RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 C14orf37Q86TY3 774 aa9.65□□□□□ -0.86
UBBP1-201ENST00000392399 CADPS2Q86UW7 1296 aa9.65□□□□□ -0.86
UBBP1-201ENST00000392399 XRN1Q8IZH2 1706 aaKnown RBP9.65□□□□□ -0.87
UBBP1-201ENST00000392399 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.87
UBBP1-201ENST00000392399 ROBO2Q9HCK4 1378 aa9.64□□□□□ -0.87
UBBP1-201ENST00000392399 UBAP1LF5GYI3 381 aa9.64□□□□□ -0.87
UBBP1-201ENST00000392399 MYCNP04198 464 aaPredicted RBP9.64□□□□□ -0.87
UBBP1-201ENST00000392399 NBPF1Q3BBV0 1214 aa9.64□□□□□ -0.87
UBBP1-201ENST00000392399 RBM33Q96EV2 1170 aaKnown RBP9.64□□□□□ -0.87
UBBP1-201ENST00000392399 KIAA1210Q9ULL0 1709 aa9.64□□□□□ -0.87
UBBP1-201ENST00000392399 ADGRB1O14514 1584 aa9.63□□□□□ -0.87
UBBP1-201ENST00000392399 ATF3P18847 181 aa9.63□□□□□ -0.87
UBBP1-201ENST00000392399 NBPF8Q3BBV2 869 aa9.63□□□□□ -0.87
UBBP1-201ENST00000392399 POGKQ9P215 609 aa9.63□□□□□ -0.87
UBBP1-201ENST00000392399 TRAK1Q9UPV9 953 aa9.63□□□□□ -0.87
UBBP1-201ENST00000392399 ASXL1Q8IXJ9 1541 aa9.62□□□□□ -0.87
UBBP1-201ENST00000392399 WAPLQ7Z5K2 1190 aa9.62□□□□□ -0.87
UBBP1-201ENST00000392399 PRAM1Q96QH2 718 aa9.62□□□□□ -0.87
UBBP1-201ENST00000392399 DCCP43146 1447 aa9.62□□□□□ -0.87
UBBP1-201ENST00000392399 ROCK2O75116 1388 aaKnown RBP9.62□□□□□ -0.87
UBBP1-201ENST00000392399 GPRASP1Q5JY77 1395 aa9.62□□□□□ -0.87
UBBP1-201ENST00000392399 DLC1Q96QB1 1528 aa9.61□□□□□ -0.87
UBBP1-201ENST00000392399 SLAIN2Q9P270 581 aa9.61□□□□□ -0.87
UBBP1-201ENST00000392399 ADGRL3Q9HAR2 1447 aa9.61□□□□□ -0.87
UBBP1-201ENST00000392399 KNDC1Q76NI1 1749 aa9.6□□□□□ -0.87
UBBP1-201ENST00000392399 CARD11Q9BXL7 1154 aa9.6□□□□□ -0.87
UBBP1-201ENST00000392399 XIRP1Q702N8 1843 aaKnown RBP9.59□□□□□ -0.87
UBBP1-201ENST00000392399 SLC24A1O60721 1099 aa9.59□□□□□ -0.87
UBBP1-201ENST00000392399 RALGAPBQ86X10 1494 aa9.59□□□□□ -0.87
UBBP1-201ENST00000392399 TRPM1Q7Z4N2 1603 aa9.58□□□□□ -0.88
UBBP1-201ENST00000392399 EIF3AQ14152 1382 aaKnown RBP9.58□□□□□ -0.88
UBBP1-201ENST00000392399 PLEKHH1Q9ULM0 1364 aa9.58□□□□□ -0.88
UBBP1-201ENST00000392399 CENPJQ9HC77 1338 aaPredicted RBP9.57□□□□□ -0.88
UBBP1-201ENST00000392399 PIP4K2BP78356 416 aa9.57□□□□□ -0.88
UBBP1-201ENST00000392399 FOXD4L1Q9NU39 408 aa9.57□□□□□ -0.88
UBBP1-201ENST00000392399 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.56□□□□□ -0.88
UBBP1-201ENST00000392399 SAFB2Q14151 953 aaKnown RBP eCLIP9.56□□□□□ -0.88
UBBP1-201ENST00000392399 WASLO00401 505 aaPredicted RBP9.55□□□□□ -0.88
UBBP1-201ENST00000392399 ILDR1Q86SU0 546 aaPredicted RBP9.55□□□□□ -0.88
UBBP1-201ENST00000392399 MST1RQ04912 1400 aa9.55□□□□□ -0.88
UBBP1-201ENST00000392399 MINK1Q8N4C8 1332 aaPredicted RBP9.55□□□□□ -0.88
UBBP1-201ENST00000392399 CDC42BPGQ6DT37 1551 aa9.54□□□□□ -0.88
UBBP1-201ENST00000392399 NALCNQ8IZF0 1738 aa9.53□□□□□ -0.88
UBBP1-201ENST00000392399 C1orf167Q5SNV9 1468 aa9.53□□□□□ -0.88
UBBP1-201ENST00000392399 SBNO2Q9Y2G9 1366 aa9.53□□□□□ -0.88
UBBP1-201ENST00000392399 ABCB7O75027 752 aa9.53□□□□□ -0.88
UBBP1-201ENST00000392399 BRINP3Q76B58 766 aa9.53□□□□□ -0.88
UBBP1-201ENST00000392399 HIRIP3Q9BW71 556 aaPredicted RBP9.53□□□□□ -0.88
UBBP1-201ENST00000392399 CDK19Q9BWU1 502 aa9.53□□□□□ -0.88
UBBP1-201ENST00000392399 ARHGEF28Q8N1W1 1705 aaKnown RBP9.53□□□□□ -0.88
UBBP1-201ENST00000392399 EVC2Q86UK5 1308 aa9.53□□□□□ -0.88
UBBP1-201ENST00000392399 ADGRB2O60241 1585 aa9.52□□□□□ -0.89
UBBP1-201ENST00000392399 ESCO1Q5FWF5 840 aa9.52□□□□□ -0.89
UBBP1-201ENST00000392399 ANKARQ7Z5J8 1434 aa9.52□□□□□ -0.89
UBBP1-201ENST00000392399 PUS7Q96PZ0 661 aaKnown RBP9.52□□□□□ -0.89
UBBP1-201ENST00000392399 ST20-MTHFSA0A0A6YYL1 179 aa9.51□□□□□ -0.89
UBBP1-201ENST00000392399 ORAI2Q96SN7 254 aa9.51□□□□□ -0.89
UBBP1-201ENST00000392399 CCDC61Q9Y6R9 512 aa9.51□□□□□ -0.89
UBBP1-201ENST00000392399 USP47Q96K76 1375 aa9.5□□□□□ -0.89
UBBP1-201ENST00000392399 NUTM2FA1L443 756 aa9.5□□□□□ -0.89
UBBP1-201ENST00000392399 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBBP1-201ENST00000392399 SRPK2P78362 688 aaKnown RBP9.5□□□□□ -0.89
UBBP1-201ENST00000392399 NUDT16Q96DE0 195 aaKnown RBP9.5□□□□□ -0.89
UBBP1-201ENST00000392399 PHF8Q9UPP1 1060 aa9.5□□□□□ -0.89
UBBP1-201ENST00000392399 NPHP3Q7Z494 1330 aa9.5□□□□□ -0.89
UBBP1-201ENST00000392399 HSPA1LP34931 641 aa9.49□□□□□ -0.89
UBBP1-201ENST00000392399 ZEB1P37275 1124 aaPredicted RBP9.49□□□□□ -0.89
UBBP1-201ENST00000392399 CDCA8Q53HL2 280 aa9.49□□□□□ -0.89
UBBP1-201ENST00000392399 LRRC59Q96AG4 307 aaKnown RBP9.49□□□□□ -0.89
UBBP1-201ENST00000392399 TESK2Q96S53 571 aa9.49□□□□□ -0.89
UBBP1-201ENST00000392399 ROBO1Q9Y6N7 1651 aa9.48□□□□□ -0.89
UBBP1-201ENST00000392399 FMN2Q9NZ56 1722 aa9.48□□□□□ -0.89
UBBP1-201ENST00000392399 TULP4Q9NRJ4 1543 aa9.48□□□□□ -0.89
UBBP1-201ENST00000392399 PLEKHG3A1L390 1219 aa9.48□□□□□ -0.89
UBBP1-201ENST00000392399 FOXO3O43524 673 aa9.48□□□□□ -0.89
UBBP1-201ENST00000392399 TMF1P82094 1093 aa9.48□□□□□ -0.89
UBBP1-201ENST00000392399 PRR36Q9H6K5 1346 aa9.48□□□□□ -0.89
UBBP1-201ENST00000392399 PSME1Q06323 249 aa9.47□□□□□ -0.89
UBBP1-201ENST00000392399 CABP2Q9NPB3 220 aa9.47□□□□□ -0.89
UBBP1-201ENST00000392399 QRICH2Q9H0J4 1663 aa9.47□□□□□ -0.89
UBBP1-201ENST00000392399 SOS2Q07890 1332 aaPredicted RBP9.47□□□□□ -0.89
UBBP1-201ENST00000392399 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
UBBP1-201ENST00000392399 AHDC1Q5TGY3 1603 aaPredicted RBP9.46□□□□□ -0.89
UBBP1-201ENST00000392399 KRT28Q7Z3Y7 464 aa9.46□□□□□ -0.9
UBBP1-201ENST00000392399 NGDNQ8NEJ9 315 aaKnown RBP9.46□□□□□ -0.9
UBBP1-201ENST00000392399 PMFBP1Q8TBY8 1022 aa9.46□□□□□ -0.9
UBBP1-201ENST00000392399 ZNF692Q9BU19 519 aaPredicted RBP9.46□□□□□ -0.9
UBBP1-201ENST00000392399 HSPA5P11021 654 aaKnown RBP9.45□□□□□ -0.9
UBBP1-201ENST00000392399 CABP1Q9NZU7 370 aa9.45□□□□□ -0.9
UBBP1-201ENST00000392399 ATP7BP35670 1465 aa9.45□□□□□ -0.9
UBBP1-201ENST00000392399 DDX17Q92841 729 aaKnown RBP9.44□□□□□ -0.9
UBBP1-201ENST00000392399 POLR3AO14802 1390 aaPredicted RBP9.44□□□□□ -0.9
UBBP1-201ENST00000392399 BRD4O60885 1362 aaPredicted RBP9.44□□□□□ -0.9
UBBP1-201ENST00000392399 JCADQ9P266 1359 aa9.44□□□□□ -0.9
UBBP1-201ENST00000392399 KIF1AQ12756 1690 aa9.44□□□□□ -0.9
UBBP1-201ENST00000392399 NHSL1Q5SYE7 1610 aa9.43□□□□□ -0.9
UBBP1-201ENST00000392399 USP32Q8NFA0 1604 aa9.43□□□□□ -0.9
UBBP1-201ENST00000392399 PPIP5K1Q6PFW1 1433 aa9.43□□□□□ -0.9
UBBP1-201ENST00000392399 NINLQ9Y2I6 1382 aa9.43□□□□□ -0.9
UBBP1-201ENST00000392399 ACEP12821 1306 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms