RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 DDX54Q8TDD1 881 aaKnown RBP17.89■□□□□ 0.45
NOTCH4-201ENST00000375023 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
NOTCH4-201ENST00000375023 USP47Q96K76 1375 aa17.89■□□□□ 0.45
NOTCH4-201ENST00000375023 VGFO15240 615 aaPredicted RBP17.88■□□□□ 0.45
NOTCH4-201ENST00000375023 RUFY2Q8WXA3 655 aa17.88■□□□□ 0.45
NOTCH4-201ENST00000375023 ATP2B1P20020 1258 aa17.88■□□□□ 0.45
NOTCH4-201ENST00000375023 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
NOTCH4-201ENST00000375023 CPLX2Q6PUV4 134 aaKnown RBP17.88■□□□□ 0.45
NOTCH4-201ENST00000375023 DZIP1LQ8IYY4 767 aaKnown RBP17.88■□□□□ 0.45
NOTCH4-201ENST00000375023 ZFYVE27Q5T4F4 411 aa17.87■□□□□ 0.45
NOTCH4-201ENST00000375023 ADAMTS2O95450 1211 aa17.87■□□□□ 0.45
NOTCH4-201ENST00000375023 PROSER2Q86WR7 435 aaPredicted RBP17.87■□□□□ 0.45
NOTCH4-201ENST00000375023 FAM13BQ9NYF5 915 aa17.86■□□□□ 0.45
NOTCH4-201ENST00000375023 C1orf115Q9H7X2 142 aa17.86■□□□□ 0.45
NOTCH4-201ENST00000375023 DDX58O95786 925 aaKnown RBP17.86■□□□□ 0.45
NOTCH4-201ENST00000375023 DNAJC2Q99543 621 aaKnown RBP17.86■□□□□ 0.45
NOTCH4-201ENST00000375023 SMC3Q9UQE7 1217 aa17.86■□□□□ 0.45
NOTCH4-201ENST00000375023 R3HCC1Q9Y3T6 440 aaKnown RBP17.86■□□□□ 0.45
NOTCH4-201ENST00000375023 ATP6V1DQ9Y5K8 247 aa17.86■□□□□ 0.45
NOTCH4-201ENST00000375023 GSE1Q14687 1217 aa17.86■□□□□ 0.45
NOTCH4-201ENST00000375023 XPCQ01831 940 aaPredicted RBP17.85■□□□□ 0.45
NOTCH4-201ENST00000375023 PDILTQ8N807 584 aa17.85■□□□□ 0.45
NOTCH4-201ENST00000375023 PRKRIP1Q9H875 184 aaPredicted RBP17.85■□□□□ 0.45
NOTCH4-201ENST00000375023 CA8P35219 290 aa17.84■□□□□ 0.45
NOTCH4-201ENST00000375023 RAPGEF4Q8WZA2 1011 aa17.84■□□□□ 0.45
NOTCH4-201ENST00000375023 WIZO95785 1651 aa17.84■□□□□ 0.45
NOTCH4-201ENST00000375023 RRP12Q5JTH9 1297 aaKnown RBP17.84■□□□□ 0.45
NOTCH4-201ENST00000375023 CCDC70Q6NSX1 233 aa17.84■□□□□ 0.45
NOTCH4-201ENST00000375023 PHLDB1Q86UU1 1377 aa17.83■□□□□ 0.45
NOTCH4-201ENST00000375023 CT47A1Q5JQC4 288 aaPredicted RBP17.83■□□□□ 0.45
NOTCH4-201ENST00000375023 DDX19BQ9UMR2 479 aa17.83■□□□□ 0.45
NOTCH4-201ENST00000375023 RAPGEF2Q9Y4G8 1499 aa17.83■□□□□ 0.44
NOTCH4-201ENST00000375023 REC8O95072 547 aa17.83■□□□□ 0.44
NOTCH4-201ENST00000375023 IPO7O95373 1038 aaKnown RBP17.83■□□□□ 0.44
NOTCH4-201ENST00000375023 CEBPZQ03701 1054 aaKnown RBP17.83■□□□□ 0.44
NOTCH4-201ENST00000375023 MAP4K4O95819 1239 aaPredicted RBP17.83■□□□□ 0.44
NOTCH4-201ENST00000375023 SETQ01105 290 aaPredicted RBP17.83■□□□□ 0.44
NOTCH4-201ENST00000375023 CCDC47Q96A33 483 aaKnown RBP17.82■□□□□ 0.44
NOTCH4-201ENST00000375023 LRRFIP1Q32MZ4 808 aaKnown RBP17.82■□□□□ 0.44
NOTCH4-201ENST00000375023 SASS6Q6UVJ0 657 aa17.82■□□□□ 0.44
NOTCH4-201ENST00000375023 RNF214Q8ND24 703 aa17.82■□□□□ 0.44
NOTCH4-201ENST00000375023 WWC2Q6AWC2 1192 aa17.81■□□□□ 0.44
NOTCH4-201ENST00000375023 IFT57Q9NWB7 429 aa17.81■□□□□ 0.44
NOTCH4-201ENST00000375023 ZNF644Q9H582 1327 aaPredicted RBP17.8■□□□□ 0.44
NOTCH4-201ENST00000375023 ANKRD20A12PQ8NF67 263 aa17.8■□□□□ 0.44
NOTCH4-201ENST00000375023 RALYLQ86SE5 291 aaKnown RBP17.8■□□□□ 0.44
NOTCH4-201ENST00000375023 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
NOTCH4-201ENST00000375023 RNF20Q5VTR2 975 aa17.8■□□□□ 0.44
NOTCH4-201ENST00000375023 C16orf71Q8IYS4 520 aaPredicted RBP17.79■□□□□ 0.44
NOTCH4-201ENST00000375023 EPS15P42566 896 aa17.79■□□□□ 0.44
NOTCH4-201ENST00000375023 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
NOTCH4-201ENST00000375023 ODF2Q5BJF6 829 aa17.79■□□□□ 0.44
NOTCH4-201ENST00000375023 TMEM87AQ8NBN3 555 aa17.79■□□□□ 0.44
NOTCH4-201ENST00000375023 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
NOTCH4-201ENST00000375023 NLRP6P59044 892 aa17.78■□□□□ 0.44
NOTCH4-201ENST00000375023 DHX37Q8IY37 1157 aaKnown RBP17.78■□□□□ 0.44
NOTCH4-201ENST00000375023 FMNL2Q96PY5 1086 aa17.77■□□□□ 0.44
NOTCH4-201ENST00000375023 INTS3Q68E01 1043 aaKnown RBP17.77■□□□□ 0.44
NOTCH4-201ENST00000375023 MPNDQ8N594 471 aa17.77■□□□□ 0.43
NOTCH4-201ENST00000375023 UBTFL1P0CB47 393 aaPredicted RBP17.77■□□□□ 0.43
NOTCH4-201ENST00000375023 RUNDC1Q96C34 613 aa17.77■□□□□ 0.43
NOTCH4-201ENST00000375023 SPINK5Q9NQ38 1064 aaPredicted RBP17.77■□□□□ 0.43
NOTCH4-201ENST00000375023 SKOR2Q2VWA4 1001 aaPredicted RBP17.76■□□□□ 0.43
NOTCH4-201ENST00000375023 WDR78Q5VTH9 848 aa17.76■□□□□ 0.43
NOTCH4-201ENST00000375023 FSD1Q9BTV5 496 aa17.76■□□□□ 0.43
NOTCH4-201ENST00000375023 API5Q9BZZ5 524 aaKnown RBP17.76■□□□□ 0.43
NOTCH4-201ENST00000375023 SIL1Q9H173 461 aa17.76■□□□□ 0.43
NOTCH4-201ENST00000375023 SAFBQ15424 915 aaKnown RBP eCLIP17.76■□□□□ 0.43
NOTCH4-201ENST00000375023 HSP90AB2PQ58FF8 381 aa17.76■□□□□ 0.43
NOTCH4-201ENST00000375023 ABTB2Q8N961 1025 aa17.75■□□□□ 0.43
NOTCH4-201ENST00000375023 UACAQ9BZF9 1416 aa17.75■□□□□ 0.43
NOTCH4-201ENST00000375023 STK3Q13188 491 aa17.75■□□□□ 0.43
NOTCH4-201ENST00000375023 HOOK1Q9UJC3 728 aaKnown RBP17.75■□□□□ 0.43
NOTCH4-201ENST00000375023 ZSCAN29Q8IWY8 852 aaPredicted RBP17.75■□□□□ 0.43
NOTCH4-201ENST00000375023 RUSC2Q8N2Y8 1516 aa17.75■□□□□ 0.43
NOTCH4-201ENST00000375023 TOM1L2Q6ZVM7 507 aa17.74■□□□□ 0.43
NOTCH4-201ENST00000375023 C22orf23Q9BZE7 217 aa17.74■□□□□ 0.43
NOTCH4-201ENST00000375023 GPS2Q13227 327 aa17.74■□□□□ 0.43
NOTCH4-201ENST00000375023 RSPH4AQ5TD94 716 aa17.73■□□□□ 0.43
NOTCH4-201ENST00000375023 CCDC73Q6ZRK6 1079 aa17.73■□□□□ 0.43
NOTCH4-201ENST00000375023 DHX57Q6P158 1386 aaKnown RBP17.73■□□□□ 0.43
NOTCH4-201ENST00000375023 ERC2O15083 957 aa17.72■□□□□ 0.43
NOTCH4-201ENST00000375023 CDCA7LQ96GN5 454 aa17.72■□□□□ 0.43
NOTCH4-201ENST00000375023 TTC16Q8NEE8 873 aa17.72■□□□□ 0.43
NOTCH4-201ENST00000375023 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
NOTCH4-201ENST00000375023 SURF6O75683 361 aaKnown RBP17.72■□□□□ 0.43
NOTCH4-201ENST00000375023 CCDC97Q96F63 343 aaPredicted RBP17.72■□□□□ 0.43
NOTCH4-201ENST00000375023 PTPRGP23470 1445 aa17.72■□□□□ 0.43
NOTCH4-201ENST00000375023 RUFY1Q96T51 708 aa17.72■□□□□ 0.43
NOTCH4-201ENST00000375023 CLEC11AQ9Y240 323 aa17.71■□□□□ 0.43
NOTCH4-201ENST00000375023 MYL6BP14649 208 aa17.71■□□□□ 0.43
NOTCH4-201ENST00000375023 CAGE1Q8TC20 777 aa17.71■□□□□ 0.43
NOTCH4-201ENST00000375023 OFD1O75665 1012 aa17.71■□□□□ 0.43
NOTCH4-201ENST00000375023 PIBF1Q8WXW3 757 aa17.71■□□□□ 0.42
NOTCH4-201ENST00000375023 MPHOSPH10O00566 681 aaKnown RBP17.7■□□□□ 0.42
NOTCH4-201ENST00000375023 MTHFSP49914 203 aa17.7■□□□□ 0.42
NOTCH4-201ENST00000375023 SDF4Q9BRK5 362 aa17.7■□□□□ 0.42
NOTCH4-201ENST00000375023 CHMP5Q9NZZ3 219 aa17.7■□□□□ 0.42
NOTCH4-201ENST00000375023 GNAI1P63096 354 aa17.69■□□□□ 0.42
NOTCH4-201ENST00000375023 SMC2O95347 1197 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms