RNA–Protein interactions for RNA: ENST00000383329.7

HLA-C-203, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS ALT2 BASIC

Gene HLA-C, Length 1,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-203ENST00000383329 CDCA8Q53HL2 280 aa29.63■■■□□ 2.33
HLA-C-203ENST00000383329 MSH6P52701 1360 aa29.63■■■□□ 2.33
HLA-C-203ENST00000383329 STK26Q9P289 416 aa29.62■■■□□ 2.33
HLA-C-203ENST00000383329 SETD1AO15047 1707 aaKnown RBP29.62■■■□□ 2.33
HLA-C-203ENST00000383329 YTHDC2Q9H6S0 1430 aaKnown RBP29.62■■■□□ 2.33
HLA-C-203ENST00000383329 SBNO2Q9Y2G9 1366 aa29.61■■■□□ 2.33
HLA-C-203ENST00000383329 POLR3GLQ9BT43 218 aa29.6■■■□□ 2.33
HLA-C-203ENST00000383329 ASXL1Q8IXJ9 1541 aa29.6■■■□□ 2.33
HLA-C-203ENST00000383329 C14orf37Q86TY3 774 aa29.6■■■□□ 2.33
HLA-C-203ENST00000383329 LRPPRCP42704 1394 aaKnown RBP29.58■■■□□ 2.33
HLA-C-203ENST00000383329 MIER1Q8N108 512 aa29.58■■■□□ 2.33
HLA-C-203ENST00000383329 DISP3Q9P2K9 1392 aa29.58■■■□□ 2.33
HLA-C-203ENST00000383329 NCOA3Q9Y6Q9 1424 aa29.57■■■□□ 2.32
HLA-C-203ENST00000383329 ABCC11Q96J66 1382 aa29.57■■■□□ 2.32
HLA-C-203ENST00000383329 SIRT1Q96EB6 747 aa29.55■■■□□ 2.32
HLA-C-203ENST00000383329 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.55■■■□□ 2.32
HLA-C-203ENST00000383329 FAM135BQ49AJ0 1406 aa29.54■■■□□ 2.32
HLA-C-203ENST00000383329 SLAIN2Q9P270 581 aa29.52■■■□□ 2.32
HLA-C-203ENST00000383329 ROBO1Q9Y6N7 1651 aa29.52■■■□□ 2.32
HLA-C-203ENST00000383329 C19orf44Q9H6X5 657 aa29.52■■■□□ 2.32
HLA-C-203ENST00000383329 POGKQ9P215 609 aa29.52■■■□□ 2.32
HLA-C-203ENST00000383329 PRAM1Q96QH2 718 aa29.49■■■□□ 2.31
HLA-C-203ENST00000383329 DLC1Q96QB1 1528 aa29.49■■■□□ 2.31
HLA-C-203ENST00000383329 ARHGEF28Q8N1W1 1705 aaKnown RBP29.48■■■□□ 2.31
HLA-C-203ENST00000383329 PUS7Q96PZ0 661 aaKnown RBP29.47■■■□□ 2.31
HLA-C-203ENST00000383329 ANP32CO43423 234 aa29.47■■■□□ 2.31
HLA-C-203ENST00000383329 ATF3P18847 181 aa29.46■■■□□ 2.31
HLA-C-203ENST00000383329 CADPS2Q86UW7 1296 aa29.45■■■□□ 2.31
HLA-C-203ENST00000383329 ROBO2Q9HCK4 1378 aa29.45■■■□□ 2.3
HLA-C-203ENST00000383329 EVC2Q86UK5 1308 aa29.45■■■□□ 2.3
HLA-C-203ENST00000383329 TECPR2O15040 1411 aa29.44■■■□□ 2.3
HLA-C-203ENST00000383329 NALCNQ8IZF0 1738 aa29.43■■■□□ 2.3
HLA-C-203ENST00000383329 QRICH2Q9H0J4 1663 aa29.42■■■□□ 2.3
HLA-C-203ENST00000383329 PTCH1Q13635 1447 aa29.42■■■□□ 2.3
HLA-C-203ENST00000383329 SAFB2Q14151 953 aaKnown RBP eCLIP29.42■■■□□ 2.3
HLA-C-203ENST00000383329 WAPLQ7Z5K2 1190 aa29.41■■■□□ 2.3
HLA-C-203ENST00000383329 ADGRL3Q9HAR2 1447 aa29.4■■■□□ 2.3
HLA-C-203ENST00000383329 DCCP43146 1447 aa29.39■■■□□ 2.3
HLA-C-203ENST00000383329 PANK3Q9H999 370 aa29.36■■■□□ 2.29
HLA-C-203ENST00000383329 MINK1Q8N4C8 1332 aaPredicted RBP29.36■■■□□ 2.29
HLA-C-203ENST00000383329 MED1Q15648 1581 aaPredicted RBP29.36■■■□□ 2.29
HLA-C-203ENST00000383329 KNDC1Q76NI1 1749 aa29.35■■■□□ 2.29
HLA-C-203ENST00000383329 MST1RQ04912 1400 aa29.34■■■□□ 2.29
HLA-C-203ENST00000383329 PHLPP1O60346 1717 aa29.34■■■□□ 2.29
HLA-C-203ENST00000383329 PLEKHH1Q9ULM0 1364 aa29.34■■■□□ 2.29
HLA-C-203ENST00000383329 PER1O15534 1290 aaPredicted RBP29.32■■■□□ 2.28
HLA-C-203ENST00000383329 BRINP3Q76B58 766 aa29.31■■■□□ 2.28
HLA-C-203ENST00000383329 CDK19Q9BWU1 502 aa29.3■■■□□ 2.28
HLA-C-203ENST00000383329 TULP4Q9NRJ4 1543 aa29.29■■■□□ 2.28
HLA-C-203ENST00000383329 SRPK2P78362 688 aaKnown RBP29.28■■■□□ 2.28
HLA-C-203ENST00000383329 CABP2Q9NPB3 220 aa29.28■■■□□ 2.28
HLA-C-203ENST00000383329 PRKRIP1Q9H875 184 aaPredicted RBP29.27■■■□□ 2.28
HLA-C-203ENST00000383329 CCER2I3L3R5 266 aa29.26■■■□□ 2.28
HLA-C-203ENST00000383329 ILDR2Q71H61 639 aa29.26■■■□□ 2.28
HLA-C-203ENST00000383329 COL16A1Q07092 1604 aaPredicted RBP29.26■■■□□ 2.27
HLA-C-203ENST00000383329 WASLO00401 505 aaPredicted RBP29.25■■■□□ 2.27
HLA-C-203ENST00000383329 AHDC1Q5TGY3 1603 aaPredicted RBP29.24■■■□□ 2.27
HLA-C-203ENST00000383329 TMC1Q8TDI8 760 aa29.24■■■□□ 2.27
HLA-C-203ENST00000383329 SLC12A5Q9H2X9 1139 aa29.23■■■□□ 2.27
HLA-C-203ENST00000383329 ATAD2Q6PL18 1390 aa29.23■■■□□ 2.27
HLA-C-203ENST00000383329 C1orf167Q5SNV9 1468 aa29.22■■■□□ 2.27
HLA-C-203ENST00000383329 KNSTRNQ9Y448 316 aa29.22■■■□□ 2.27
HLA-C-203ENST00000383329 NINLQ9Y2I6 1382 aa29.2■■■□□ 2.27
HLA-C-203ENST00000383329 DDX17Q92841 729 aaKnown RBP29.2■■■□□ 2.26
HLA-C-203ENST00000383329 KTN1Q86UP2 1357 aaKnown RBP29.18■■■□□ 2.26
HLA-C-203ENST00000383329 MYOM1P52179 1685 aa29.18■■■□□ 2.26
HLA-C-203ENST00000383329 CDC42BPGQ6DT37 1551 aa29.18■■■□□ 2.26
HLA-C-203ENST00000383329 ORAI2Q96SN7 254 aa29.18■■■□□ 2.26
HLA-C-203ENST00000383329 NHSL1Q5SYE7 1610 aa29.17■■■□□ 2.26
HLA-C-203ENST00000383329 JCADQ9P266 1359 aa29.17■■■□□ 2.26
HLA-C-203ENST00000383329 RALBP1Q15311 655 aa29.17■■■□□ 2.26
HLA-C-203ENST00000383329 PHF23Q9BUL5 403 aaPredicted RBP29.14■■■□□ 2.26
HLA-C-203ENST00000383329 CARD14Q9BXL6 1004 aa29.14■■■□□ 2.26
HLA-C-203ENST00000383329 NUTM2FA1L443 756 aa29.13■■■□□ 2.25
HLA-C-203ENST00000383329 AMER1Q5JTC6 1135 aaPredicted RBP29.11■■■□□ 2.25
HLA-C-203ENST00000383329 NUDT16Q96DE0 195 aaKnown RBP29.11■■■□□ 2.25
HLA-C-203ENST00000383329 TERF2IPQ9NYB0 399 aa29.11■■■□□ 2.25
HLA-C-203ENST00000383329 ANKRD36BQ8N2N9 1353 aa29.1■■■□□ 2.25
HLA-C-203ENST00000383329 NPC1L1Q9UHC9 1359 aa29.1■■■□□ 2.25
HLA-C-203ENST00000383329 CABP1Q9NZU7 370 aa29.1■■■□□ 2.25
HLA-C-203ENST00000383329 CCDC61Q9Y6R9 512 aa29.09■■■□□ 2.25
HLA-C-203ENST00000383329 ADGRB2O60241 1585 aa29.09■■■□□ 2.25
HLA-C-203ENST00000383329 CNGB1Q14028 1251 aaPredicted RBP29.09■■■□□ 2.25
HLA-C-203ENST00000383329 FMN2Q9NZ56 1722 aa29.07■■■□□ 2.24
HLA-C-203ENST00000383329 SHPRHQ149N8 1683 aa29.07■■■□□ 2.24
HLA-C-203ENST00000383329 ESCO1Q5FWF5 840 aa29.06■■■□□ 2.24
HLA-C-203ENST00000383329 CC2D1BQ5T0F9 858 aaKnown RBP29.06■■■□□ 2.24
HLA-C-203ENST00000383329 HDGFL2Q7Z4V5 671 aaPredicted RBP29.05■■■□□ 2.24
HLA-C-203ENST00000383329 RGS17Q9UGC6 210 aaPredicted RBP29.05■■■□□ 2.24
HLA-C-203ENST00000383329 PARD3Q8TEW0 1356 aa29.05■■■□□ 2.24
HLA-C-203ENST00000383329 LRRC59Q96AG4 307 aaKnown RBP29.03■■■□□ 2.24
HLA-C-203ENST00000383329 LRP6O75581 1613 aa29.03■■■□□ 2.24
HLA-C-203ENST00000383329 SPATA31A6Q5VVP1 1343 aa29.02■■■□□ 2.24
HLA-C-203ENST00000383329 RGPD8O14715 1765 aaPredicted RBP29.02■■■□□ 2.24
HLA-C-203ENST00000383329 MYBBP1AQ9BQG0 1328 aaKnown RBP29.01■■■□□ 2.23
HLA-C-203ENST00000383329 PRR36Q9H6K5 1346 aa29.01■■■□□ 2.23
HLA-C-203ENST00000383329 NSD3Q9BZ95 1437 aa29.01■■■□□ 2.23
HLA-C-203ENST00000383329 SOS2Q07890 1332 aaPredicted RBP29■■■□□ 2.23
HLA-C-203ENST00000383329 A0A1W2PP64 1363 aa28.99■■■□□ 2.23
HLA-C-203ENST00000383329 PPIP5K1Q6PFW1 1433 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms