RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 CFAP70Q5T0N1 1121 aa29.57■■■□□ 2.32
HLA-C-201ENST00000376228 ADGRL3Q9HAR2 1447 aa29.57■■■□□ 2.32
HLA-C-201ENST00000376228 CADPS2Q86UW7 1296 aa29.56■■■□□ 2.32
HLA-C-201ENST00000376228 MIER1Q8N108 512 aa29.56■■■□□ 2.32
HLA-C-201ENST00000376228 DDX10Q13206 875 aaKnown RBP29.55■■■□□ 2.32
HLA-C-201ENST00000376228 C14orf93Q9H972 538 aaKnown RBP29.55■■■□□ 2.32
HLA-C-201ENST00000376228 DCCP43146 1447 aa29.54■■■□□ 2.32
HLA-C-201ENST00000376228 LRPPRCP42704 1394 aaKnown RBP29.53■■■□□ 2.32
HLA-C-201ENST00000376228 YTHDC2Q9H6S0 1430 aaKnown RBP29.53■■■□□ 2.32
HLA-C-201ENST00000376228 WASHC2AQ641Q2 1341 aa29.53■■■□□ 2.32
HLA-C-201ENST00000376228 PHLPP1O60346 1717 aa29.51■■■□□ 2.32
HLA-C-201ENST00000376228 CCDC7Q96M83 1385 aa29.51■■■□□ 2.31
HLA-C-201ENST00000376228 TECPR2O15040 1411 aa29.5■■■□□ 2.31
HLA-C-201ENST00000376228 MST1RQ04912 1400 aa29.49■■■□□ 2.31
HLA-C-201ENST00000376228 WAPLQ7Z5K2 1190 aa29.48■■■□□ 2.31
HLA-C-201ENST00000376228 ABCC11Q96J66 1382 aa29.48■■■□□ 2.31
HLA-C-201ENST00000376228 NBPF1Q3BBV0 1214 aa29.47■■■□□ 2.31
HLA-C-201ENST00000376228 PLEKHH1Q9ULM0 1364 aa29.47■■■□□ 2.31
HLA-C-201ENST00000376228 ADGRB1O14514 1584 aa29.46■■■□□ 2.31
HLA-C-201ENST00000376228 C11orf95C9JLR9 678 aaPredicted RBP29.44■■■□□ 2.3
HLA-C-201ENST00000376228 DISP3Q9P2K9 1392 aa29.41■■■□□ 2.3
HLA-C-201ENST00000376228 BRINP3Q76B58 766 aa29.41■■■□□ 2.3
HLA-C-201ENST00000376228 MED1Q15648 1581 aaPredicted RBP29.41■■■□□ 2.3
HLA-C-201ENST00000376228 KIF7Q2M1P5 1343 aa29.41■■■□□ 2.3
HLA-C-201ENST00000376228 COL16A1Q07092 1604 aaPredicted RBP29.4■■■□□ 2.3
HLA-C-201ENST00000376228 CDC42BPGQ6DT37 1551 aa29.4■■■□□ 2.3
HLA-C-201ENST00000376228 AHDC1Q5TGY3 1603 aaPredicted RBP29.39■■■□□ 2.3
HLA-C-201ENST00000376228 ST20-MTHFSA0A0A6YYL1 179 aa29.38■■■□□ 2.29
HLA-C-201ENST00000376228 C1orf167Q5SNV9 1468 aa29.38■■■□□ 2.29
HLA-C-201ENST00000376228 NHSL1Q5SYE7 1610 aa29.36■■■□□ 2.29
HLA-C-201ENST00000376228 SAFB2Q14151 953 aaKnown RBP eCLIP29.35■■■□□ 2.29
HLA-C-201ENST00000376228 PRAM1Q96QH2 718 aa29.35■■■□□ 2.29
HLA-C-201ENST00000376228 TRAK1Q9UPV9 953 aa29.35■■■□□ 2.29
HLA-C-201ENST00000376228 DLC1Q96QB1 1528 aa29.34■■■□□ 2.29
HLA-C-201ENST00000376228 FMN2Q9NZ56 1722 aa29.32■■■□□ 2.28
HLA-C-201ENST00000376228 ARHGEF28Q8N1W1 1705 aaKnown RBP29.32■■■□□ 2.28
HLA-C-201ENST00000376228 DDX17Q92841 729 aaKnown RBP29.31■■■□□ 2.28
HLA-C-201ENST00000376228 SIRT1Q96EB6 747 aa29.31■■■□□ 2.28
HLA-C-201ENST00000376228 NUTM2FA1L443 756 aa29.3■■■□□ 2.28
HLA-C-201ENST00000376228 ORAI2Q96SN7 254 aa29.3■■■□□ 2.28
HLA-C-201ENST00000376228 POGKQ9P215 609 aa29.29■■■□□ 2.28
HLA-C-201ENST00000376228 RGPD8O14715 1765 aaPredicted RBP29.28■■■□□ 2.28
HLA-C-201ENST00000376228 TESK2Q96S53 571 aa29.27■■■□□ 2.28
HLA-C-201ENST00000376228 ANP32CO43423 234 aa29.25■■■□□ 2.27
HLA-C-201ENST00000376228 EIF3AQ14152 1382 aaKnown RBP29.24■■■□□ 2.27
HLA-C-201ENST00000376228 JCADQ9P266 1359 aa29.24■■■□□ 2.27
HLA-C-201ENST00000376228 SHPRHQ149N8 1683 aa29.24■■■□□ 2.27
HLA-C-201ENST00000376228 ESCO1Q5FWF5 840 aa29.23■■■□□ 2.27
HLA-C-201ENST00000376228 ADGRB2O60241 1585 aa29.22■■■□□ 2.27
HLA-C-201ENST00000376228 MINK1Q8N4C8 1332 aaPredicted RBP29.2■■■□□ 2.27
HLA-C-201ENST00000376228 CCER2I3L3R5 266 aa29.2■■■□□ 2.26
HLA-C-201ENST00000376228 SLC24A1O60721 1099 aa29.2■■■□□ 2.26
HLA-C-201ENST00000376228 USP32Q8NFA0 1604 aa29.17■■■□□ 2.26
HLA-C-201ENST00000376228 PHF23Q9BUL5 403 aaPredicted RBP29.17■■■□□ 2.26
HLA-C-201ENST00000376228 TMF1P82094 1093 aa29.15■■■□□ 2.26
HLA-C-201ENST00000376228 KIF1AQ12756 1690 aa29.14■■■□□ 2.26
HLA-C-201ENST00000376228 ILDR2Q71H61 639 aa29.14■■■□□ 2.25
HLA-C-201ENST00000376228 SBNO2Q9Y2G9 1366 aa29.13■■■□□ 2.25
HLA-C-201ENST00000376228 LRP6O75581 1613 aa29.13■■■□□ 2.25
HLA-C-201ENST00000376228 LRRC59Q96AG4 307 aaKnown RBP29.12■■■□□ 2.25
HLA-C-201ENST00000376228 FOXO3O43524 673 aa29.11■■■□□ 2.25
HLA-C-201ENST00000376228 XPCQ01831 940 aaPredicted RBP29.11■■■□□ 2.25
HLA-C-201ENST00000376228 SOS2Q07890 1332 aaPredicted RBP29.11■■■□□ 2.25
HLA-C-201ENST00000376228 SPATA31A6Q5VVP1 1343 aa29.09■■■□□ 2.25
HLA-C-201ENST00000376228 PXDNQ92626 1479 aa29.09■■■□□ 2.25
HLA-C-201ENST00000376228 QRICH2Q9H0J4 1663 aa29.08■■■□□ 2.25
HLA-C-201ENST00000376228 NPHP3Q7Z494 1330 aa29.08■■■□□ 2.25
HLA-C-201ENST00000376228 PNPLA6Q8IY17 1366 aa29.08■■■□□ 2.25
HLA-C-201ENST00000376228 CDCA8Q53HL2 280 aa29.08■■■□□ 2.25
HLA-C-201ENST00000376228 TULP4Q9NRJ4 1543 aa29.07■■■□□ 2.24
HLA-C-201ENST00000376228 NUTM2BA6NNL0 878 aaPredicted RBP29.07■■■□□ 2.24
HLA-C-201ENST00000376228 NUTM2EB1AL46 878 aaPredicted RBP29.07■■■□□ 2.24
HLA-C-201ENST00000376228 NUTM2AQ8IVF1 878 aaPredicted RBP29.07■■■□□ 2.24
HLA-C-201ENST00000376228 WASLO00401 505 aaPredicted RBP29.06■■■□□ 2.24
HLA-C-201ENST00000376228 ANKARQ7Z5J8 1434 aa29.05■■■□□ 2.24
HLA-C-201ENST00000376228 PHF8Q9UPP1 1060 aa29.04■■■□□ 2.24
HLA-C-201ENST00000376228 PRR36Q9H6K5 1346 aa29.04■■■□□ 2.24
HLA-C-201ENST00000376228 POLR3GLQ9BT43 218 aa29.03■■■□□ 2.24
HLA-C-201ENST00000376228 PRKRIP1Q9H875 184 aaPredicted RBP29.03■■■□□ 2.24
HLA-C-201ENST00000376228 PMFBP1Q8TBY8 1022 aa29.02■■■□□ 2.24
HLA-C-201ENST00000376228 RGS17Q9UGC6 210 aaPredicted RBP29.02■■■□□ 2.24
HLA-C-201ENST00000376228 ITSN1Q15811 1721 aa29.01■■■□□ 2.24
HLA-C-201ENST00000376228 MEX3CQ5U5Q3 659 aaKnown RBP29.01■■■□□ 2.23
HLA-C-201ENST00000376228 CENPJQ9HC77 1338 aaPredicted RBP29.01■■■□□ 2.23
HLA-C-201ENST00000376228 COL22A1Q8NFW1 1626 aaPredicted RBP28.99■■■□□ 2.23
HLA-C-201ENST00000376228 ATP7BP35670 1465 aa28.98■■■□□ 2.23
HLA-C-201ENST00000376228 CDK19Q9BWU1 502 aa28.98■■■□□ 2.23
HLA-C-201ENST00000376228 KRT28Q7Z3Y7 464 aa28.96■■■□□ 2.23
HLA-C-201ENST00000376228 TOPAZ1Q8N9V7 1692 aa28.96■■■□□ 2.23
HLA-C-201ENST00000376228 KTN1Q86UP2 1357 aaKnown RBP28.96■■■□□ 2.23
HLA-C-201ENST00000376228 CENPBP07199 599 aaPredicted RBP28.95■■■□□ 2.23
HLA-C-201ENST00000376228 NUDT16Q96DE0 195 aaKnown RBP28.94■■■□□ 2.22
HLA-C-201ENST00000376228 MYOM1P52179 1685 aa28.93■■■□□ 2.22
HLA-C-201ENST00000376228 PSME1Q06323 249 aa28.92■■■□□ 2.22
HLA-C-201ENST00000376228 TRPM3Q9HCF6 1732 aaPredicted RBP28.91■■■□□ 2.22
HLA-C-201ENST00000376228 PER1O15534 1290 aaPredicted RBP28.91■■■□□ 2.22
HLA-C-201ENST00000376228 PUS7Q96PZ0 661 aaKnown RBP28.91■■■□□ 2.22
HLA-C-201ENST00000376228 SPATA31A3Q5VYP0 1347 aa28.91■■■□□ 2.22
HLA-C-201ENST00000376228 ADAMTS2O95450 1211 aa28.89■■■□□ 2.22
HLA-C-201ENST00000376228 POTEAQ6S8J7 498 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms