RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 RAD21O60216 631 aa8.85□□□□□ -0.99
RNU6-549P-201ENST00000384433 HMX1Q9NP08 348 aaPredicted RBP8.85□□□□□ -0.99
RNU6-549P-201ENST00000384433 TBC1D2BQ9UPU7 963 aa8.85□□□□□ -0.99
RNU6-549P-201ENST00000384433 ATP6V1AP38606 617 aa8.84□□□□□ -0.99
RNU6-549P-201ENST00000384433 MTMR2Q13614 643 aa8.84□□□□□ -0.99
RNU6-549P-201ENST00000384433 CCDC82Q8N4S0 544 aa8.84□□□□□ -0.99
RNU6-549P-201ENST00000384433 GJD4Q96KN9 370 aaPredicted RBP8.84□□□□□ -0.99
RNU6-549P-201ENST00000384433 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.84□□□□□ -0.99
RNU6-549P-201ENST00000384433 C6orf229H3BNL8 230 aa8.83□□□□□ -1
RNU6-549P-201ENST00000384433 BCAMP50895 628 aa8.83□□□□□ -1
RNU6-549P-201ENST00000384433 MORN1Q5T089 497 aa8.83□□□□□ -1
RNU6-549P-201ENST00000384433 LRRN4Q8WUT4 740 aa8.83□□□□□ -1
RNU6-549P-201ENST00000384433 LRCH3Q96II8 777 aa8.83□□□□□ -1
RNU6-549P-201ENST00000384433 SLC27A5Q9Y2P5 690 aa8.83□□□□□ -1
RNU6-549P-201ENST00000384433 ABL2P42684 1182 aa8.82□□□□□ -1
RNU6-549P-201ENST00000384433 SLC4A3P48751 1232 aa8.82□□□□□ -1
RNU6-549P-201ENST00000384433 TSC1Q92574 1164 aa8.82□□□□□ -1
RNU6-549P-201ENST00000384433 ACTN4O43707 911 aaKnown RBP8.81□□□□□ -1
RNU6-549P-201ENST00000384433 EPS8L1Q8TE68 723 aa8.81□□□□□ -1
RNU6-549P-201ENST00000384433 TRIM34Q9BYJ4 488 aa8.81□□□□□ -1
RNU6-549P-201ENST00000384433 POM121CA8CG34 1229 aa8.8□□□□□ -1
RNU6-549P-201ENST00000384433 GPR37L1O60883 481 aa8.8□□□□□ -1
RNU6-549P-201ENST00000384433 APLP1P51693 650 aa8.8□□□□□ -1
RNU6-549P-201ENST00000384433 KMT5BQ4FZB7 885 aa8.8□□□□□ -1
RNU6-549P-201ENST00000384433 ZNF330Q9Y3S2 320 aaPredicted RBP8.8□□□□□ -1
RNU6-549P-201ENST00000384433 SOWAHBA6NEL2 793 aa8.79□□□□□ -1
RNU6-549P-201ENST00000384433 PER1O15534 1290 aaPredicted RBP8.79□□□□□ -1
RNU6-549P-201ENST00000384433 GRIPAP1Q4V328 841 aa8.79□□□□□ -1
RNU6-549P-201ENST00000384433 BLOC1S3Q6QNY0 202 aa8.79□□□□□ -1
RNU6-549P-201ENST00000384433 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
RNU6-549P-201ENST00000384433 PRR7Q8TB68 274 aa8.79□□□□□ -1
RNU6-549P-201ENST00000384433 HPS5Q9UPZ3 1129 aa8.79□□□□□ -1
RNU6-549P-201ENST00000384433 IRF5Q13568 498 aa8.78□□□□□ -1
RNU6-549P-201ENST00000384433 ANKK1Q8NFD2 765 aa8.78□□□□□ -1
RNU6-549P-201ENST00000384433 KRTAP3-3Q9BYR6 98 aa8.78□□□□□ -1
RNU6-549P-201ENST00000384433 KRTAP3-2Q9BYR7 98 aa8.78□□□□□ -1
RNU6-549P-201ENST00000384433 GOLGA8CPA6NN73 597 aa8.77□□□□□ -1.01
RNU6-549P-201ENST00000384433 PPP4CP60510 307 aa8.77□□□□□ -1.01
RNU6-549P-201ENST00000384433 PLSCR2Q9NRY7 297 aa8.77□□□□□ -1.01
RNU6-549P-201ENST00000384433 SOCS7O14512 581 aa8.76□□□□□ -1.01
RNU6-549P-201ENST00000384433 WNT2BQ93097 391 aa8.76□□□□□ -1.01
RNU6-549P-201ENST00000384433 HELBQ8NG08 1087 aaPredicted RBP8.75□□□□□ -1.01
RNU6-549P-201ENST00000384433 STAC3Q96MF2 364 aa8.75□□□□□ -1.01
RNU6-549P-201ENST00000384433 NR6A1Q15406 480 aa8.74□□□□□ -1.01
RNU6-549P-201ENST00000384433 RETREG3Q86VR2 466 aa8.74□□□□□ -1.01
RNU6-549P-201ENST00000384433 WBP1LQ9NX94 342 aa8.74□□□□□ -1.01
RNU6-549P-201ENST00000384433 TSR3Q9UJK0 312 aaKnown RBP8.74□□□□□ -1.01
RNU6-549P-201ENST00000384433 BRICD5Q6PL45 260 aa8.73□□□□□ -1.01
RNU6-549P-201ENST00000384433 SCUBE3Q8IX30 993 aa8.73□□□□□ -1.01
RNU6-549P-201ENST00000384433 NDUFB9Q9Y6M9 179 aa8.73□□□□□ -1.01
RNU6-549P-201ENST00000384433 ADAMTS19Q8TE59 1207 aa8.72□□□□□ -1.01
RNU6-549P-201ENST00000384433 THAP11Q96EK4 314 aa8.72□□□□□ -1.01
RNU6-549P-201ENST00000384433 PCDHB3Q9Y5E6 796 aa8.71□□□□□ -1.02
RNU6-549P-201ENST00000384433 VAC14Q08AM6 782 aa8.7□□□□□ -1.02
RNU6-549P-201ENST00000384433 Q3C1V9 767 aa8.7□□□□□ -1.02
RNU6-549P-201ENST00000384433 USB1Q9BQ65 265 aaKnown RBP8.7□□□□□ -1.02
RNU6-549P-201ENST00000384433 POTEMA6NI47 508 aa8.69□□□□□ -1.02
RNU6-549P-201ENST00000384433 LYPD8Q6UX82 237 aa8.69□□□□□ -1.02
RNU6-549P-201ENST00000384433 NECTIN2Q92692 538 aa8.69□□□□□ -1.02
RNU6-549P-201ENST00000384433 GLMNQ92990 594 aa8.69□□□□□ -1.02
RNU6-549P-201ENST00000384433 PRM3Q9NNZ6 103 aa8.69□□□□□ -1.02
RNU6-549P-201ENST00000384433 COPS2P61201 443 aa8.68□□□□□ -1.02
RNU6-549P-201ENST00000384433 THSD4Q6ZMP0 1018 aa8.68□□□□□ -1.02
RNU6-549P-201ENST00000384433 KCTD12Q96CX2 325 aaKnown RBP8.68□□□□□ -1.02
RNU6-549P-201ENST00000384433 CCDC97Q96F63 343 aaPredicted RBP8.68□□□□□ -1.02
RNU6-549P-201ENST00000384433 PRR14Q9BWN1 585 aa8.68□□□□□ -1.02
RNU6-549P-201ENST00000384433 SERPINA10Q9UK55 444 aa8.68□□□□□ -1.02
RNU6-549P-201ENST00000384433 HDGFL1Q5TGJ6 251 aa8.67□□□□□ -1.02
RNU6-549P-201ENST00000384433 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
RNU6-549P-201ENST00000384433 CALR3Q96L12 384 aaKnown RBP8.67□□□□□ -1.02
RNU6-549P-201ENST00000384433 NR1I2O75469 434 aa8.66□□□□□ -1.02
RNU6-549P-201ENST00000384433 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
RNU6-549P-201ENST00000384433 DESI1Q6ICB0 168 aa8.66□□□□□ -1.02
RNU6-549P-201ENST00000384433 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
RNU6-549P-201ENST00000384433 WWC1Q8IX03 1113 aa8.65□□□□□ -1.02
RNU6-549P-201ENST00000384433 PRDM9Q9NQV7 894 aa8.65□□□□□ -1.02
RNU6-549P-201ENST00000384433 MAP10Q9P2G4 905 aa8.65□□□□□ -1.02
RNU6-549P-201ENST00000384433 TLL1O43897 1013 aa8.64□□□□□ -1.03
RNU6-549P-201ENST00000384433 JUNDP17535 347 aa8.64□□□□□ -1.03
RNU6-549P-201ENST00000384433 F12P00748 615 aaPredicted RBP8.63□□□□□ -1.03
RNU6-549P-201ENST00000384433 WASHC4Q2M389 1173 aa8.62□□□□□ -1.03
RNU6-549P-201ENST00000384433 ALG2Q9H553 416 aa8.62□□□□□ -1.03
RNU6-549P-201ENST00000384433 PTPN5P54829 565 aa8.61□□□□□ -1.03
RNU6-549P-201ENST00000384433 ZNF516Q92618 1163 aa8.61□□□□□ -1.03
RNU6-549P-201ENST00000384433 SPSB2Q99619 263 aa8.61□□□□□ -1.03
RNU6-549P-201ENST00000384433 CDAN1Q8IWY9 1227 aa8.6□□□□□ -1.03
RNU6-549P-201ENST00000384433 MTRQ99707 1265 aa8.6□□□□□ -1.03
RNU6-549P-201ENST00000384433 DXOO77932 396 aaKnown RBP8.59□□□□□ -1.03
RNU6-549P-201ENST00000384433 FBXO45P0C2W1 286 aa8.59□□□□□ -1.03
RNU6-549P-201ENST00000384433 PTPRNQ16849 979 aa8.59□□□□□ -1.03
RNU6-549P-201ENST00000384433 MSS51Q4VC12 460 aa8.59□□□□□ -1.03
RNU6-549P-201ENST00000384433 POTEGQ6S5H5 508 aa8.59□□□□□ -1.03
RNU6-549P-201ENST00000384433 UCN2Q96RP3 112 aa8.59□□□□□ -1.03
RNU6-549P-201ENST00000384433 ZPR1O75312 459 aa8.58□□□□□ -1.04
RNU6-549P-201ENST00000384433 RFX1P22670 979 aa8.58□□□□□ -1.04
RNU6-549P-201ENST00000384433 CTHP32929 405 aa8.58□□□□□ -1.04
RNU6-549P-201ENST00000384433 TRIM26Q12899 539 aaPredicted RBP8.58□□□□□ -1.04
RNU6-549P-201ENST00000384433 FKBPLQ9UIM3 349 aa8.58□□□□□ -1.04
RNU6-549P-201ENST00000384433 MMP16P51512 607 aa8.57□□□□□ -1.04
RNU6-549P-201ENST00000384433 TJAP1Q5JTD0 557 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms