX2 215 aa9.33□□□□□ -0.92
SMCO1-201ENST00000397537 PAK3O75914 559 aaPredicted RBP9.33□□□□□ -0.92
SMCO1-201ENST00000397537 TSNAXIP1Q2TAA8 658 aa9.32□□□□□ -0.92
SMCO1-201ENST00000397537 EGFLAMQ63HQ2 1017 aa9.32□□□□□ -0.92
SMCO1-201ENST00000397537 FBXO33Q7Z6M2 555 aa9.32□□□□□ -0.92
SMCO1-201ENST00000397537 MAFBQ9Y5Q3 323 aaPredicted RBP9.32□□□□□ -0.92
SMCO1-201ENST00000397537 GPR37L1O60883 481 aa9.31□□□□□ -0.92
SMCO1-201ENST00000397537 ARID4AP29374 1257 aaPredicted RBP9.31□□□□□ -0.92
SMCO1-201ENST00000397537 VAC14Q08AM6 782 aa9.31□□□□□ -0.92
SMCO1-201ENST00000397537 WASHC4Q2M389 1173 aa9.31□□□□□ -0.92
SMCO1-201ENST00000397537 STK32AQ8WU08 396 aa9.31□□□□□ -0.92
SMCO1-201ENST00000397537 CCDC136Q96JN2 1154 aa9.31□□□□□ -0.92
SMCO1-201ENST00000397537 ZMIZ1Q9ULJ6 1067 aa9.31□□□□□ -0.92
SMCO1-201ENST00000397537 MAP4K4O95819 1239 aaPredicted RBP9.31□□□□□ -0.92
SMCO1-201ENST00000397537 GJD4Q96KN9 370 aaPredicted RBP9.31□□□□□ -0.92
SMCO1-201ENST00000397537 METTL14Q9HCE5 456 aaKnown RBP9.31□□□□□ -0.92
SMCO1-201ENST00000397537 SERPINB4P48594 390 aa9.3□□□□□ -0.92
SMCO1-201ENST00000397537 HSP90AB4PQ58FF6 505 aa9.3□□□□□ -0.92
SMCO1-201ENST00000397537 PARNO95453 639 aaKnown RBP9.29□□□□□ -0.92
SMCO1-201ENST00000397537 SPACA7Q96KW9 195 aa9.29□□□□□ -0.92
SMCO1-201ENST00000397537 POTEMA6NI47 508 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 CENPBP07199 599 aaPredicted RBP9.28□□□□□ -0.92
SMCO1-201ENST00000397537 SSFA2P28290 1259 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 FGD1P98174 961 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 NLRP7Q8WX94 980 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 PIK3R5Q8WYR1 880 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 TANGO6Q9C0B7 1094 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 CUEDC1Q9NWM3 386 aaPredicted RBP9.28□□□□□ -0.92
SMCO1-201ENST00000397537 ARAP1Q96P48 1450 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 PEX14O75381 377 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 CCDC181Q5TID7 509 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 C9orf131Q5VYM1 1079 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 ZNF710Q8N1W2 664 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 DDX12PQ92771 950 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 SLAIN2Q9P270 581 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 NDUFB9Q9Y6M9 179 aa9.28□□□□□ -0.92
SMCO1-201ENST00000397537 AP1G2O75843 785 aa9.27□□□□□ -0.93
SMCO1-201ENST00000397537 PSME1Q06323 249 aa9.27□□□□□ -0.93
SMCO1-201ENST00000397537 SDE2Q6IQ49 451 aa9.27□□□□□ -0.93
SMCO1-201ENST00000397537 MAFGO15525 162 aa9.26□□□□□ -0.93
SMCO1-201ENST00000397537 MCCD1P59942 119 aaPredicted RBP9.26□□□□□ -0.93
SMCO1-201ENST00000397537 HDLBPQ00341 1268 aaKnown RBP9.26□□□□□ -0.93
SMCO1-201ENST00000397537 ELOAQ14241 798 aaKnown RBP9.26□□□□□ -0.93
SMCO1-201ENST00000397537 PTPROQ16827 1216 aa9.26□□□□□ -0.93
SMCO1-201ENST00000397537 CCDC144BQ3MJ40 725 aa9.26□□□□□ -0.93
SMCO1-201ENST00000397537 RIC3Q7Z5B4 369 aa9.26□□□□□ -0.93
SMCO1-201ENST00000397537 IFNL1Q8IU54 200 aa9.26□□□□□ -0.93
SMCO1-201ENST00000397537 PRR7Q8TB68 274 aa9.26□□□□□ -0.93
SMCO1-201ENST00000397537 TBX22Q9Y458 520 aa9.26□□□□□ -0.93
SMCO1-201ENST00000397537 USP17L8P0C7I0 530 aa9.26□□□□□ -0.93
SMCO1-201ENST00000397537 CD44P16070 742 aaKnown RBP9.26□□□□□ -0.93
SMCO1-201ENST00000397537 IGBP1P78318 339 aa9.26□□□□□ -0.93
SMCO1-201ENST00000397537 DHX38Q92620 1227 aaKnown RBP9.26□□□□□ -0.93
SMCO1-201ENST00000397537 BACH2Q9BYV9 841 aa9.26□□□□□ -0.93
SMCO1-201ENST00000397537 ZRANB1Q9UGI0 708 aa9.26□□□□□ -0.93
SMCO1-201ENST00000397537 hCG_2014768A0A024R1R8 64 aa9.25□□□□□ -0.93
SMCO1-201ENST00000397537 ANAPC15P60006 121 aa9.25□□□□□ -0.93
SMCO1-201ENST00000397537 SETQ01105 290 aaPredicted RBP9.25□□□□□ -0.93
SMCO1-201ENST00000397537 NLGN1Q8N2Q7 840 aa9.25□□□□□ -0.93
SMCO1-201ENST00000397537 MORC4Q8TE76 937 aa9.25□□□□□ -0.93
SMCO1-201ENST00000397537 KCNB2Q92953 911 aa9.25□□□□□ -0.93
SMCO1-201ENST00000397537 PRDM10Q9NQV6 1147 aa9.25□□□□□ -0.93
SMCO1-201ENST00000397537 BIN2Q9UBW5 565 aaPredicted RBP9.25□□□□□ -0.93
SMCO1-201ENST00000397537 MAP3K13O43283 966 aa9.24□□□□□ -0.93
SMCO1-201ENST00000397537 RAD51AP2Q09MP3 1159 aa9.24□□□□□ -0.93
SMCO1-201ENST00000397537 KANK4Q5T7N3 995 aaPredicted RBP9.24□□□□□ -0.93
SMCO1-201ENST00000397537 TBC1D9Q6ZT07 1266 aa9.24□□□□□ -0.93
SMCO1-201ENST00000397537 PTGER2P43116 358 aa9.24□□□□□ -0.93
SMCO1-201ENST00000397537 QPCTQ16769 361 aa9.24□□□□□ -0.93
SMCO1-201ENST00000397537 APBB1IPQ7Z5R6 666 aaPredicted RBP9.24□□□□□ -0.93
SMCO1-201ENST00000397537 L3MBTL3Q96JM7 780 aaPredicted RBP9.24□□□□□ -0.93
SMCO1-201ENST00000397537 PIF1Q9H611 641 aa9.24□□□□□ -0.93
SMCO1-201ENST00000397537 SPTY2D1Q68D10 685 aaPredicted RBP9.23□□□□□ -0.93
SMCO1-201ENST00000397537 POTEGQ6S5H5 508 aa9.23□□□□□ -0.93
SMCO1-201ENST00000397537 KIF12Q96FN5 646 aa9.23□□□□□ -0.93
SMCO1-201ENST00000397537 SGSM3Q96HU1 749 aa9.23□□□□□ -0.93
SMCO1-201ENST00000397537 DIXDC1Q155Q3 683 aa9.22□□□□□ -0.93
SMCO1-201ENST00000397537 NPDC1Q9NQX5 325 aaPredicted RBP9.22□□□□□ -0.93
SMCO1-201ENST00000397537 TUSC1Q2TAM9 212 aa9.21□□□□□ -0.93
SMCO1-201ENST00000397537 PLCD4Q9BRC7 762 aa9.21□□□□□ -0.93
SMCO1-201ENST00000397537 TINF2Q9BSI4 451 aa9.21□□□□□ -0.93
SMCO1-201ENST00000397537 CCDC194A0A1B0GVG4 234 aa9.21□□□□□ -0.94
SMCO1-201ENST00000397537 MAP3K9P80192 1104 aa9.21□□□□□ -0.94
SMCO1-201ENST00000397537 CSPP1Q1MSJ5 1256 aa9.21□□□□□ -0.94
SMCO1-201ENST00000397537 PHF12Q96QT6 1004 aa9.21□□□□□ -0.94
SMCO1-201ENST00000397537 PRKAG2Q9UGJ0 569 aa9.21□□□□□ -0.94
SMCO1-201ENST00000397537 FOXK1P85037 733 aa9.2□□□□□ -0.94
SMCO1-201ENST00000397537 TCEAL1Q15170 157 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms