RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ROCK2O75116 1388 aaKnown RBP10.4□□□□□ -0.74
NHLRC3-201ENST00000379599 RAD51AP2Q09MP3 1159 aa10.4□□□□□ -0.74
NHLRC3-201ENST00000379599 DDX41Q9UJV9 622 aaKnown RBP10.4□□□□□ -0.74
NHLRC3-201ENST00000379599 TIAM1Q13009 1591 aa10.4□□□□□ -0.75
NHLRC3-201ENST00000379599 EIF3AQ14152 1382 aaKnown RBP10.4□□□□□ -0.75
NHLRC3-201ENST00000379599 ARHGAP35Q9NRY4 1499 aa10.4□□□□□ -0.75
NHLRC3-201ENST00000379599 PRPF40AO75400 957 aaKnown RBP10.39□□□□□ -0.75
NHLRC3-201ENST00000379599 SRPK2P78362 688 aaKnown RBP10.39□□□□□ -0.75
NHLRC3-201ENST00000379599 PLPPR3Q6T4P5 718 aa10.39□□□□□ -0.75
NHLRC3-201ENST00000379599 PANK1Q8TE04 598 aa10.39□□□□□ -0.75
NHLRC3-201ENST00000379599 SPATA31E1Q6ZUB1 1445 aa10.39□□□□□ -0.75
NHLRC3-201ENST00000379599 DHX16O60231 1041 aaKnown RBP10.39□□□□□ -0.75
NHLRC3-201ENST00000379599 GOLGA2Q08379 1002 aa10.39□□□□□ -0.75
NHLRC3-201ENST00000379599 CT47A1Q5JQC4 288 aaPredicted RBP10.39□□□□□ -0.75
NHLRC3-201ENST00000379599 CARD10Q9BWT7 1032 aa10.39□□□□□ -0.75
NHLRC3-201ENST00000379599 ABCA5Q8WWZ7 1642 aa10.39□□□□□ -0.75
NHLRC3-201ENST00000379599 VIRMAQ69YN4 1812 aaKnown RBP10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 FKBP5Q13451 457 aaPredicted RBP10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 C10orf67Q8IYJ2 551 aa10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 NCAPGQ9BPX3 1015 aa10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 CGNL1Q0VF96 1302 aa10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 WDR43Q15061 677 aaKnown RBP eCLIP10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 LRSAM1Q6UWE0 723 aa10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 USP47Q96K76 1375 aa10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 GYS2P54840 703 aa10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 PLCB2Q00722 1185 aa10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 FAM43BQ6ZT52 329 aaPredicted RBP10.38□□□□□ -0.75
NHLRC3-201ENST00000379599 HFM1A2PYH4 1435 aa10.37□□□□□ -0.75
NHLRC3-201ENST00000379599 NCBP1Q09161 790 aaKnown RBP10.37□□□□□ -0.75
NHLRC3-201ENST00000379599 ICE2Q659A1 982 aa10.37□□□□□ -0.75
NHLRC3-201ENST00000379599 MPHOSPH9Q99550 1183 aa10.37□□□□□ -0.75
NHLRC3-201ENST00000379599 MORC2Q9Y6X9 1032 aaPredicted RBP10.37□□□□□ -0.75
NHLRC3-201ENST00000379599 NOP2P46087 812 aaKnown RBP10.37□□□□□ -0.75
NHLRC3-201ENST00000379599 PMFBP1Q8TBY8 1022 aa10.37□□□□□ -0.75
NHLRC3-201ENST00000379599 CEP83Q9Y592 693 aa10.37□□□□□ -0.75
NHLRC3-201ENST00000379599 GOLGA6L6A8MZA4 724 aa10.36□□□□□ -0.75
NHLRC3-201ENST00000379599 NAA30Q147X3 362 aaPredicted RBP10.36□□□□□ -0.75
NHLRC3-201ENST00000379599 KIF18AQ8NI77 898 aa10.36□□□□□ -0.75
NHLRC3-201ENST00000379599 SNX21Q969T3 373 aa10.36□□□□□ -0.75
NHLRC3-201ENST00000379599 MTUS2Q5JR59 1369 aa10.35□□□□□ -0.75
NHLRC3-201ENST00000379599 ST7Q9NRC1 585 aa10.35□□□□□ -0.75
NHLRC3-201ENST00000379599 LMBRD1Q9NUN5 540 aa10.35□□□□□ -0.75
NHLRC3-201ENST00000379599 CCDC172P0C7W6 258 aa10.35□□□□□ -0.75
NHLRC3-201ENST00000379599 BRPF1P55201 1214 aaPredicted RBP10.35□□□□□ -0.75
NHLRC3-201ENST00000379599 DRC1Q96MC2 740 aa10.35□□□□□ -0.75
NHLRC3-201ENST00000379599 NCOA3Q9Y6Q9 1424 aa10.35□□□□□ -0.75
NHLRC3-201ENST00000379599 GRIPAP1Q4V328 841 aa10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 CTR9Q6PD62 1173 aa10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 EGFL6Q8IUX8 553 aa10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 GAS2L2Q8NHY3 880 aa10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 SLC26A8Q96RN1 970 aa10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 ADAMTS8Q9UP79 889 aa10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 NAIPQ13075 1403 aa10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 CTIFO43310 598 aaKnown RBP10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 NOL10Q9BSC4 688 aaKnown RBP10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 K7ELQ4 463 aaPredicted RBP10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 PHF14O94880 888 aa10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 TMEM63CQ9P1W3 806 aa10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 USP25Q9UHP3 1055 aa10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 PTPRKQ15262 1439 aa10.34□□□□□ -0.75
NHLRC3-201ENST00000379599 TRIM66O15016 1216 aa10.33□□□□□ -0.76
NHLRC3-201ENST00000379599 RWDD1Q9H446 243 aaPredicted RBP10.33□□□□□ -0.76
NHLRC3-201ENST00000379599 TSPY26PQ9H489 355 aa10.33□□□□□ -0.76
NHLRC3-201ENST00000379599 GPT2Q8TD30 523 aa10.33□□□□□ -0.76
NHLRC3-201ENST00000379599 CD2BP2O95400 341 aaKnown RBP10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 MIA2Q96PC5 1412 aa10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 PTPN23Q9H3S7 1636 aa10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 SPTLC3Q9NUV7 552 aa10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 PCDHB15Q9Y5E8 787 aa10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 GOLIM4O00461 696 aa10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 SPINK5Q9NQ38 1064 aaPredicted RBP10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 RTEL1-TNFRSF6BF6WH68 1400 aa10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 GUCY2CP25092 1073 aa10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 CASQ1P31415 396 aa10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 SART3Q15020 963 aaKnown RBP10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 FOXD4L5Q5VV16 416 aaPredicted RBP10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 FOXD4L4Q8WXT5 416 aaPredicted RBP10.32□□□□□ -0.76
NHLRC3-201ENST00000379599 PRXQ9BXM0 1461 aa10.31□□□□□ -0.76
NHLRC3-201ENST00000379599 RBM42Q9BTD8 480 aaKnown RBP10.31□□□□□ -0.76
NHLRC3-201ENST00000379599 SCAPERQ9BY12 1400 aa10.31□□□□□ -0.76
NHLRC3-201ENST00000379599 ADCY5O95622 1261 aa10.31□□□□□ -0.76
NHLRC3-201ENST00000379599 CYP2C19P33261 490 aa10.31□□□□□ -0.76
NHLRC3-201ENST00000379599 SYT10Q6XYQ8 523 aa10.31□□□□□ -0.76
NHLRC3-201ENST00000379599 STK26Q9P289 416 aa10.31□□□□□ -0.76
NHLRC3-201ENST00000379599 PLEKHH1Q9ULM0 1364 aa10.31□□□□□ -0.76
NHLRC3-201ENST00000379599 PDE3AQ14432 1141 aa10.31□□□□□ -0.76
NHLRC3-201ENST00000379599 TDO2P48775 406 aa10.3□□□□□ -0.76
NHLRC3-201ENST00000379599 SLFN5Q08AF3 891 aa10.3□□□□□ -0.76
NHLRC3-201ENST00000379599 DNAJC21Q5F1R6 531 aaKnown RBP10.3□□□□□ -0.76
NHLRC3-201ENST00000379599 GOLGA6L1Q8N7Z2 621 aa10.3□□□□□ -0.76
NHLRC3-201ENST00000379599 NEK11Q8NG66 645 aa10.3□□□□□ -0.76
NHLRC3-201ENST00000379599 NUCB2P80303 420 aa10.3□□□□□ -0.76
NHLRC3-201ENST00000379599 SATB1Q01826 763 aa10.3□□□□□ -0.76
NHLRC3-201ENST00000379599 TPRNQ4KMQ1 711 aa10.3□□□□□ -0.76
NHLRC3-201ENST00000379599 CHAMP1Q96JM3 812 aa10.3□□□□□ -0.76
NHLRC3-201ENST00000379599 CARD11Q9BXL7 1154 aa10.3□□□□□ -0.76
NHLRC3-201ENST00000379599 MYO1CO00159 1063 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 NSFL1CQ9UNZ2 370 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms