RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 NCOA3Q9Y6Q9 1424 aa13.8□□□□□ -0.2
DDX39B-202ENST00000396172 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
DDX39B-202ENST00000396172 TMF1P82094 1093 aa13.79□□□□□ -0.2
DDX39B-202ENST00000396172 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
DDX39B-202ENST00000396172 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
DDX39B-202ENST00000396172 TULP4Q9NRJ4 1543 aa13.79□□□□□ -0.2
DDX39B-202ENST00000396172 MYOM1P52179 1685 aa13.78□□□□□ -0.2
DDX39B-202ENST00000396172 TESK2Q96S53 571 aa13.78□□□□□ -0.2
DDX39B-202ENST00000396172 ADGRL3Q9HAR2 1447 aa13.78□□□□□ -0.2
DDX39B-202ENST00000396172 EVC2Q86UK5 1308 aa13.77□□□□□ -0.21
DDX39B-202ENST00000396172 TOPAZ1Q8N9V7 1692 aa13.77□□□□□ -0.21
DDX39B-202ENST00000396172 PLEKHH1Q9ULM0 1364 aa13.76□□□□□ -0.21
DDX39B-202ENST00000396172 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-202ENST00000396172 DCCP43146 1447 aa13.75□□□□□ -0.21
DDX39B-202ENST00000396172 WAPLQ7Z5K2 1190 aa13.75□□□□□ -0.21
DDX39B-202ENST00000396172 HIRIP3Q9BW71 556 aaPredicted RBP13.75□□□□□ -0.21
DDX39B-202ENST00000396172 DISP3Q9P2K9 1392 aa13.74□□□□□ -0.21
DDX39B-202ENST00000396172 SAFB2Q14151 953 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDX39B-202ENST00000396172 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
DDX39B-202ENST00000396172 LRRC7Q96NW7 1537 aa13.74□□□□□ -0.21
DDX39B-202ENST00000396172 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
DDX39B-202ENST00000396172 PROSER2Q86WR7 435 aaPredicted RBP13.73□□□□□ -0.21
DDX39B-202ENST00000396172 LTBP4Q8N2S1 1624 aa13.73□□□□□ -0.21
DDX39B-202ENST00000396172 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
DDX39B-202ENST00000396172 ZNF335Q9H4Z2 1342 aaPredicted RBP13.73□□□□□ -0.21
DDX39B-202ENST00000396172 ATAD2Q6PL18 1390 aa13.73□□□□□ -0.21
DDX39B-202ENST00000396172 NINLQ9Y2I6 1382 aa13.72□□□□□ -0.21
DDX39B-202ENST00000396172 AKAP12Q02952 1782 aa13.72□□□□□ -0.21
DDX39B-202ENST00000396172 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
DDX39B-202ENST00000396172 TMEM94Q12767 1356 aa13.71□□□□□ -0.21
DDX39B-202ENST00000396172 USP32Q8NFA0 1604 aa13.71□□□□□ -0.21
DDX39B-202ENST00000396172 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.21
DDX39B-202ENST00000396172 C14orf37Q86TY3 774 aa13.71□□□□□ -0.21
DDX39B-202ENST00000396172 KIF7Q2M1P5 1343 aa13.71□□□□□ -0.22
DDX39B-202ENST00000396172 MSH6P52701 1360 aa13.7□□□□□ -0.22
DDX39B-202ENST00000396172 WASLO00401 505 aaPredicted RBP13.7□□□□□ -0.22
DDX39B-202ENST00000396172 ATP7BP35670 1465 aa13.69□□□□□ -0.22
DDX39B-202ENST00000396172 SRPK2P78362 688 aaKnown RBP13.69□□□□□ -0.22
DDX39B-202ENST00000396172 WASHC2AQ641Q2 1341 aa13.69□□□□□ -0.22
DDX39B-202ENST00000396172 MON2Q7Z3U7 1717 aa13.69□□□□□ -0.22
DDX39B-202ENST00000396172 IQSEC2Q5JU85 1478 aa13.68□□□□□ -0.22
DDX39B-202ENST00000396172 CDK19Q9BWU1 502 aa13.67□□□□□ -0.22
DDX39B-202ENST00000396172 C19orf44Q9H6X5 657 aa13.67□□□□□ -0.22
DDX39B-202ENST00000396172 POLR3GLQ9BT43 218 aa13.66□□□□□ -0.22
DDX39B-202ENST00000396172 KIF20BQ96Q89 1820 aa13.65□□□□□ -0.22
DDX39B-202ENST00000396172 C11orf95C9JLR9 678 aaPredicted RBP13.65□□□□□ -0.22
DDX39B-202ENST00000396172 ATF3P18847 181 aa13.64□□□□□ -0.23
DDX39B-202ENST00000396172 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
DDX39B-202ENST00000396172 PPIP5K1Q6PFW1 1433 aa13.64□□□□□ -0.23
DDX39B-202ENST00000396172 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
DDX39B-202ENST00000396172 ANKRD26Q9UPS8 1709 aa13.63□□□□□ -0.23
DDX39B-202ENST00000396172 NRKQ7Z2Y5 1582 aa13.62□□□□□ -0.23
DDX39B-202ENST00000396172 NUDT16Q96DE0 195 aaKnown RBP13.62□□□□□ -0.23
DDX39B-202ENST00000396172 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
DDX39B-202ENST00000396172 MST1RQ04912 1400 aa13.62□□□□□ -0.23
DDX39B-202ENST00000396172 ANKRD36BQ8N2N9 1353 aa13.61□□□□□ -0.23
DDX39B-202ENST00000396172 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
DDX39B-202ENST00000396172 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
DDX39B-202ENST00000396172 TERF2IPQ9NYB0 399 aa13.6□□□□□ -0.23
DDX39B-202ENST00000396172 TMC1Q8TDI8 760 aa13.6□□□□□ -0.23
DDX39B-202ENST00000396172 NHSL1Q5SYE7 1610 aa13.59□□□□□ -0.23
DDX39B-202ENST00000396172 PRR36Q9H6K5 1346 aa13.59□□□□□ -0.23
DDX39B-202ENST00000396172 HDGFL2Q7Z4V5 671 aaPredicted RBP13.58□□□□□ -0.23
DDX39B-202ENST00000396172 CD163L1Q9NR16 1453 aa13.58□□□□□ -0.24
DDX39B-202ENST00000396172 DDX10Q13206 875 aaKnown RBP13.58□□□□□ -0.24
DDX39B-202ENST00000396172 ROBO1Q9Y6N7 1651 aa13.57□□□□□ -0.24
DDX39B-202ENST00000396172 A0A1W2PP64 1363 aa13.57□□□□□ -0.24
DDX39B-202ENST00000396172 POLR3AO14802 1390 aaPredicted RBP13.57□□□□□ -0.24
DDX39B-202ENST00000396172 BRD4O60885 1362 aaPredicted RBP13.57□□□□□ -0.24
DDX39B-202ENST00000396172 PLEKHG3A1L390 1219 aa13.57□□□□□ -0.24
DDX39B-202ENST00000396172 CPSF1Q10570 1443 aaKnown RBP13.57□□□□□ -0.24
DDX39B-202ENST00000396172 USP54Q70EL1 1684 aa13.56□□□□□ -0.24
DDX39B-202ENST00000396172 NUTM2FA1L443 756 aa13.56□□□□□ -0.24
DDX39B-202ENST00000396172 CABP1Q9NZU7 370 aa13.56□□□□□ -0.24
DDX39B-202ENST00000396172 TRPM3Q9HCF6 1732 aaPredicted RBP13.56□□□□□ -0.24
DDX39B-202ENST00000396172 EDC4Q6P2E9 1401 aaKnown RBP13.56□□□□□ -0.24
DDX39B-202ENST00000396172 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
DDX39B-202ENST00000396172 SLC12A5Q9H2X9 1139 aa13.55□□□□□ -0.24
DDX39B-202ENST00000396172 PHF8Q9UPP1 1060 aa13.55□□□□□ -0.24
DDX39B-202ENST00000396172 KTN1Q86UP2 1357 aaKnown RBP13.55□□□□□ -0.24
DDX39B-202ENST00000396172 NSD3Q9BZ95 1437 aa13.54□□□□□ -0.24
DDX39B-202ENST00000396172 PANK3Q9H999 370 aa13.54□□□□□ -0.24
DDX39B-202ENST00000396172 USP6P35125 1406 aa13.54□□□□□ -0.24
DDX39B-202ENST00000396172 ESCO1Q5FWF5 840 aa13.54□□□□□ -0.24
DDX39B-202ENST00000396172 NSD2O96028 1365 aa13.53□□□□□ -0.24
DDX39B-202ENST00000396172 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
DDX39B-202ENST00000396172 KNSTRNQ9Y448 316 aa13.53□□□□□ -0.24
DDX39B-202ENST00000396172 ACEP12821 1306 aa13.53□□□□□ -0.24
DDX39B-202ENST00000396172 SLAIN2Q9P270 581 aa13.52□□□□□ -0.24
DDX39B-202ENST00000396172 ALS2Q96Q42 1657 aa13.52□□□□□ -0.24
DDX39B-202ENST00000396172 AHDC1Q5TGY3 1603 aaPredicted RBP13.52□□□□□ -0.25
DDX39B-202ENST00000396172 NPC1L1Q9UHC9 1359 aa13.52□□□□□ -0.25
DDX39B-202ENST00000396172 TOM1O60784 492 aa13.52□□□□□ -0.25
DDX39B-202ENST00000396172 DIEXFQ68CQ4 756 aaKnown RBP13.52□□□□□ -0.25
DDX39B-202ENST00000396172 PIK3C2AO00443 1686 aa13.51□□□□□ -0.25
DDX39B-202ENST00000396172 PHLPP1O60346 1717 aa13.51□□□□□ -0.25
DDX39B-202ENST00000396172 CERKQ8TCT0 537 aa13.51□□□□□ -0.25
DDX39B-202ENST00000396172 CGNL1Q0VF96 1302 aa13.5□□□□□ -0.25
DDX39B-202ENST00000396172 NPHP3Q7Z494 1330 aa13.5□□□□□ -0.25
DDX39B-202ENST00000396172 PMFBP1Q8TBY8 1022 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms