RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 UBTFL1P0CB47 393 aaPredicted RBP21.65■■□□□ 1.06
CNTNAP3-204ENST00000377656 GOLGA6L1Q8N7Z2 621 aa21.65■■□□□ 1.06
CNTNAP3-204ENST00000377656 AIMP1Q12904 312 aaKnown RBP21.64■■□□□ 1.06
CNTNAP3-204ENST00000377656 TPM1P09493 284 aa21.63■■□□□ 1.05
CNTNAP3-204ENST00000377656 PPP2R1AP30153 589 aa21.63■■□□□ 1.05
CNTNAP3-204ENST00000377656 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
CNTNAP3-204ENST00000377656 TXNDC2Q86VQ3 553 aa21.63■■□□□ 1.05
CNTNAP3-204ENST00000377656 TRIM34Q9BYJ4 488 aa21.63■■□□□ 1.05
CNTNAP3-204ENST00000377656 C22orf23Q9BZE7 217 aa21.62■■□□□ 1.05
CNTNAP3-204ENST00000377656 EHBP1L1Q8N3D4 1523 aa21.62■■□□□ 1.05
CNTNAP3-204ENST00000377656 NBPF1Q3BBV0 1214 aa21.62■■□□□ 1.05
CNTNAP3-204ENST00000377656 GAS2L2Q8NHY3 880 aa21.62■■□□□ 1.05
CNTNAP3-204ENST00000377656 PDE4CQ08493 712 aa21.61■■□□□ 1.05
CNTNAP3-204ENST00000377656 SMC3Q9UQE7 1217 aa21.61■■□□□ 1.05
CNTNAP3-204ENST00000377656 NUCB2P80303 420 aa21.61■■□□□ 1.05
CNTNAP3-204ENST00000377656 NEUROD6Q96NK8 337 aa21.61■■□□□ 1.05
CNTNAP3-204ENST00000377656 RAD21O60216 631 aa21.61■■□□□ 1.05
CNTNAP3-204ENST00000377656 A0A0U1RQG5 324 aaPredicted RBP21.61■■□□□ 1.05
CNTNAP3-204ENST00000377656 ABTB2Q8N961 1025 aa21.61■■□□□ 1.05
CNTNAP3-204ENST00000377656 GPRASP1Q5JY77 1395 aa21.61■■□□□ 1.05
CNTNAP3-204ENST00000377656 VPS37CA5D8V6 355 aaPredicted RBP21.6■■□□□ 1.05
CNTNAP3-204ENST00000377656 BICD2Q8TD16 824 aa21.6■■□□□ 1.05
CNTNAP3-204ENST00000377656 PRKAR2BP31323 418 aa21.6■■□□□ 1.05
CNTNAP3-204ENST00000377656 HMGXB3Q12766 1538 aa21.6■■□□□ 1.05
CNTNAP3-204ENST00000377656 TPM2P07951 284 aa21.6■■□□□ 1.05
CNTNAP3-204ENST00000377656 GNAI3P08754 354 aa21.6■■□□□ 1.05
CNTNAP3-204ENST00000377656 PRAM1Q96QH2 718 aa21.59■■□□□ 1.05
CNTNAP3-204ENST00000377656 DHX16O60231 1041 aaKnown RBP21.59■■□□□ 1.05
CNTNAP3-204ENST00000377656 NFXL1Q6ZNB6 911 aa21.59■■□□□ 1.05
CNTNAP3-204ENST00000377656 CDCA7LQ96GN5 454 aa21.59■■□□□ 1.05
CNTNAP3-204ENST00000377656 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
CNTNAP3-204ENST00000377656 ERICH2A1L162 156 aa21.58■■□□□ 1.05
CNTNAP3-204ENST00000377656 CDC45O75419 566 aa21.58■■□□□ 1.04
CNTNAP3-204ENST00000377656 CCDC30Q5VVM6 783 aa21.58■■□□□ 1.04
CNTNAP3-204ENST00000377656 RALYLQ86SE5 291 aaKnown RBP21.57■■□□□ 1.04
CNTNAP3-204ENST00000377656 CLASRPQ8N2M8 674 aaKnown RBP21.57■■□□□ 1.04
CNTNAP3-204ENST00000377656 CCDC47Q96A33 483 aaKnown RBP21.57■■□□□ 1.04
CNTNAP3-204ENST00000377656 SLC12A5Q9H2X9 1139 aa21.56■■□□□ 1.04
CNTNAP3-204ENST00000377656 MEX3CQ5U5Q3 659 aaKnown RBP21.56■■□□□ 1.04
CNTNAP3-204ENST00000377656 EXOSC9Q06265 439 aaKnown RBP21.55■■□□□ 1.04
CNTNAP3-204ENST00000377656 C9orf84Q5VXU9 1444 aa21.55■■□□□ 1.04
CNTNAP3-204ENST00000377656 WASHC4Q2M389 1173 aa21.55■■□□□ 1.04
CNTNAP3-204ENST00000377656 PLEKHO1Q53GL0 409 aaPredicted RBP21.55■■□□□ 1.04
CNTNAP3-204ENST00000377656 ESCO1Q5FWF5 840 aa21.55■■□□□ 1.04
CNTNAP3-204ENST00000377656 KIAA1107Q9UPP5 1409 aa21.55■■□□□ 1.04
CNTNAP3-204ENST00000377656 NBPF8Q3BBV2 869 aa21.54■■□□□ 1.04
CNTNAP3-204ENST00000377656 HOOK1Q9UJC3 728 aaKnown RBP21.54■■□□□ 1.04
CNTNAP3-204ENST00000377656 ANKRD20A12PQ8NF67 263 aa21.54■■□□□ 1.04
CNTNAP3-204ENST00000377656 SLC52A1Q9NWF4 448 aa21.54■■□□□ 1.04
CNTNAP3-204ENST00000377656 SURF6O75683 361 aaKnown RBP21.54■■□□□ 1.04
CNTNAP3-204ENST00000377656 CTDP1Q9Y5B0 961 aaPredicted RBP21.54■■□□□ 1.04
CNTNAP3-204ENST00000377656 TCEAL9Q9UHQ7 104 aa21.54■■□□□ 1.04
CNTNAP3-204ENST00000377656 RBM33Q96EV2 1170 aaKnown RBP21.53■■□□□ 1.04
CNTNAP3-204ENST00000377656 SAFBQ15424 915 aaKnown RBP eCLIP21.53■■□□□ 1.04
CNTNAP3-204ENST00000377656 TWISTNBQ3B726 338 aaPredicted RBP21.53■■□□□ 1.04
CNTNAP3-204ENST00000377656 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.53■■□□□ 1.04
CNTNAP3-204ENST00000377656 SCAPERQ9BY12 1400 aa21.53■■□□□ 1.04
CNTNAP3-204ENST00000377656 PLEKHH2Q8IVE3 1493 aa21.53■■□□□ 1.04
CNTNAP3-204ENST00000377656 IPO7O95373 1038 aaKnown RBP21.53■■□□□ 1.04
CNTNAP3-204ENST00000377656 PROSER2Q86WR7 435 aaPredicted RBP21.52■■□□□ 1.04
CNTNAP3-204ENST00000377656 CCAR2Q8N163 923 aaKnown RBP21.52■■□□□ 1.04
CNTNAP3-204ENST00000377656 FBXW7Q969H0 707 aa21.51■■□□□ 1.03
CNTNAP3-204ENST00000377656 TROQ12816 1431 aaPredicted RBP21.51■■□□□ 1.03
CNTNAP3-204ENST00000377656 ZNF692Q9BU19 519 aaPredicted RBP21.51■■□□□ 1.03
CNTNAP3-204ENST00000377656 PDE3AQ14432 1141 aa21.5■■□□□ 1.03
CNTNAP3-204ENST00000377656 THEMISQ8N1K5 641 aaPredicted RBP21.5■■□□□ 1.03
CNTNAP3-204ENST00000377656 CNTROBQ8N137 903 aa21.5■■□□□ 1.03
CNTNAP3-204ENST00000377656 CCDC73Q6ZRK6 1079 aa21.5■■□□□ 1.03
CNTNAP3-204ENST00000377656 NINLQ9Y2I6 1382 aa21.49■■□□□ 1.03
CNTNAP3-204ENST00000377656 FSD1Q9BTV5 496 aa21.49■■□□□ 1.03
CNTNAP3-204ENST00000377656 CABP1Q9NZU7 370 aa21.49■■□□□ 1.03
CNTNAP3-204ENST00000377656 PCMTD1Q96MG8 357 aaPredicted RBP21.48■■□□□ 1.03
CNTNAP3-204ENST00000377656 CDK19Q9BWU1 502 aa21.48■■□□□ 1.03
CNTNAP3-204ENST00000377656 MAP3K1Q13233 1512 aa21.48■■□□□ 1.03
CNTNAP3-204ENST00000377656 NAIPQ13075 1403 aa21.48■■□□□ 1.03
CNTNAP3-204ENST00000377656 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.48■■□□□ 1.03
CNTNAP3-204ENST00000377656 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
CNTNAP3-204ENST00000377656 PSMA5P28066 241 aa21.47■■□□□ 1.03
CNTNAP3-204ENST00000377656 SASS6Q6UVJ0 657 aa21.47■■□□□ 1.03
CNTNAP3-204ENST00000377656 SULT6B1Q6IMI4 303 aa21.47■■□□□ 1.03
CNTNAP3-204ENST00000377656 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
CNTNAP3-204ENST00000377656 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
CNTNAP3-204ENST00000377656 PNISRQ8TF01 805 aaKnown RBP21.46■■□□□ 1.03
CNTNAP3-204ENST00000377656 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
CNTNAP3-204ENST00000377656 NESP48681 1621 aa21.45■■□□□ 1.02
CNTNAP3-204ENST00000377656 SMG6Q86US8 1419 aaKnown RBP21.45■■□□□ 1.02
CNTNAP3-204ENST00000377656 CCDC27Q2M243 656 aa21.45■■□□□ 1.02
CNTNAP3-204ENST00000377656 HDGFL1Q5TGJ6 251 aa21.45■■□□□ 1.02
CNTNAP3-204ENST00000377656 CCDC70Q6NSX1 233 aa21.45■■□□□ 1.02
CNTNAP3-204ENST00000377656 TSR2Q969E8 191 aaKnown RBP21.45■■□□□ 1.02
CNTNAP3-204ENST00000377656 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.45■■□□□ 1.02
CNTNAP3-204ENST00000377656 GCC1Q96CN9 775 aa21.44■■□□□ 1.02
CNTNAP3-204ENST00000377656 PRM3Q9NNZ6 103 aa21.44■■□□□ 1.02
CNTNAP3-204ENST00000377656 PDZRN3Q9UPQ7 1066 aa21.44■■□□□ 1.02
CNTNAP3-204ENST00000377656 TNNT3P45378 269 aaPredicted RBP21.44■■□□□ 1.02
CNTNAP3-204ENST00000377656 FOSBP53539 338 aa21.44■■□□□ 1.02
CNTNAP3-204ENST00000377656 GNAI2P04899 355 aa21.44■■□□□ 1.02
CNTNAP3-204ENST00000377656 ZNF592Q92610 1267 aa21.44■■□□□ 1.02
CNTNAP3-204ENST00000377656 TATP17735 454 aaPredicted RBP21.44■■□□□ 1.02
CNTNAP3-204ENST00000377656 TBC1D2BQ9UPU7 963 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms