RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 TSPAN18Q96SJ8 248 aa4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 GABBR1Q9UBS5 961 aa4.42□□□□□ -1.7
TRAJ17-201ENST00000390520 CFAP69A5D8W1 941 aa4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 POM121CA8CG34 1229 aa4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 HOXA2O43364 376 aa4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 ZNF500O60304 480 aaPredicted RBP4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 WDHD1O75717 1129 aaPredicted RBP4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 RHBDL3P58872 404 aa4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 B4GALNT3Q6L9W6 998 aa4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 CCDC146Q8IYE0 955 aa4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 HELBQ8NG08 1087 aaPredicted RBP4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 ZCRB1Q8TBF4 217 aaKnown RBP4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 IRF2BPLQ9H1B7 796 aa4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 ARHGEF10LQ9HCE6 1279 aa4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 SNRKQ9NRH2 765 aa4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 FBXO9Q9UK97 447 aaPredicted RBP4.41□□□□□ -1.7
TRAJ17-201ENST00000390520 RFX1P22670 979 aa4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 ERCC5P28715 1186 aaPredicted RBP4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 NUBP1P53384 320 aa4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 BIRC2Q13490 618 aa4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 SETDB1Q15047 1291 aa4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 TCEAL1Q15170 157 aa4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 CSPP1Q1MSJ5 1256 aa4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 NBPF20Q3BBV1 942 aa4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 PLEKHG6Q3KR16 790 aa4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 CCDC144BQ3MJ40 725 aa4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 AXDND1Q5T1B0 1012 aaPredicted RBP4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 PCGF5Q86SE9 256 aa4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 NRBP1Q9UHY1 535 aa4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 U3KPZ7 1027 aaPredicted RBP4.4□□□□□ -1.71
TRAJ17-201ENST00000390520 ATG7O95352 703 aa4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 GTF2E1P29083 439 aaPredicted RBP4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 TBX4P57082 545 aa4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 EVA1CP58658 441 aa4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 CDCA8Q53HL2 280 aa4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 GIGYF2Q6Y7W6 1299 aaKnown RBP4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 PIK3R5Q8WYR1 880 aa4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 ARMC5Q96C12 935 aa4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 RPS6KC1Q96S38 1066 aa4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 TANGO6Q9C0B7 1094 aa4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 GDPD2Q9HCC8 539 aa4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 RPGRIP1LQ68CZ1 1315 aa4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 IGF1RP08069 1367 aa4.39□□□□□ -1.71
TRAJ17-201ENST00000390520 HSP90AA1P07900 732 aaKnown RBP4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 POU5F1Q01860 360 aaKnown RBP4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 CAMK2BQ13554 666 aa4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 TTLL12Q14166 644 aaPredicted RBP4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 MFSD10Q14728 455 aa4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 CEP120Q8N960 986 aa4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 PROCA1Q8NCQ7 364 aaPredicted RBP4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 SNRNP27Q8WVK2 155 aaKnown RBP4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 YTHDC1Q96MU7 727 aaKnown RBP4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 EPAS1Q99814 870 aa4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 WWC3Q9ULE0 1092 aa4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 FRMD4BQ9Y2L6 1034 aa4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 SH3BP1Q9Y3L3 701 aa4.38□□□□□ -1.71
TRAJ17-201ENST00000390520 CCDC189A1A4V9 331 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 GOLIM4O00461 696 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 STK10O94804 968 aaKnown RBP4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 HSD3B2P26439 372 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 ZKSCAN2Q63HK3 967 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 ICE2Q659A1 982 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 FBXO33Q7Z6M2 555 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 RPUSD2Q8IZ73 545 aaKnown RBP4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 SLC43A3Q8NBI5 491 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 PPP1R12CQ9BZL4 782 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 PIF1Q9H611 641 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 SPC25Q9HBM1 224 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 PCDH12Q9NPG4 1184 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 GEMIN8Q9NWZ8 242 aaKnown RBP4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 FEZ2Q9UHY8 353 aaPredicted RBP4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 TPX2Q9ULW0 747 aaKnown RBP4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 COL4A3BPQ9Y5P4 624 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 NCKAP5LQ9HCH0 1330 aa4.37□□□□□ -1.71
TRAJ17-201ENST00000390520 ANKRD33BA6NCL7 494 aa4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 SOCS7O14512 581 aa4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 POLD1P28340 1107 aa4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 RNF187Q5TA31 235 aaPredicted RBP4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 DCAF8Q5TAQ9 597 aa4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 ZNF746Q6NUN9 644 aaPredicted RBP4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 GET4Q7L5D6 327 aaPredicted RBP4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 ZNF467Q7Z7K2 595 aaPredicted RBP4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 PPARGC1BQ86YN6 1023 aaKnown RBP4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 TMC2Q8TDI7 906 aa4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 ADAMTS19Q8TE59 1207 aa4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 STAG1Q8WVM7 1258 aa4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 DHX38Q92620 1227 aaKnown RBP4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 TRIM34Q9BYJ4 488 aa4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 PRKAG2Q9UGJ0 569 aa4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 PRR12Q9ULL5 1215 aa4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 SCINQ9Y6U3 715 aa4.36□□□□□ -1.71
TRAJ17-201ENST00000390520 GOLGA6CA6NDK9 693 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 GOLGA6BA6NDN3 693 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 SOWAHDA6NJG2 315 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 SOX12O15370 315 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 PRC1O43663 620 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 RGS20O76081 388 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 VIL1P09327 827 aaKnown RBP4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 GOLGA6DP0CG33 693 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms