RNA–Protein interactions for RNA: ENST00000379802.7

DSP-201, Transcript of desmoplakin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DSP, Length 9,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-201ENST00000379802 RSPH6AQ9H0K4 717 aa12.28□□□□□ -0.44
DSP-201ENST00000379802 IPO9Q96P70 1041 aaKnown RBP12.28□□□□□ -0.44
DSP-201ENST00000379802 TXLNBQ8N3L3 684 aa12.28□□□□□ -0.44
DSP-201ENST00000379802 GNL3LQ9NVN8 582 aaKnown RBP12.28□□□□□ -0.44
DSP-201ENST00000379802 PPM1FP49593 454 aaPredicted RBP12.28□□□□□ -0.44
DSP-201ENST00000379802 IFT57Q9NWB7 429 aa12.27□□□□□ -0.44
DSP-201ENST00000379802 NEBLO76041 1014 aa12.27□□□□□ -0.45
DSP-201ENST00000379802 CENPQQ7L2Z9 268 aaPredicted RBP12.27□□□□□ -0.45
DSP-201ENST00000379802 SMARCE1Q969G3 411 aa12.27□□□□□ -0.45
DSP-201ENST00000379802 ENOX2Q16206 610 aaKnown RBP12.27□□□□□ -0.45
DSP-201ENST00000379802 FOSBP53539 338 aa12.27□□□□□ -0.45
DSP-201ENST00000379802 SMC3Q9UQE7 1217 aa12.27□□□□□ -0.45
DSP-201ENST00000379802 GBP2P32456 591 aaPredicted RBP12.27□□□□□ -0.45
DSP-201ENST00000379802 PDILTQ8N807 584 aa12.27□□□□□ -0.45
DSP-201ENST00000379802 CCP110O43303 1012 aa12.26□□□□□ -0.45
DSP-201ENST00000379802 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
DSP-201ENST00000379802 KIF7Q2M1P5 1343 aa12.26□□□□□ -0.45
DSP-201ENST00000379802 PIP4K2AP48426 406 aaPredicted RBP12.26□□□□□ -0.45
DSP-201ENST00000379802 RRP7AQ9Y3A4 280 aaKnown RBP12.26□□□□□ -0.45
DSP-201ENST00000379802 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
DSP-201ENST00000379802 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
DSP-201ENST00000379802 FKBP5Q13451 457 aaPredicted RBP12.25□□□□□ -0.45
DSP-201ENST00000379802 DDX19BQ9UMR2 479 aa12.25□□□□□ -0.45
DSP-201ENST00000379802 E9PSI1 815 aa12.25□□□□□ -0.45
DSP-201ENST00000379802 RBM19Q9Y4C8 960 aaKnown RBP12.25□□□□□ -0.45
DSP-201ENST00000379802 PSMA5P28066 241 aa12.25□□□□□ -0.45
DSP-201ENST00000379802 GOLGA6L7A0A1B0GV03 622 aa12.25□□□□□ -0.45
DSP-201ENST00000379802 MPHOSPH9Q99550 1183 aa12.25□□□□□ -0.45
DSP-201ENST00000379802 MTMR7Q9Y216 660 aa12.25□□□□□ -0.45
DSP-201ENST00000379802 STIM1Q13586 685 aa12.24□□□□□ -0.45
DSP-201ENST00000379802 TRAK1Q9UPV9 953 aa12.24□□□□□ -0.45
DSP-201ENST00000379802 NEUROD6Q96NK8 337 aa12.24□□□□□ -0.45
DSP-201ENST00000379802 ANKRD62A6NC57 917 aa12.24□□□□□ -0.45
DSP-201ENST00000379802 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
DSP-201ENST00000379802 SLC4A3P48751 1232 aa12.23□□□□□ -0.45
DSP-201ENST00000379802 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.23□□□□□ -0.45
DSP-201ENST00000379802 RIC3Q7Z5B4 369 aa12.23□□□□□ -0.45
DSP-201ENST00000379802 ZNHIT6Q9NWK9 470 aaKnown RBP12.23□□□□□ -0.45
DSP-201ENST00000379802 WDHD1O75717 1129 aaPredicted RBP12.23□□□□□ -0.45
DSP-201ENST00000379802 PDCL3Q9H2J4 239 aa12.23□□□□□ -0.45
DSP-201ENST00000379802 INTS3Q68E01 1043 aaKnown RBP12.23□□□□□ -0.45
DSP-201ENST00000379802 ATP2B2Q01814 1243 aa12.23□□□□□ -0.45
DSP-201ENST00000379802 MYBBP1AQ9BQG0 1328 aaKnown RBP12.23□□□□□ -0.45
DSP-201ENST00000379802 VPS8Q8N3P4 1428 aa12.22□□□□□ -0.45
DSP-201ENST00000379802 FILIP1LQ4L180 1135 aa12.22□□□□□ -0.45
DSP-201ENST00000379802 INCENPQ9NQS7 918 aa12.22□□□□□ -0.45
DSP-201ENST00000379802 HMGB2P26583 209 aaKnown RBP12.22□□□□□ -0.45
DSP-201ENST00000379802 MATR3P43243 847 aaKnown RBP eCLIP12.22□□□□□ -0.45
DSP-201ENST00000379802 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
DSP-201ENST00000379802 MPHOSPH10O00566 681 aaKnown RBP12.22□□□□□ -0.45
DSP-201ENST00000379802 KINO60870 393 aaKnown RBP12.22□□□□□ -0.45
DSP-201ENST00000379802 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.22□□□□□ -0.45
DSP-201ENST00000379802 TTLL5Q6EMB2 1281 aa12.22□□□□□ -0.45
DSP-201ENST00000379802 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
DSP-201ENST00000379802 SDF4Q9BRK5 362 aa12.21□□□□□ -0.45
DSP-201ENST00000379802 API5Q9BZZ5 524 aaKnown RBP12.21□□□□□ -0.45
DSP-201ENST00000379802 PLIN1O60240 522 aa12.21□□□□□ -0.45
DSP-201ENST00000379802 SOGA1O94964 1423 aa12.21□□□□□ -0.46
DSP-201ENST00000379802 GPRASP1Q5JY77 1395 aa12.2□□□□□ -0.46
DSP-201ENST00000379802 ELL2O00472 640 aaPredicted RBP12.2□□□□□ -0.46
DSP-201ENST00000379802 NLRP2Q9NX02 1062 aa12.2□□□□□ -0.46
DSP-201ENST00000379802 RABEP1Q15276 862 aa12.2□□□□□ -0.46
DSP-201ENST00000379802 AXDND1Q5T1B0 1012 aaPredicted RBP12.2□□□□□ -0.46
DSP-201ENST00000379802 ERC1Q8IUD2 1116 aa12.2□□□□□ -0.46
DSP-201ENST00000379802 MINK1Q8N4C8 1332 aaPredicted RBP12.2□□□□□ -0.46
DSP-201ENST00000379802 CNTROBQ8N137 903 aa12.2□□□□□ -0.46
DSP-201ENST00000379802 TSPYL1Q9H0U9 437 aa12.19□□□□□ -0.46
DSP-201ENST00000379802 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.19□□□□□ -0.46
DSP-201ENST00000379802 TMEM87AQ8NBN3 555 aa12.19□□□□□ -0.46
DSP-201ENST00000379802 PDCP20941 246 aa12.19□□□□□ -0.46
DSP-201ENST00000379802 ABCC8Q09428 1581 aa12.19□□□□□ -0.46
DSP-201ENST00000379802 RBM5P52756 815 aaKnown RBP eCLIP12.19□□□□□ -0.46
DSP-201ENST00000379802 HIP1O00291 1037 aa12.19□□□□□ -0.46
DSP-201ENST00000379802 IQCEQ6IPM2 695 aa12.19□□□□□ -0.46
DSP-201ENST00000379802 TSPYL4Q9UJ04 414 aa12.19□□□□□ -0.46
DSP-201ENST00000379802 JMYQ8N9B5 988 aa12.18□□□□□ -0.46
DSP-201ENST00000379802 NUCB2P80303 420 aa12.18□□□□□ -0.46
DSP-201ENST00000379802 HNRNPMP52272 730 aaKnown RBP eCLIP12.18□□□□□ -0.46
DSP-201ENST00000379802 BCL2L13Q9BXK5 485 aa12.18□□□□□ -0.46
DSP-201ENST00000379802 RAB3GAP2Q9H2M9 1393 aa12.18□□□□□ -0.46
DSP-201ENST00000379802 SMC2O95347 1197 aa12.18□□□□□ -0.46
DSP-201ENST00000379802 DIAPH1O60610 1272 aaKnown RBP12.17□□□□□ -0.46
DSP-201ENST00000379802 CT47B1P0C2W7 299 aaPredicted RBP12.17□□□□□ -0.46
DSP-201ENST00000379802 FEZ1Q99689 392 aa12.17□□□□□ -0.46
DSP-201ENST00000379802 PLCD4Q9BRC7 762 aa12.17□□□□□ -0.46
DSP-201ENST00000379802 UBTFL1P0CB47 393 aaPredicted RBP12.17□□□□□ -0.46
DSP-201ENST00000379802 SKIDA1Q1XH10 827 aa12.17□□□□□ -0.46
DSP-201ENST00000379802 DHX8Q14562 1220 aaKnown RBP12.17□□□□□ -0.46
DSP-201ENST00000379802 KIAA0754O94854 1291 aa12.17□□□□□ -0.46
DSP-201ENST00000379802 POTEJP0CG39 1038 aa12.17□□□□□ -0.46
DSP-201ENST00000379802 HMGN5P82970 282 aaKnown RBP12.17□□□□□ -0.46
DSP-201ENST00000379802 ZNF396Q96N95 335 aaPredicted RBP12.17□□□□□ -0.46
DSP-201ENST00000379802 GRIPAP1Q4V328 841 aa12.17□□□□□ -0.46
DSP-201ENST00000379802 DEF6Q9H4E7 631 aa12.16□□□□□ -0.46
DSP-201ENST00000379802 CFAP65Q6ZU64 1925 aaKnown RBP12.16□□□□□ -0.46
DSP-201ENST00000379802 FSD1Q9BTV5 496 aa12.16□□□□□ -0.46
DSP-201ENST00000379802 LETM1O95202 739 aaPredicted RBP12.16□□□□□ -0.46
DSP-201ENST00000379802 LEKR1Q6ZMV7 388 aa12.16□□□□□ -0.46
DSP-201ENST00000379802 AIMP1Q12904 312 aaKnown RBP12.16□□□□□ -0.46
DSP-201ENST00000379802 TRIM22Q8IYM9 498 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms