RNA–Protein interactions for RNA: ENST00000395432.6

PCDH15-208, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 6,901 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-208	ENST00000395432	CD109	Q6YHK3	1445 aa		4.95	□□□□□ -1.62
PCDH15-208	ENST00000395432	SHPRH	Q149N8	1683 aa		4.95	□□□□□ -1.62
PCDH15-208	ENST00000395432	ALS2	Q96Q42	1657 aa		4.95	□□□□□ -1.62
PCDH15-208	ENST00000395432	KDM4A	O75164	1064 aa		4.95	□□□□□ -1.62
PCDH15-208	ENST00000395432	TAF7L	Q5H9L4	462 aa		4.95	□□□□□ -1.62
PCDH15-208	ENST00000395432	ZNF592	Q92610	1267 aa		4.95	□□□□□ -1.62
PCDH15-208	ENST00000395432	AK7	Q96M32	723 aa		4.95	□□□□□ -1.62
PCDH15-208	ENST00000395432	CCDC18	Q5T9S5	1454 aa		4.95	□□□□□ -1.62
PCDH15-208	ENST00000395432	VPS8	Q8N3P4	1428 aa		4.95	□□□□□ -1.62
PCDH15-208	ENST00000395432	APLP2	Q06481	763 aa		4.94	□□□□□ -1.62
PCDH15-208	ENST00000395432	ENOX2	Q16206	610 aa	Known RBP	4.94	□□□□□ -1.62
PCDH15-208	ENST00000395432	RSPH6A	Q9H0K4	717 aa		4.94	□□□□□ -1.62
PCDH15-208	ENST00000395432	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.94	□□□□□ -1.62
PCDH15-208	ENST00000395432	BRD2	P25440	801 aa	Known RBP	4.94	□□□□□ -1.62
PCDH15-208	ENST00000395432	AAMP	Q13685	434 aa		4.94	□□□□□ -1.62
PCDH15-208	ENST00000395432	WWC1	Q8IX03	1113 aa		4.93	□□□□□ -1.62
PCDH15-208	ENST00000395432	PMFBP1	Q8TBY8	1022 aa		4.93	□□□□□ -1.62
PCDH15-208	ENST00000395432	CWC22	Q9HCG8	908 aa	Known RBP	4.93	□□□□□ -1.62
PCDH15-208	ENST00000395432		E9PSI1	815 aa		4.93	□□□□□ -1.62
PCDH15-208	ENST00000395432	VASP	P50552	380 aa	Predicted RBP	4.93	□□□□□ -1.62
PCDH15-208	ENST00000395432	GPBP1L1	Q9HC44	474 aa	Predicted RBP	4.93	□□□□□ -1.62
PCDH15-208	ENST00000395432	PAPPA	Q13219	1627 aa		4.93	□□□□□ -1.62
PCDH15-208	ENST00000395432	CSPP1	Q1MSJ5	1256 aa		4.93	□□□□□ -1.62
PCDH15-208	ENST00000395432	PZP	P20742	1482 aa		4.92	□□□□□ -1.62
PCDH15-208	ENST00000395432	PRDM10	Q9NQV6	1147 aa		4.92	□□□□□ -1.62
PCDH15-208	ENST00000395432	NEXMIF	Q5QGS0	1516 aa		4.92	□□□□□ -1.62
PCDH15-208	ENST00000395432	ASXL2	Q76L83	1435 aa		4.92	□□□□□ -1.62
PCDH15-208	ENST00000395432	NRAP	Q86VF7	1730 aa		4.92	□□□□□ -1.62
PCDH15-208	ENST00000395432	PTPRM	P28827	1452 aa		4.91	□□□□□ -1.62
PCDH15-208	ENST00000395432	ZNF646	O15015	1829 aa	Predicted RBP	4.91	□□□□□ -1.62
PCDH15-208	ENST00000395432	KIAA1551	Q9HCM1	1747 aa		4.91	□□□□□ -1.62
PCDH15-208	ENST00000395432	CCDC82	Q8N4S0	544 aa		4.91	□□□□□ -1.62
PCDH15-208	ENST00000395432	NCOA3	Q9Y6Q9	1424 aa		4.91	□□□□□ -1.62
PCDH15-208	ENST00000395432	BCL11B	Q9C0K0	894 aa	Predicted RBP	4.9	□□□□□ -1.62
PCDH15-208	ENST00000395432	SPATA31E1	Q6ZUB1	1445 aa		4.9	□□□□□ -1.62
PCDH15-208	ENST00000395432	NKTR	P30414	1462 aa	Known RBP	4.9	□□□□□ -1.62
PCDH15-208	ENST00000395432	SHANK3	Q9BYB0	1731 aa		4.9	□□□□□ -1.62
PCDH15-208	ENST00000395432	LMOD3	Q0VAK6	560 aa		4.9	□□□□□ -1.62
PCDH15-208	ENST00000395432	ACIN1	Q9UKV3	1341 aa	Known RBP	4.9	□□□□□ -1.62
PCDH15-208	ENST00000395432	ROCK1	Q13464	1354 aa		4.9	□□□□□ -1.63
PCDH15-208	ENST00000395432	DPF3	Q92784	378 aa		4.9	□□□□□ -1.63
PCDH15-208	ENST00000395432	WWC3	Q9ULE0	1092 aa		4.9	□□□□□ -1.63
PCDH15-208	ENST00000395432	ATP7A	Q04656	1500 aa		4.9	□□□□□ -1.63
PCDH15-208	ENST00000395432	DLC1	Q96QB1	1528 aa		4.9	□□□□□ -1.63
PCDH15-208	ENST00000395432	BBX	Q8WY36	941 aa	Predicted RBP	4.89	□□□□□ -1.63
PCDH15-208	ENST00000395432	TCERG1	O14776	1098 aa	Known RBP	4.89	□□□□□ -1.63
PCDH15-208	ENST00000395432	NUTM2F	A1L443	756 aa		4.89	□□□□□ -1.63
PCDH15-208	ENST00000395432	FOXD1	Q16676	465 aa		4.89	□□□□□ -1.63
PCDH15-208	ENST00000395432	WDR75	Q8IWA0	830 aa	Known RBP	4.89	□□□□□ -1.63
PCDH15-208	ENST00000395432	MYOM1	P52179	1685 aa		4.88	□□□□□ -1.63
PCDH15-208	ENST00000395432	PRG4	Q92954	1404 aa	Predicted RBP	4.88	□□□□□ -1.63
PCDH15-208	ENST00000395432	AFDN	P55196	1824 aa	Known RBP	4.88	□□□□□ -1.63
PCDH15-208	ENST00000395432	TRIM63	Q969Q1	353 aa		4.88	□□□□□ -1.63
PCDH15-208	ENST00000395432	ZNF316	A6NFI3	1004 aa	Predicted RBP	4.88	□□□□□ -1.63
PCDH15-208	ENST00000395432	MAPK8IP2	Q13387	824 aa	Predicted RBP	4.88	□□□□□ -1.63
PCDH15-208	ENST00000395432	GOLGA6L1	Q8N7Z2	621 aa		4.87	□□□□□ -1.63
PCDH15-208	ENST00000395432	MPHOSPH10	O00566	681 aa	Known RBP	4.87	□□□□□ -1.63
PCDH15-208	ENST00000395432	CCAR1	Q8IX12	1150 aa	Known RBP	4.87	□□□□□ -1.63
PCDH15-208	ENST00000395432	ZFP91	Q96JP5	570 aa	Predicted RBP	4.87	□□□□□ -1.63
PCDH15-208	ENST00000395432	RGPD1	P0DJD0	1748 aa		4.87	□□□□□ -1.63
PCDH15-208	ENST00000395432	CLEC11A	Q9Y240	323 aa		4.87	□□□□□ -1.63
PCDH15-208	ENST00000395432	CARMIL1	Q5VZK9	1371 aa		4.87	□□□□□ -1.63
PCDH15-208	ENST00000395432	COL16A1	Q07092	1604 aa	Predicted RBP	4.87	□□□□□ -1.63
PCDH15-208	ENST00000395432	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.87	□□□□□ -1.63
PCDH15-208	ENST00000395432	NCOA1	Q15788	1441 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	TSPY2	A6NKD2	308 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	TSPY3	P0CV98	308 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	TSPY8	P0CW00	308 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	TSPY1	Q01534	308 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	RGL2	O15211	777 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	WDR43	Q15061	677 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	TDRD9	Q8NDG6	1382 aa	Known RBP	4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	IGSF3	O75054	1194 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	SSH2	Q76I76	1423 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	CHMP3	Q9Y3E7	222 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	CARNS1	A5YM72	827 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	CAPN15	O75808	1086 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	ABL2	P42684	1182 aa		4.86	□□□□□ -1.63
PCDH15-208	ENST00000395432	C1orf167	Q5SNV9	1468 aa		4.85	□□□□□ -1.63
PCDH15-208	ENST00000395432	PLEKHG2	Q9H7P9	1386 aa		4.85	□□□□□ -1.63
PCDH15-208	ENST00000395432	LRRC9	Q6ZRR7	1453 aa		4.85	□□□□□ -1.63
PCDH15-208	ENST00000395432	NLRP1	Q9C000	1473 aa		4.85	□□□□□ -1.63
PCDH15-208	ENST00000395432	SPOCK2	Q92563	424 aa		4.85	□□□□□ -1.63
PCDH15-208	ENST00000395432	SMARCA5	O60264	1052 aa	Predicted RBP	4.85	□□□□□ -1.63
PCDH15-208	ENST00000395432	ABCB7	O75027	752 aa		4.85	□□□□□ -1.63
PCDH15-208	ENST00000395432	CLUAP1	Q96AJ1	413 aa		4.85	□□□□□ -1.63
PCDH15-208	ENST00000395432	HRC	P23327	699 aa		4.84	□□□□□ -1.63
PCDH15-208	ENST00000395432	PDE6B	P35913	854 aa		4.84	□□□□□ -1.63
PCDH15-208	ENST00000395432	PLCD4	Q9BRC7	762 aa		4.84	□□□□□ -1.63
PCDH15-208	ENST00000395432	AKAP12	Q02952	1782 aa		4.84	□□□□□ -1.63
PCDH15-208	ENST00000395432	MYOM2	P54296	1465 aa		4.84	□□□□□ -1.63
PCDH15-208	ENST00000395432	THSD7A	Q9UPZ6	1657 aa		4.84	□□□□□ -1.63
PCDH15-208	ENST00000395432	PHF14	O94880	888 aa		4.84	□□□□□ -1.64
PCDH15-208	ENST00000395432	KIF1B	O60333	1816 aa		4.84	□□□□□ -1.64
PCDH15-208	ENST00000395432	MYO5B	Q9ULV0	1848 aa		4.83	□□□□□ -1.64
PCDH15-208	ENST00000395432	CHMP7	Q8WUX9	453 aa	Predicted RBP	4.83	□□□□□ -1.64
PCDH15-208	ENST00000395432	FAM13B	Q9NYF5	915 aa		4.83	□□□□□ -1.64
PCDH15-208	ENST00000395432	PEX14	O75381	377 aa		4.83	□□□□□ -1.64
PCDH15-208	ENST00000395432	G3BP2	Q9UN86	482 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms