RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 BRICD5Q6PL45 260 aa5.54□□□□□ -1.52
SNORA40-201ENST00000388090 TRIM46Q7Z4K8 759 aa5.54□□□□□ -1.52
SNORA40-201ENST00000388090 SALL2Q9Y467 1007 aaPredicted RBP5.54□□□□□ -1.52
SNORA40-201ENST00000388090 PXYLP1Q8TE99 480 aa5.53□□□□□ -1.52
SNORA40-201ENST00000388090 BMP1P13497 986 aa5.52□□□□□ -1.53
SNORA40-201ENST00000388090 ATP6V1AP38606 617 aa5.52□□□□□ -1.53
SNORA40-201ENST00000388090 RSPH4AQ5TD94 716 aa5.52□□□□□ -1.53
SNORA40-201ENST00000388090 REPIN1Q9BWE0 567 aaKnown RBP5.52□□□□□ -1.53
SNORA40-201ENST00000388090 RNF19BQ6ZMZ0 732 aa5.51□□□□□ -1.53
SNORA40-201ENST00000388090 WDR70Q9NW82 654 aa5.51□□□□□ -1.53
SNORA40-201ENST00000388090 FECHP22830 423 aa5.5□□□□□ -1.53
SNORA40-201ENST00000388090 SKOR1P84550 965 aa5.5□□□□□ -1.53
SNORA40-201ENST00000388090 RC3H1Q5TC82 1133 aaKnown RBP5.5□□□□□ -1.53
SNORA40-201ENST00000388090 OATP04181 439 aa5.49□□□□□ -1.53
SNORA40-201ENST00000388090 VSIG8P0DPA2 414 aa5.49□□□□□ -1.53
SNORA40-201ENST00000388090 MMP16P51512 607 aa5.49□□□□□ -1.53
SNORA40-201ENST00000388090 METTL3Q86U44 580 aaKnown RBP5.48□□□□□ -1.53
SNORA40-201ENST00000388090 TMEM151AQ8N4L1 468 aa5.48□□□□□ -1.53
SNORA40-201ENST00000388090 ALDH1A1P00352 501 aa5.47□□□□□ -1.53
SNORA40-201ENST00000388090 RDH13Q8NBN7 331 aa5.47□□□□□ -1.53
SNORA40-201ENST00000388090 NUTM2FA1L443 756 aa5.46□□□□□ -1.54
SNORA40-201ENST00000388090 CAPN5O15484 640 aaPredicted RBP5.46□□□□□ -1.54
SNORA40-201ENST00000388090 GDF11O95390 407 aa5.46□□□□□ -1.54
SNORA40-201ENST00000388090 GCGRP47871 477 aa5.46□□□□□ -1.54
SNORA40-201ENST00000388090 WNT7BP56706 349 aa5.46□□□□□ -1.54
SNORA40-201ENST00000388090 RASSF7Q02833 373 aa5.46□□□□□ -1.54
SNORA40-201ENST00000388090 BBXQ8WY36 941 aaPredicted RBP5.46□□□□□ -1.54
SNORA40-201ENST00000388090 ZFP42Q96MM3 310 aa5.46□□□□□ -1.54
SNORA40-201ENST00000388090 DAXXQ9UER7 740 aaPredicted RBP5.46□□□□□ -1.54
SNORA40-201ENST00000388090 SIAH2O43255 324 aa5.45□□□□□ -1.54
SNORA40-201ENST00000388090 DXOO77932 396 aaKnown RBP5.45□□□□□ -1.54
SNORA40-201ENST00000388090 FCHSD2O94868 740 aa5.45□□□□□ -1.54
SNORA40-201ENST00000388090 XP32Q5T750 250 aa5.44□□□□□ -1.54
SNORA40-201ENST00000388090 DDX11L8A8MPP1 907 aa5.43□□□□□ -1.54
SNORA40-201ENST00000388090 SOBPA7XYQ1 873 aa5.41□□□□□ -1.54
SNORA40-201ENST00000388090 SPRYD3Q8NCJ5 442 aa5.41□□□□□ -1.54
SNORA40-201ENST00000388090 NLRP7Q8WX94 980 aa5.41□□□□□ -1.54
SNORA40-201ENST00000388090 ARHGEF1Q92888 912 aaKnown RBP5.41□□□□□ -1.54
SNORA40-201ENST00000388090 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
SNORA40-201ENST00000388090 Q3C1V9 767 aa5.4□□□□□ -1.54
SNORA40-201ENST00000388090 USB1Q9BQ65 265 aaKnown RBP5.4□□□□□ -1.54
SNORA40-201ENST00000388090 WASF2Q9Y6W5 498 aa5.4□□□□□ -1.54
SNORA40-201ENST00000388090 CCDC24Q8N4L8 307 aa5.39□□□□□ -1.55
SNORA40-201ENST00000388090 ADAMTS8Q9UP79 889 aa5.39□□□□□ -1.55
SNORA40-201ENST00000388090 RNF225M0QZC1 329 aaPredicted RBP5.38□□□□□ -1.55
SNORA40-201ENST00000388090 HIC1Q14526 733 aa5.38□□□□□ -1.55
SNORA40-201ENST00000388090 GRIPAP1Q4V328 841 aa5.38□□□□□ -1.55
SNORA40-201ENST00000388090 GPAT2Q6NUI2 795 aa5.38□□□□□ -1.55
SNORA40-201ENST00000388090 MRPL14Q6P1L8 145 aaKnown RBP5.38□□□□□ -1.55
SNORA40-201ENST00000388090 SULF1Q8IWU6 871 aa5.38□□□□□ -1.55
SNORA40-201ENST00000388090 EHBP1Q8NDI1 1231 aa5.38□□□□□ -1.55
SNORA40-201ENST00000388090 KRT76Q01546 638 aa5.37□□□□□ -1.55
SNORA40-201ENST00000388090 PHOX2BQ99453 314 aa5.37□□□□□ -1.55
SNORA40-201ENST00000388090 IGHA1P01876 353 aa5.36□□□□□ -1.55
SNORA40-201ENST00000388090 PTCRAQ6ISU1 281 aaPredicted RBP5.36□□□□□ -1.55
SNORA40-201ENST00000388090 PURBQ96QR8 312 aaKnown RBP5.36□□□□□ -1.55
SNORA40-201ENST00000388090 DNMT3AQ9Y6K1 912 aaPredicted RBP5.36□□□□□ -1.55
SNORA40-201ENST00000388090 PPFIA3O75145 1194 aa5.35□□□□□ -1.55
SNORA40-201ENST00000388090 KCNV2Q8TDN2 545 aa5.35□□□□□ -1.55
SNORA40-201ENST00000388090 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
SNORA40-201ENST00000388090 SH3BP2P78314 561 aa5.34□□□□□ -1.55
SNORA40-201ENST00000388090 SCARF1Q14162 830 aa5.34□□□□□ -1.55
SNORA40-201ENST00000388090 TIMP2P16035 220 aa5.33□□□□□ -1.56
SNORA40-201ENST00000388090 GPR161Q8N6U8 529 aaKnown RBP5.33□□□□□ -1.56
SNORA40-201ENST00000388090 HLA-CQ95604 372 aa5.33□□□□□ -1.56
SNORA40-201ENST00000388090 KLF16Q9BXK1 252 aaPredicted RBP5.33□□□□□ -1.56
SNORA40-201ENST00000388090 TLL2Q9Y6L7 1015 aa5.33□□□□□ -1.56
SNORA40-201ENST00000388090 GNPATO15228 680 aa5.32□□□□□ -1.56
SNORA40-201ENST00000388090 JUNDP17535 347 aa5.32□□□□□ -1.56
SNORA40-201ENST00000388090 NNTQ13423 1086 aa5.32□□□□□ -1.56
SNORA40-201ENST00000388090 ZNF385CQ66K41 422 aaPredicted RBP5.32□□□□□ -1.56
SNORA40-201ENST00000388090 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
SNORA40-201ENST00000388090 GPR37O15354 613 aa5.31□□□□□ -1.56
SNORA40-201ENST00000388090 CD46P15529 392 aa5.31□□□□□ -1.56
SNORA40-201ENST00000388090 IRS1P35568 1242 aa5.31□□□□□ -1.56
SNORA40-201ENST00000388090 FOXK2Q01167 660 aa5.31□□□□□ -1.56
SNORA40-201ENST00000388090 MPNDQ8N594 471 aa5.31□□□□□ -1.56
SNORA40-201ENST00000388090 CNTNAP3BQ96NU0 1288 aa5.31□□□□□ -1.56
SNORA40-201ENST00000388090 NUDT12Q9BQG2 462 aa5.31□□□□□ -1.56
SNORA40-201ENST00000388090 CNTNAP3Q9BZ76 1288 aa5.31□□□□□ -1.56
SNORA40-201ENST00000388090 MAN1A2O60476 641 aa5.3□□□□□ -1.56
SNORA40-201ENST00000388090 ADAM23O75077 832 aa5.3□□□□□ -1.56
SNORA40-201ENST00000388090 KDM4AO75164 1064 aa5.3□□□□□ -1.56
SNORA40-201ENST00000388090 ADH1CP00326 375 aa5.3□□□□□ -1.56
SNORA40-201ENST00000388090 WDR4P57081 412 aaKnown RBP5.3□□□□□ -1.56
SNORA40-201ENST00000388090 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.3□□□□□ -1.56
SNORA40-201ENST00000388090 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
SNORA40-201ENST00000388090 ARHGEF15O94989 841 aa5.29□□□□□ -1.56
SNORA40-201ENST00000388090 SEMA3EO15041 775 aa5.28□□□□□ -1.56
SNORA40-201ENST00000388090 KANK3Q6NY19 840 aa5.28□□□□□ -1.56
SNORA40-201ENST00000388090 PAXIP1Q6ZW49 1069 aaPredicted RBP5.28□□□□□ -1.56
SNORA40-201ENST00000388090 WHAMMQ8TF30 809 aa5.28□□□□□ -1.56
SNORA40-201ENST00000388090 SYMPKQ92797 1274 aaKnown RBP5.28□□□□□ -1.56
SNORA40-201ENST00000388090 CFAP44Q96MT7 982 aa5.28□□□□□ -1.56
SNORA40-201ENST00000388090 PLEKHG3A1L390 1219 aa5.27□□□□□ -1.57
SNORA40-201ENST00000388090 HOXA2O43364 376 aa5.27□□□□□ -1.57
SNORA40-201ENST00000388090 USP46P62068 366 aa5.27□□□□□ -1.57
SNORA40-201ENST00000388090 RNFT1Q5M7Z0 435 aa5.27□□□□□ -1.57
SNORA40-201ENST00000388090 RBM26Q5T8P6 1007 aaKnown RBP5.27□□□□□ -1.57
SNORA40-201ENST00000388090 SVOPQ8N4V2 548 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms