RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 RUFY2Q8WXA3 655 aa20.93■□□□□ 0.94
MCF2L-203ENST00000375604 ZKSCAN1P17029 563 aaPredicted RBP20.92■□□□□ 0.94
MCF2L-203ENST00000375604 BICD2Q8TD16 824 aa20.92■□□□□ 0.94
MCF2L-203ENST00000375604 PRAM1Q96QH2 718 aa20.92■□□□□ 0.94
MCF2L-203ENST00000375604 MAP4K4O95819 1239 aaPredicted RBP20.91■□□□□ 0.94
MCF2L-203ENST00000375604 GOLGA6L1Q8N7Z2 621 aa20.91■□□□□ 0.94
MCF2L-203ENST00000375604 TRDNQ13061 729 aa20.9■□□□□ 0.94
MCF2L-203ENST00000375604 API5Q9BZZ5 524 aaKnown RBP20.9■□□□□ 0.94
MCF2L-203ENST00000375604 ERICH2A1L162 156 aa20.9■□□□□ 0.94
MCF2L-203ENST00000375604 PIP4K2BP78356 416 aa20.9■□□□□ 0.94
MCF2L-203ENST00000375604 MYOM3Q5VTT5 1437 aa20.9■□□□□ 0.94
MCF2L-203ENST00000375604 FGD6Q6ZV73 1430 aa20.89■□□□□ 0.94
MCF2L-203ENST00000375604 TSR1Q2NL82 804 aaKnown RBP20.89■□□□□ 0.93
MCF2L-203ENST00000375604 NBPF1Q3BBV0 1214 aa20.88■□□□□ 0.93
MCF2L-203ENST00000375604 DDX54Q8TDD1 881 aaKnown RBP20.88■□□□□ 0.93
MCF2L-203ENST00000375604 GNAI1P63096 354 aa20.88■□□□□ 0.93
MCF2L-203ENST00000375604 UBTFL1P0CB47 393 aaPredicted RBP20.87■□□□□ 0.93
MCF2L-203ENST00000375604 CCDC7Q96M83 1385 aa20.87■□□□□ 0.93
MCF2L-203ENST00000375604 TPM2P07951 284 aa20.87■□□□□ 0.93
MCF2L-203ENST00000375604 TSR2Q969E8 191 aaKnown RBP20.87■□□□□ 0.93
MCF2L-203ENST00000375604 PROSER2Q86WR7 435 aaPredicted RBP20.86■□□□□ 0.93
MCF2L-203ENST00000375604 PATL2C9JE40 543 aaKnown RBP20.86■□□□□ 0.93
MCF2L-203ENST00000375604 REC8O95072 547 aa20.86■□□□□ 0.93
MCF2L-203ENST00000375604 CHMP4CQ96CF2 233 aa20.85■□□□□ 0.93
MCF2L-203ENST00000375604 PRKAR2BP31323 418 aa20.84■□□□□ 0.93
MCF2L-203ENST00000375604 MYL6BP14649 208 aa20.84■□□□□ 0.93
MCF2L-203ENST00000375604 LRRFIP1Q32MZ4 808 aaKnown RBP20.84■□□□□ 0.93
MCF2L-203ENST00000375604 SMC3Q9UQE7 1217 aa20.84■□□□□ 0.93
MCF2L-203ENST00000375604 SIL1Q9H173 461 aa20.84■□□□□ 0.93
MCF2L-203ENST00000375604 IKQ13123 557 aaPredicted RBP20.84■□□□□ 0.93
MCF2L-203ENST00000375604 ANKRD50Q9ULJ7 1429 aa20.83■□□□□ 0.93
MCF2L-203ENST00000375604 INTS3Q68E01 1043 aaKnown RBP20.83■□□□□ 0.92
MCF2L-203ENST00000375604 RRP12Q5JTH9 1297 aaKnown RBP20.82■□□□□ 0.92
MCF2L-203ENST00000375604 NCOA2Q15596 1464 aa20.82■□□□□ 0.92
MCF2L-203ENST00000375604 CPLX2Q6PUV4 134 aaKnown RBP20.82■□□□□ 0.92
MCF2L-203ENST00000375604 SPINK5Q9NQ38 1064 aaPredicted RBP20.82■□□□□ 0.92
MCF2L-203ENST00000375604 KIF21BO75037 1637 aa20.82■□□□□ 0.92
MCF2L-203ENST00000375604 CDK19Q9BWU1 502 aa20.82■□□□□ 0.92
MCF2L-203ENST00000375604 CNKSR2Q8WXI2 1034 aa20.81■□□□□ 0.92
MCF2L-203ENST00000375604 ATP6V1DQ9Y5K8 247 aa20.81■□□□□ 0.92
MCF2L-203ENST00000375604 FSD1Q9BTV5 496 aa20.81■□□□□ 0.92
MCF2L-203ENST00000375604 EXOSC9Q06265 439 aaKnown RBP20.81■□□□□ 0.92
MCF2L-203ENST00000375604 RNF20Q5VTR2 975 aa20.81■□□□□ 0.92
MCF2L-203ENST00000375604 WASHC2AQ641Q2 1341 aa20.8■□□□□ 0.92
MCF2L-203ENST00000375604 CCDC43Q96MW1 224 aaKnown RBP20.8■□□□□ 0.92
MCF2L-203ENST00000375604 ATP2B1P20020 1258 aa20.8■□□□□ 0.92
MCF2L-203ENST00000375604 NOB1Q9ULX3 412 aaKnown RBP20.8■□□□□ 0.92
MCF2L-203ENST00000375604 NESP48681 1621 aa20.8■□□□□ 0.92
MCF2L-203ENST00000375604 MIA2Q96PC5 1412 aa20.8■□□□□ 0.92
MCF2L-203ENST00000375604 ROCK1Q13464 1354 aa20.8■□□□□ 0.92
MCF2L-203ENST00000375604 TCP11L2Q8N4U5 519 aa20.8■□□□□ 0.92
MCF2L-203ENST00000375604 SLC12A5Q9H2X9 1139 aa20.8■□□□□ 0.92
MCF2L-203ENST00000375604 KIF6Q6ZMV9 814 aa20.79■□□□□ 0.92
MCF2L-203ENST00000375604 LRRC9Q6ZRR7 1453 aa20.79■□□□□ 0.92
MCF2L-203ENST00000375604 SURF6O75683 361 aaKnown RBP20.79■□□□□ 0.92
MCF2L-203ENST00000375604 CABP1Q9NZU7 370 aa20.79■□□□□ 0.92
MCF2L-203ENST00000375604 RRS1Q15050 365 aaKnown RBP20.79■□□□□ 0.92
MCF2L-203ENST00000375604 GSE1Q14687 1217 aa20.79■□□□□ 0.92
MCF2L-203ENST00000375604 CUX1P39880 1505 aa20.79■□□□□ 0.92
MCF2L-203ENST00000375604 ERC2O15083 957 aa20.78■□□□□ 0.92
MCF2L-203ENST00000375604 C22orf23Q9BZE7 217 aa20.78■□□□□ 0.92
MCF2L-203ENST00000375604 PRG4Q92954 1404 aaPredicted RBP20.78■□□□□ 0.92
MCF2L-203ENST00000375604 TNNT3P45378 269 aaPredicted RBP20.78■□□□□ 0.92
MCF2L-203ENST00000375604 SLC26A8Q96RN1 970 aa20.78■□□□□ 0.92
MCF2L-203ENST00000375604 TPM1P09493 284 aa20.78■□□□□ 0.92
MCF2L-203ENST00000375604 RALYLQ86SE5 291 aaKnown RBP20.78■□□□□ 0.92
MCF2L-203ENST00000375604 GPRASP1Q5JY77 1395 aa20.78■□□□□ 0.92
MCF2L-203ENST00000375604 RAPGEF3O95398 923 aa20.77■□□□□ 0.92
MCF2L-203ENST00000375604 CEBPZQ03701 1054 aaKnown RBP20.77■□□□□ 0.92
MCF2L-203ENST00000375604 PPP2R1AP30153 589 aa20.77■□□□□ 0.92
MCF2L-203ENST00000375604 NAP1L1P55209 391 aaKnown RBP20.77■□□□□ 0.92
MCF2L-203ENST00000375604 BCAR3O75815 825 aa20.77■□□□□ 0.92
MCF2L-203ENST00000375604 TOM1L2Q6ZVM7 507 aa20.76■□□□□ 0.91
MCF2L-203ENST00000375604 CFTRP13569 1480 aa20.76■□□□□ 0.91
MCF2L-203ENST00000375604 CNTLNQ9NXG0 1405 aa20.76■□□□□ 0.91
MCF2L-203ENST00000375604 SULT6B1Q6IMI4 303 aa20.76■□□□□ 0.91
MCF2L-203ENST00000375604 ATP2B2Q01814 1243 aa20.76■□□□□ 0.91
MCF2L-203ENST00000375604 STK3Q13188 491 aa20.75■□□□□ 0.91
MCF2L-203ENST00000375604 TTLL5Q6EMB2 1281 aa20.75■□□□□ 0.91
MCF2L-203ENST00000375604 CNNM1Q9NRU3 951 aa20.75■□□□□ 0.91
MCF2L-203ENST00000375604 CCDC85AQ96PX6 553 aaPredicted RBP20.74■□□□□ 0.91
MCF2L-203ENST00000375604 CCDC30Q5VVM6 783 aa20.74■□□□□ 0.91
MCF2L-203ENST00000375604 TTC39AQ5SRH9 613 aa20.74■□□□□ 0.91
MCF2L-203ENST00000375604 BICDL1Q6ZP65 573 aa20.74■□□□□ 0.91
MCF2L-203ENST00000375604 HOMER1Q86YM7 354 aa20.74■□□□□ 0.91
MCF2L-203ENST00000375604 CABP4P57796 275 aa20.74■□□□□ 0.91
MCF2L-203ENST00000375604 SLC4A2P04920 1241 aa20.73■□□□□ 0.91
MCF2L-203ENST00000375604 SASS6Q6UVJ0 657 aa20.73■□□□□ 0.91
MCF2L-203ENST00000375604 TWISTNBQ3B726 338 aaPredicted RBP20.73■□□□□ 0.91
MCF2L-203ENST00000375604 CNTROBQ8N137 903 aa20.73■□□□□ 0.91
MCF2L-203ENST00000375604 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
MCF2L-203ENST00000375604 SKOR2Q2VWA4 1001 aaPredicted RBP20.72■□□□□ 0.91
MCF2L-203ENST00000375604 PDILTQ8N807 584 aa20.72■□□□□ 0.91
MCF2L-203ENST00000375604 PLEKHO1Q53GL0 409 aaPredicted RBP20.71■□□□□ 0.91
MCF2L-203ENST00000375604 CCDC47Q96A33 483 aaKnown RBP20.71■□□□□ 0.91
MCF2L-203ENST00000375604 SCAPERQ9BY12 1400 aa20.71■□□□□ 0.91
MCF2L-203ENST00000375604 RNF214Q8ND24 703 aa20.7■□□□□ 0.9
MCF2L-203ENST00000375604 CDC45O75419 566 aa20.7■□□□□ 0.9
MCF2L-203ENST00000375604 SAFBQ15424 915 aaKnown RBP eCLIP20.69■□□□□ 0.9
MCF2L-203ENST00000375604 HSP90AB4PQ58FF6 505 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms