RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 VTI1BQ9UEU0 232 aa4.76□□□□□ -1.65
XRN1-202ENST00000392981 PRKAG2Q9UGJ0 569 aa4.76□□□□□ -1.65
XRN1-202ENST00000392981 MAPK8P45983 427 aa4.75□□□□□ -1.65
XRN1-202ENST00000392981 STK32AQ8WU08 396 aa4.75□□□□□ -1.65
XRN1-202ENST00000392981 GPR37O15354 613 aa4.75□□□□□ -1.65
XRN1-202ENST00000392981 RASA1P20936 1047 aa4.75□□□□□ -1.65
XRN1-202ENST00000392981 EAPPQ56P03 285 aaPredicted RBP4.75□□□□□ -1.65
XRN1-202ENST00000392981 CFAP70Q5T0N1 1121 aa4.75□□□□□ -1.65
XRN1-202ENST00000392981 MORC4Q8TE76 937 aa4.75□□□□□ -1.65
XRN1-202ENST00000392981 SH3BP5O60239 455 aa4.75□□□□□ -1.65
XRN1-202ENST00000392981 PPP4R4Q6NUP7 873 aa4.75□□□□□ -1.65
XRN1-202ENST00000392981 TRIM34Q9BYJ4 488 aa4.75□□□□□ -1.65
XRN1-202ENST00000392981 TMEM164Q5U3C3 297 aa4.74□□□□□ -1.65
XRN1-202ENST00000392981 PAF1Q8N7H5 531 aa4.74□□□□□ -1.65
XRN1-202ENST00000392981 MAP3K13O43283 966 aa4.74□□□□□ -1.65
XRN1-202ENST00000392981 DSG3P32926 999 aa4.74□□□□□ -1.65
XRN1-202ENST00000392981 KLHL42Q9P2K6 505 aa4.74□□□□□ -1.65
XRN1-202ENST00000392981 ATP2B4P23634 1241 aa4.74□□□□□ -1.65
XRN1-202ENST00000392981 EIF4G2P78344 907 aaKnown RBP eCLIP4.74□□□□□ -1.65
XRN1-202ENST00000392981 FAM200AQ8TCP9 573 aa4.74□□□□□ -1.65
XRN1-202ENST00000392981 CDHR5Q9HBB8 845 aa4.74□□□□□ -1.65
XRN1-202ENST00000392981 QPCTQ16769 361 aa4.74□□□□□ -1.65
XRN1-202ENST00000392981 WDR75Q8IWA0 830 aaKnown RBP4.74□□□□□ -1.65
XRN1-202ENST00000392981 HINFPQ9BQA5 517 aa4.74□□□□□ -1.65
XRN1-202ENST00000392981 OS9Q13438 667 aaPredicted RBP4.73□□□□□ -1.65
XRN1-202ENST00000392981 CC2D2BQ6DHV5 1058 aa4.73□□□□□ -1.65
XRN1-202ENST00000392981 TBC1D9Q6ZT07 1266 aa4.73□□□□□ -1.65
XRN1-202ENST00000392981 SCNN1AP37088 669 aa4.73□□□□□ -1.65
XRN1-202ENST00000392981 TAGLNQ01995 201 aaKnown RBP4.73□□□□□ -1.65
XRN1-202ENST00000392981 PRDM10Q9NQV6 1147 aa4.73□□□□□ -1.65
XRN1-202ENST00000392981 FAM217BQ9NTX9 383 aaPredicted RBP4.73□□□□□ -1.65
XRN1-202ENST00000392981 NDUFV2P19404 249 aa4.73□□□□□ -1.65
XRN1-202ENST00000392981 C1QBPQ07021 282 aaKnown RBP4.73□□□□□ -1.65
XRN1-202ENST00000392981 PRMT3O60678 531 aa4.73□□□□□ -1.65
XRN1-202ENST00000392981 OATP04181 439 aa4.73□□□□□ -1.65
XRN1-202ENST00000392981 PTGDRQ13258 359 aa4.73□□□□□ -1.65
XRN1-202ENST00000392981 FOXD4L6Q3SYB3 417 aaPredicted RBP4.73□□□□□ -1.65
XRN1-202ENST00000392981 FOXD4L3Q6VB84 417 aaPredicted RBP4.73□□□□□ -1.65
XRN1-202ENST00000392981 OSBPP22059 807 aa4.72□□□□□ -1.65
XRN1-202ENST00000392981 C6orf229H3BNL8 230 aa4.72□□□□□ -1.65
XRN1-202ENST00000392981 FAM161BQ96MY7 647 aa4.72□□□□□ -1.65
XRN1-202ENST00000392981 LOC102724159A0A0B4J2E5 919 aa4.72□□□□□ -1.65
XRN1-202ENST00000392981 PDE3BQ13370 1112 aa4.72□□□□□ -1.65
XRN1-202ENST00000392981 PWP2Q15269 919 aaKnown RBP4.72□□□□□ -1.65
XRN1-202ENST00000392981 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.72□□□□□ -1.65
XRN1-202ENST00000392981 SLKQ9H2G2 1235 aaPredicted RBP4.72□□□□□ -1.65
XRN1-202ENST00000392981 PPP1R12AO14974 1030 aaPredicted RBP4.72□□□□□ -1.65
XRN1-202ENST00000392981 NPHP1O15259 732 aa4.72□□□□□ -1.65
XRN1-202ENST00000392981 S100BP04271 92 aaPredicted RBP4.72□□□□□ -1.65
XRN1-202ENST00000392981 HSP90AB4PQ58FF6 505 aa4.72□□□□□ -1.65
XRN1-202ENST00000392981 NT5DC4Q86YG4 428 aa4.72□□□□□ -1.65
XRN1-202ENST00000392981 PRDM16Q9HAZ2 1276 aa4.72□□□□□ -1.65
XRN1-202ENST00000392981 MAFBQ9Y5Q3 323 aaPredicted RBP4.72□□□□□ -1.65
XRN1-202ENST00000392981 PLEKHD1A6NEE1 506 aa4.71□□□□□ -1.65
XRN1-202ENST00000392981 CHMP4BP1P59074 171 aa4.71□□□□□ -1.65
XRN1-202ENST00000392981 GABBR1Q9UBS5 961 aa4.71□□□□□ -1.65
XRN1-202ENST00000392981 R3HCC1Q9Y3T6 440 aaKnown RBP4.71□□□□□ -1.65
XRN1-202ENST00000392981 RIPOR2Q9Y4F9 1068 aa4.71□□□□□ -1.65
XRN1-202ENST00000392981 CCDC144BQ3MJ40 725 aa4.71□□□□□ -1.66
XRN1-202ENST00000392981 VPS37DQ86XT2 251 aa4.71□□□□□ -1.66
XRN1-202ENST00000392981 LNPKQ9C0E8 428 aa4.71□□□□□ -1.66
XRN1-202ENST00000392981 WWC3Q9ULE0 1092 aa4.71□□□□□ -1.66
XRN1-202ENST00000392981 MOXD2PA6NHM9 499 aa4.71□□□□□ -1.66
XRN1-202ENST00000392981 STK10O94804 968 aaKnown RBP4.71□□□□□ -1.66
XRN1-202ENST00000392981 INPP5FQ9Y2H2 1132 aa4.71□□□□□ -1.66
XRN1-202ENST00000392981 CCAR1Q8IX12 1150 aaKnown RBP4.71□□□□□ -1.66
XRN1-202ENST00000392981 ATG7O95352 703 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 PTPROQ16827 1216 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 CEP89Q96ST8 783 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 BACH2Q9BYV9 841 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 U2SURPO15042 1029 aaKnown RBP4.7□□□□□ -1.66
XRN1-202ENST00000392981 RTL5Q5HYW3 569 aaPredicted RBP4.7□□□□□ -1.66
XRN1-202ENST00000392981 ZCRB1Q8TBF4 217 aaKnown RBP4.7□□□□□ -1.66
XRN1-202ENST00000392981 RBM46Q8TBY0 533 aaKnown RBP4.7□□□□□ -1.66
XRN1-202ENST00000392981 PRIMPOLQ96LW4 560 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 RNF40O75150 1001 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 NEFMP07197 916 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 FILIP1Q7Z7B0 1213 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 ADAMTS19Q8TE59 1207 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 MS4A4AQ96JQ5 239 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 EVI5O60447 810 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 PSMD2Q13200 908 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 OXER1Q8TDS5 423 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 MRFAP1L1Q96HT8 127 aa4.7□□□□□ -1.66
XRN1-202ENST00000392981 LMOD3Q0VAK6 560 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 LRRN4Q8WUT4 740 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 SPOCK3Q9BQ16 436 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 SOWAHDA6NJG2 315 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 SAFB2Q14151 953 aaKnown RBP eCLIP4.69□□□□□ -1.66
XRN1-202ENST00000392981 TCEAL9Q9UHQ7 104 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 MNX1P50219 401 aaPredicted RBP4.69□□□□□ -1.66
XRN1-202ENST00000392981 MTMR3Q13615 1198 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 SLFNL1Q499Z3 407 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 CCDC146Q8IYE0 955 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 PRR7Q8TB68 274 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 ZBTB3Q9H5J0 574 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 MKRN1Q9UHC7 482 aaKnown RBP4.69□□□□□ -1.66
XRN1-202ENST00000392981 PCDHB15Q9Y5E8 787 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 ZBBXA8MT70 800 aa4.69□□□□□ -1.66
XRN1-202ENST00000392981 C8orf37Q96NL8 207 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms