RNA–Protein interactions for RNA: ENST00000392393.7

VNN3-203, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-203ENST00000392393 NOVA2Q9UNW9 492 aaKnown RBP9.98□□□□□ -0.81
VNN3-203ENST00000392393 TRIM35Q9UPQ4 493 aa9.98□□□□□ -0.81
VNN3-203ENST00000392393 PRPF38BQ5VTL8 546 aaKnown RBP9.97□□□□□ -0.81
VNN3-203ENST00000392393 BMP2KQ9NSY1 1161 aaPredicted RBP9.97□□□□□ -0.81
VNN3-203ENST00000392393 SOX11P35716 441 aa9.96□□□□□ -0.82
VNN3-203ENST00000392393 SCNN1AP37088 669 aa9.96□□□□□ -0.82
VNN3-203ENST00000392393 FXR2P51116 673 aaKnown RBP eCLIP9.96□□□□□ -0.82
VNN3-203ENST00000392393 SEMA3FQ13275 785 aa9.96□□□□□ -0.82
VNN3-203ENST00000392393 GIMAP6Q6P9H5 292 aa9.96□□□□□ -0.82
VNN3-203ENST00000392393 TYW1BQ6NUM6 668 aa9.95□□□□□ -0.82
VNN3-203ENST00000392393 PIK3CDO00329 1044 aa9.93□□□□□ -0.82
VNN3-203ENST00000392393 CD44P16070 742 aaKnown RBP9.93□□□□□ -0.82
VNN3-203ENST00000392393 FBXO33Q7Z6M2 555 aa9.93□□□□□ -0.82
VNN3-203ENST00000392393 ZBTB3Q9H5J0 574 aa9.93□□□□□ -0.82
VNN3-203ENST00000392393 RCCD1A6NED2 376 aa9.93□□□□□ -0.82
VNN3-203ENST00000392393 DDX11L8A8MPP1 907 aa9.93□□□□□ -0.82
VNN3-203ENST00000392393 FAM69CQ0P6D2 419 aa9.93□□□□□ -0.82
VNN3-203ENST00000392393 ANKRD13AQ8IZ07 590 aa9.93□□□□□ -0.82
VNN3-203ENST00000392393 RBM46Q8TBY0 533 aaKnown RBP9.93□□□□□ -0.82
VNN3-203ENST00000392393 BIN2Q9UBW5 565 aaPredicted RBP9.93□□□□□ -0.82
VNN3-203ENST00000392393 ZNF326Q5BKZ1 582 aaKnown RBP9.92□□□□□ -0.82
VNN3-203ENST00000392393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.91□□□□□ -0.82
VNN3-203ENST00000392393 ANKRD62A6NC57 917 aa9.91□□□□□ -0.82
VNN3-203ENST00000392393 CERKQ8TCT0 537 aa9.9□□□□□ -0.82
VNN3-203ENST00000392393 RBM27Q9P2N5 1060 aaKnown RBP9.9□□□□□ -0.82
VNN3-203ENST00000392393 PCDHGC3Q9UN70 934 aa9.9□□□□□ -0.82
VNN3-203ENST00000392393 SF3A1Q15459 793 aaKnown RBP9.89□□□□□ -0.83
VNN3-203ENST00000392393 C6orf132Q5T0Z8 1188 aa9.89□□□□□ -0.83
VNN3-203ENST00000392393 ZNF662Q6ZS27 426 aa9.89□□□□□ -0.83
VNN3-203ENST00000392393 HIRIP3Q9BW71 556 aaPredicted RBP9.89□□□□□ -0.83
VNN3-203ENST00000392393 ZC3H4Q9UPT8 1303 aaKnown RBP9.89□□□□□ -0.83
VNN3-203ENST00000392393 NCLP19338 710 aaKnown RBP9.89□□□□□ -0.83
VNN3-203ENST00000392393 IRX5P78411 483 aaPredicted RBP9.89□□□□□ -0.83
VNN3-203ENST00000392393 CRTC2Q53ET0 693 aaPredicted RBP9.89□□□□□ -0.83
VNN3-203ENST00000392393 FAM198AQ9UFP1 575 aa9.88□□□□□ -0.83
VNN3-203ENST00000392393 USP17L3A6NCW0 530 aa9.87□□□□□ -0.83
VNN3-203ENST00000392393 USP17L4A6NCW7 530 aa9.87□□□□□ -0.83
VNN3-203ENST00000392393 BRD2P25440 801 aaKnown RBP9.87□□□□□ -0.83
VNN3-203ENST00000392393 GUCA2AQ02747 115 aa9.87□□□□□ -0.83
VNN3-203ENST00000392393 TSNAXIP1Q2TAA8 658 aa9.87□□□□□ -0.83
VNN3-203ENST00000392393 USP17L2Q6R6M4 530 aa9.87□□□□□ -0.83
VNN3-203ENST00000392393 DPH6Q7L8W6 267 aa9.87□□□□□ -0.83
VNN3-203ENST00000392393 USP17L1Q7RTZ2 530 aa9.87□□□□□ -0.83
VNN3-203ENST00000392393 SULF1Q8IWU6 871 aa9.87□□□□□ -0.83
VNN3-203ENST00000392393 CLP1Q92989 425 aaKnown RBP9.87□□□□□ -0.83
VNN3-203ENST00000392393 USP17L15C9J2P7 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 USP17L10C9JJH3 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 USP17L13C9JLJ4 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 USP17L12C9JPN9 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 USP17L11C9JVI0 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 USP17L21D6R901 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 USP17L18D6R9N7 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 USP17L22D6RA61 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 USP17L17D6RBQ6 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 USP17L19D6RCP7 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 USP17L20D6RJB6 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 USP17L24Q0WX57 530 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 HLA-CQ95604 372 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 EYA1Q99502 592 aa9.86□□□□□ -0.83
VNN3-203ENST00000392393 G3V3G9 751 aa9.85□□□□□ -0.83
VNN3-203ENST00000392393 FDX1P10109 184 aa9.85□□□□□ -0.83
VNN3-203ENST00000392393 ATP2B4P23634 1241 aa9.85□□□□□ -0.83
VNN3-203ENST00000392393 TSC1Q92574 1164 aa9.85□□□□□ -0.83
VNN3-203ENST00000392393 FAM196BA6NMK8 535 aa9.85□□□□□ -0.83
VNN3-203ENST00000392393 CFAP99D6REC4 459 aa9.85□□□□□ -0.83
VNN3-203ENST00000392393 KDM4AO75164 1064 aa9.85□□□□□ -0.83
VNN3-203ENST00000392393 PRSS12P56730 875 aa9.85□□□□□ -0.83
VNN3-203ENST00000392393 NR6A1Q15406 480 aa9.85□□□□□ -0.83
VNN3-203ENST00000392393 C3orf80F5H4A9 247 aa9.84□□□□□ -0.83
VNN3-203ENST00000392393 HOXA2O43364 376 aa9.84□□□□□ -0.83
VNN3-203ENST00000392393 ERCC5P28715 1186 aaPredicted RBP9.84□□□□□ -0.83
VNN3-203ENST00000392393 DEPDC4Q8N2C3 294 aa9.84□□□□□ -0.83
VNN3-203ENST00000392393 CDCA7LQ96GN5 454 aa9.84□□□□□ -0.83
VNN3-203ENST00000392393 C9orf131Q5VYM1 1079 aa9.83□□□□□ -0.84
VNN3-203ENST00000392393 CERS3Q8IU89 383 aa9.83□□□□□ -0.84
VNN3-203ENST00000392393 HELBQ8NG08 1087 aaPredicted RBP9.83□□□□□ -0.84
VNN3-203ENST00000392393 JPH4Q96JJ6 628 aa9.83□□□□□ -0.84
VNN3-203ENST00000392393 EIF4G2P78344 907 aaKnown RBP eCLIP9.82□□□□□ -0.84
VNN3-203ENST00000392393 PTK7Q13308 1070 aa9.82□□□□□ -0.84
VNN3-203ENST00000392393 OCEL1Q9H607 264 aa9.82□□□□□ -0.84
VNN3-203ENST00000392393 CCDC180Q9P1Z9 1646 aa9.82□□□□□ -0.84
VNN3-203ENST00000392393 USP17L5A8MUK1 530 aa9.82□□□□□ -0.84
VNN3-203ENST00000392393 SLC34A2O95436 690 aa9.82□□□□□ -0.84
VNN3-203ENST00000392393 HDLBPQ00341 1268 aaKnown RBP9.82□□□□□ -0.84
VNN3-203ENST00000392393 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
VNN3-203ENST00000392393 FAM174AQ8TBP5 190 aa9.81□□□□□ -0.84
VNN3-203ENST00000392393 BACH2Q9BYV9 841 aa9.81□□□□□ -0.84
VNN3-203ENST00000392393 PPP1R3GB7ZBB8 358 aa9.8□□□□□ -0.84
VNN3-203ENST00000392393 SKIP12755 728 aa9.8□□□□□ -0.84
VNN3-203ENST00000392393 ARID4BQ4LE39 1312 aaPredicted RBP9.79□□□□□ -0.84
VNN3-203ENST00000392393 FOSBP53539 338 aa9.79□□□□□ -0.84
VNN3-203ENST00000392393 MTMR2Q13614 643 aa9.79□□□□□ -0.84
VNN3-203ENST00000392393 SLF2Q8IX21 1173 aa9.79□□□□□ -0.84
VNN3-203ENST00000392393 NFATC2IPQ8NCF5 419 aa9.79□□□□□ -0.84
VNN3-203ENST00000392393 FAM200AQ8TCP9 573 aa9.79□□□□□ -0.84
VNN3-203ENST00000392393 MKRN1Q9UHC7 482 aaKnown RBP9.79□□□□□ -0.84
VNN3-203ENST00000392393 ZNF211Q13398 564 aaPredicted RBP9.78□□□□□ -0.84
VNN3-203ENST00000392393 LDLRAD1Q5T700 205 aa9.78□□□□□ -0.84
VNN3-203ENST00000392393 DNAJC2Q99543 621 aaKnown RBP9.78□□□□□ -0.84
VNN3-203ENST00000392393 RAD51AP2Q09MP3 1159 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms