RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 PUS7Q96PZ0 661 aaKnown RBP23.64■■□□□ 1.38
TDP2-202ENST00000378198 ARHGEF28Q8N1W1 1705 aaKnown RBP23.64■■□□□ 1.38
TDP2-202ENST00000378198 NINLQ9Y2I6 1382 aa23.63■■□□□ 1.37
TDP2-202ENST00000378198 SLC12A5Q9H2X9 1139 aa23.63■■□□□ 1.37
TDP2-202ENST00000378198 BCAR3O75815 825 aa23.62■■□□□ 1.37
TDP2-202ENST00000378198 WWC1Q8IX03 1113 aa23.62■■□□□ 1.37
TDP2-202ENST00000378198 NEO1Q92859 1461 aa23.61■■□□□ 1.37
TDP2-202ENST00000378198 TMEM132EQ6IEE7 984 aa23.61■■□□□ 1.37
TDP2-202ENST00000378198 DMRT2Q9Y5R5 561 aa23.61■■□□□ 1.37
TDP2-202ENST00000378198 PDE3AQ14432 1141 aa23.6■■□□□ 1.37
TDP2-202ENST00000378198 FAM161AQ3B820 660 aa23.6■■□□□ 1.37
TDP2-202ENST00000378198 RUNDC1Q96C34 613 aa23.6■■□□□ 1.37
TDP2-202ENST00000378198 NEXMIFQ5QGS0 1516 aa23.6■■□□□ 1.37
TDP2-202ENST00000378198 CGNL1Q0VF96 1302 aa23.59■■□□□ 1.37
TDP2-202ENST00000378198 VGFO15240 615 aaPredicted RBP23.58■■□□□ 1.37
TDP2-202ENST00000378198 IQSEC2Q5JU85 1478 aa23.58■■□□□ 1.37
TDP2-202ENST00000378198 OSCARQ8IYS5 282 aa23.58■■□□□ 1.36
TDP2-202ENST00000378198 EVC2Q86UK5 1308 aa23.57■■□□□ 1.36
TDP2-202ENST00000378198 DIP2CQ9Y2E4 1556 aa23.57■■□□□ 1.36
TDP2-202ENST00000378198 NSD2O96028 1365 aa23.56■■□□□ 1.36
TDP2-202ENST00000378198 TULP4Q9NRJ4 1543 aa23.56■■□□□ 1.36
TDP2-202ENST00000378198 VIRMAQ69YN4 1812 aaKnown RBP23.56■■□□□ 1.36
TDP2-202ENST00000378198 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
TDP2-202ENST00000378198 CFAP53Q96M91 514 aa23.56■■□□□ 1.36
TDP2-202ENST00000378198 ARHGAP31Q2M1Z3 1444 aa23.55■■□□□ 1.36
TDP2-202ENST00000378198 ANKRD36BQ8N2N9 1353 aa23.55■■□□□ 1.36
TDP2-202ENST00000378198 USP35Q9P2H5 1018 aa23.55■■□□□ 1.36
TDP2-202ENST00000378198 TNNT2P45379 298 aaPredicted RBP23.54■■□□□ 1.36
TDP2-202ENST00000378198 C8orf34Q49A92 452 aa23.54■■□□□ 1.36
TDP2-202ENST00000378198 NCBP3Q53F19 620 aaKnown RBP23.53■■□□□ 1.36
TDP2-202ENST00000378198 WDR63Q8IWG1 891 aa23.53■■□□□ 1.36
TDP2-202ENST00000378198 PHF23Q9BUL5 403 aaPredicted RBP23.53■■□□□ 1.36
TDP2-202ENST00000378198 TCP11L2Q8N4U5 519 aa23.53■■□□□ 1.36
TDP2-202ENST00000378198 MTHFSP49914 203 aa23.52■■□□□ 1.36
TDP2-202ENST00000378198 RICTORQ6R327 1708 aa23.52■■□□□ 1.36
TDP2-202ENST00000378198 CCDC27Q2M243 656 aa23.52■■□□□ 1.35
TDP2-202ENST00000378198 ZFYVE9O95405 1425 aa23.51■■□□□ 1.35
TDP2-202ENST00000378198 CANXP27824 592 aaKnown RBP23.5■■□□□ 1.35
TDP2-202ENST00000378198 LAS1LQ9Y4W2 734 aaKnown RBP23.5■■□□□ 1.35
TDP2-202ENST00000378198 RGS3P49796 1198 aa23.49■■□□□ 1.35
TDP2-202ENST00000378198 MYO5BQ9ULV0 1848 aa23.49■■□□□ 1.35
TDP2-202ENST00000378198 AAMPQ13685 434 aa23.48■■□□□ 1.35
TDP2-202ENST00000378198 NEUROD2Q15784 382 aa23.48■■□□□ 1.35
TDP2-202ENST00000378198 RAPGEF3O95398 923 aa23.48■■□□□ 1.35
TDP2-202ENST00000378198 CLUAP1Q96AJ1 413 aa23.48■■□□□ 1.35
TDP2-202ENST00000378198 NEFMP07197 916 aa23.47■■□□□ 1.35
TDP2-202ENST00000378198 RRP7AQ9Y3A4 280 aaKnown RBP23.47■■□□□ 1.35
TDP2-202ENST00000378198 IGHDP01880 384 aa23.46■■□□□ 1.35
TDP2-202ENST00000378198 RARSP54136 660 aaKnown RBP23.46■■□□□ 1.35
TDP2-202ENST00000378198 SLC52A1Q9NWF4 448 aa23.46■■□□□ 1.35
TDP2-202ENST00000378198 ADGRB2O60241 1585 aa23.46■■□□□ 1.35
TDP2-202ENST00000378198 NUTM2DQ5VT03 806 aaPredicted RBP23.45■■□□□ 1.35
TDP2-202ENST00000378198 PREX1Q8TCU6 1659 aa23.45■■□□□ 1.34
TDP2-202ENST00000378198 ANKRD26Q9UPS8 1709 aa23.44■■□□□ 1.34
TDP2-202ENST00000378198 IDI1Q13907 227 aa23.44■■□□□ 1.34
TDP2-202ENST00000378198 PANK1Q8TE04 598 aa23.44■■□□□ 1.34
TDP2-202ENST00000378198 COG6Q9Y2V7 657 aa23.44■■□□□ 1.34
TDP2-202ENST00000378198 DAXXQ9UER7 740 aaPredicted RBP23.44■■□□□ 1.34
TDP2-202ENST00000378198 CABP2Q9NPB3 220 aa23.43■■□□□ 1.34
TDP2-202ENST00000378198 TMEM131LA2VDJ0 1609 aa23.43■■□□□ 1.34
TDP2-202ENST00000378198 MAPK8IP3Q9UPT6 1336 aa23.42■■□□□ 1.34
TDP2-202ENST00000378198 FRAT1Q92837 279 aaPredicted RBP23.42■■□□□ 1.34
TDP2-202ENST00000378198 CLTCQ00610 1675 aaKnown RBP23.41■■□□□ 1.34
TDP2-202ENST00000378198 ABCC11Q96J66 1382 aa23.41■■□□□ 1.34
TDP2-202ENST00000378198 MYH16Q9H6N6 1097 aa23.41■■□□□ 1.34
TDP2-202ENST00000378198 U2AF1L5P0DN76 240 aaPredicted RBP23.39■■□□□ 1.34
TDP2-202ENST00000378198 U2AF1Q01081 240 aaKnown RBP eCLIP23.39■■□□□ 1.34
TDP2-202ENST00000378198 PMFBP1Q8TBY8 1022 aa23.39■■□□□ 1.34
TDP2-202ENST00000378198 A0A1W2PP64 1363 aa23.38■■□□□ 1.33
TDP2-202ENST00000378198 ATAD2Q6PL18 1390 aa23.37■■□□□ 1.33
TDP2-202ENST00000378198 PTPRMP28827 1452 aa23.37■■□□□ 1.33
TDP2-202ENST00000378198 MED14O60244 1454 aa23.36■■□□□ 1.33
TDP2-202ENST00000378198 SRPK2P78362 688 aaKnown RBP23.36■■□□□ 1.33
TDP2-202ENST00000378198 YEATS2Q9ULM3 1422 aa23.35■■□□□ 1.33
TDP2-202ENST00000378198 CT47B1P0C2W7 299 aaPredicted RBP23.34■■□□□ 1.33
TDP2-202ENST00000378198 SAFB2Q14151 953 aaKnown RBP eCLIP23.34■■□□□ 1.33
TDP2-202ENST00000378198 STK26Q9P289 416 aa23.34■■□□□ 1.33
TDP2-202ENST00000378198 TERF2IPQ9NYB0 399 aa23.33■■□□□ 1.33
TDP2-202ENST00000378198 COL3A1P02461 1466 aaPredicted RBP23.33■■□□□ 1.32
TDP2-202ENST00000378198 SLC4A3P48751 1232 aa23.32■■□□□ 1.32
TDP2-202ENST00000378198 ZMYM3Q14202 1370 aa23.32■■□□□ 1.32
TDP2-202ENST00000378198 YTHDC2Q9H6S0 1430 aaKnown RBP23.32■■□□□ 1.32
TDP2-202ENST00000378198 RLBP1P12271 317 aa23.31■■□□□ 1.32
TDP2-202ENST00000378198 KIF20BQ96Q89 1820 aa23.31■■□□□ 1.32
TDP2-202ENST00000378198 PLEKHF1Q96S99 279 aa23.3■■□□□ 1.32
TDP2-202ENST00000378198 GGNBP2Q9H3C7 697 aa23.29■■□□□ 1.32
TDP2-202ENST00000378198 CD163L1Q9NR16 1453 aa23.29■■□□□ 1.32
TDP2-202ENST00000378198 BCL2L13Q9BXK5 485 aa23.29■■□□□ 1.32
TDP2-202ENST00000378198 PCDHB15Q9Y5E8 787 aa23.29■■□□□ 1.32
TDP2-202ENST00000378198 ALKQ9UM73 1620 aa23.29■■□□□ 1.32
TDP2-202ENST00000378198 NFKBIBQ15653 356 aa23.28■■□□□ 1.32
TDP2-202ENST00000378198 ZKSCAN2Q63HK3 967 aa23.28■■□□□ 1.32
TDP2-202ENST00000378198 RWDD1Q9H446 243 aaPredicted RBP23.28■■□□□ 1.32
TDP2-202ENST00000378198 POGKQ9P215 609 aa23.28■■□□□ 1.32
TDP2-202ENST00000378198 TNNQ9UQP3 1299 aa23.28■■□□□ 1.32
TDP2-202ENST00000378198 FYB1O15117 783 aa23.28■■□□□ 1.32
TDP2-202ENST00000378198 PRAM1Q96QH2 718 aa23.28■■□□□ 1.32
TDP2-202ENST00000378198 MINK1Q8N4C8 1332 aaPredicted RBP23.27■■□□□ 1.32
TDP2-202ENST00000378198 TMPOP42166 694 aaKnown RBP23.27■■□□□ 1.32
TDP2-202ENST00000378198 NLRP1Q9C000 1473 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms