RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 BRINP3Q76B58 766 aa26.26■■□□□ 1.79
PBX3-205ENST00000373492 TIMELESSQ9UNS1 1208 aa26.26■■□□□ 1.79
PBX3-205ENST00000373492 PLEKHH1Q9ULM0 1364 aa26.25■■□□□ 1.79
PBX3-205ENST00000373492 DLC1Q96QB1 1528 aa26.24■■□□□ 1.79
PBX3-205ENST00000373492 ARHGEF28Q8N1W1 1705 aaKnown RBP26.24■■□□□ 1.79
PBX3-205ENST00000373492 CDC42BPGQ6DT37 1551 aa26.22■■□□□ 1.79
PBX3-205ENST00000373492 C1orf167Q5SNV9 1468 aa26.22■■□□□ 1.79
PBX3-205ENST00000373492 PRAM1Q96QH2 718 aa26.21■■□□□ 1.79
PBX3-205ENST00000373492 POGKQ9P215 609 aa26.2■■□□□ 1.78
PBX3-205ENST00000373492 TRAK1Q9UPV9 953 aa26.2■■□□□ 1.78
PBX3-205ENST00000373492 AHDC1Q5TGY3 1603 aaPredicted RBP26.2■■□□□ 1.78
PBX3-205ENST00000373492 PHLPP1O60346 1717 aa26.19■■□□□ 1.78
PBX3-205ENST00000373492 NBPF1Q3BBV0 1214 aa26.16■■□□□ 1.78
PBX3-205ENST00000373492 NBPF8Q3BBV2 869 aa26.16■■□□□ 1.78
PBX3-205ENST00000373492 ROCK2O75116 1388 aaKnown RBP26.15■■□□□ 1.78
PBX3-205ENST00000373492 DISP3Q9P2K9 1392 aa26.15■■□□□ 1.78
PBX3-205ENST00000373492 COL16A1Q07092 1604 aaPredicted RBP26.14■■□□□ 1.78
PBX3-205ENST00000373492 RALGAPBQ86X10 1494 aa26.13■■□□□ 1.77
PBX3-205ENST00000373492 JCADQ9P266 1359 aa26.13■■□□□ 1.77
PBX3-205ENST00000373492 SAFB2Q14151 953 aaKnown RBP eCLIP26.13■■□□□ 1.77
PBX3-205ENST00000373492 ORAI2Q96SN7 254 aa26.13■■□□□ 1.77
PBX3-205ENST00000373492 MED1Q15648 1581 aaPredicted RBP26.11■■□□□ 1.77
PBX3-205ENST00000373492 NHSL1Q5SYE7 1610 aa26.1■■□□□ 1.77
PBX3-205ENST00000373492 ESCO1Q5FWF5 840 aa26.1■■□□□ 1.77
PBX3-205ENST00000373492 QRICH2Q9H0J4 1663 aa26.09■■□□□ 1.77
PBX3-205ENST00000373492 FMN2Q9NZ56 1722 aa26.08■■□□□ 1.76
PBX3-205ENST00000373492 LRRC59Q96AG4 307 aaKnown RBP26.07■■□□□ 1.76
PBX3-205ENST00000373492 ADGRB2O60241 1585 aa26.07■■□□□ 1.76
PBX3-205ENST00000373492 GPRASP1Q5JY77 1395 aa26.07■■□□□ 1.76
PBX3-205ENST00000373492 NUTM2FA1L443 756 aa26.06■■□□□ 1.76
PBX3-205ENST00000373492 DDX17Q92841 729 aaKnown RBP26.06■■□□□ 1.76
PBX3-205ENST00000373492 MINK1Q8N4C8 1332 aaPredicted RBP26.05■■□□□ 1.76
PBX3-205ENST00000373492 CARD11Q9BXL7 1154 aa26.04■■□□□ 1.76
PBX3-205ENST00000373492 RGPD8O14715 1765 aaPredicted RBP26.04■■□□□ 1.76
PBX3-205ENST00000373492 SOS2Q07890 1332 aaPredicted RBP26.03■■□□□ 1.76
PBX3-205ENST00000373492 SPATA31A6Q5VVP1 1343 aa26.03■■□□□ 1.76
PBX3-205ENST00000373492 NPHP3Q7Z494 1330 aa26.03■■□□□ 1.76
PBX3-205ENST00000373492 EIF3AQ14152 1382 aaKnown RBP26.03■■□□□ 1.76
PBX3-205ENST00000373492 HIRIP3Q9BW71 556 aaPredicted RBP26.02■■□□□ 1.76
PBX3-205ENST00000373492 ANKARQ7Z5J8 1434 aa26.02■■□□□ 1.76
PBX3-205ENST00000373492 WASLO00401 505 aaPredicted RBP26.01■■□□□ 1.75
PBX3-205ENST00000373492 SHPRHQ149N8 1683 aa25.99■■□□□ 1.75
PBX3-205ENST00000373492 FOXO3O43524 673 aa25.99■■□□□ 1.75
PBX3-205ENST00000373492 PHF23Q9BUL5 403 aaPredicted RBP25.99■■□□□ 1.75
PBX3-205ENST00000373492 CENPJQ9HC77 1338 aaPredicted RBP25.97■■□□□ 1.75
PBX3-205ENST00000373492 PHF8Q9UPP1 1060 aa25.97■■□□□ 1.75
PBX3-205ENST00000373492 KIF1AQ12756 1690 aa25.96■■□□□ 1.75
PBX3-205ENST00000373492 ITSN1Q15811 1721 aa25.94■■□□□ 1.74
PBX3-205ENST00000373492 TULP4Q9NRJ4 1543 aa25.94■■□□□ 1.74
PBX3-205ENST00000373492 PXDNQ92626 1479 aa25.94■■□□□ 1.74
PBX3-205ENST00000373492 PNPLA6Q8IY17 1366 aa25.94■■□□□ 1.74
PBX3-205ENST00000373492 USP32Q8NFA0 1604 aa25.92■■□□□ 1.74
PBX3-205ENST00000373492 CDK19Q9BWU1 502 aa25.91■■□□□ 1.74
PBX3-205ENST00000373492 PRR36Q9H6K5 1346 aa25.9■■□□□ 1.74
PBX3-205ENST00000373492 LRP6O75581 1613 aa25.89■■□□□ 1.74
PBX3-205ENST00000373492 XPCQ01831 940 aaPredicted RBP25.89■■□□□ 1.74
PBX3-205ENST00000373492 PSME1Q06323 249 aa25.88■■□□□ 1.73
PBX3-205ENST00000373492 KRT28Q7Z3Y7 464 aa25.88■■□□□ 1.73
PBX3-205ENST00000373492 NUDT16Q96DE0 195 aaKnown RBP25.88■■□□□ 1.73
PBX3-205ENST00000373492 NUTM2BA6NNL0 878 aaPredicted RBP25.87■■□□□ 1.73
PBX3-205ENST00000373492 NUTM2EB1AL46 878 aaPredicted RBP25.87■■□□□ 1.73
PBX3-205ENST00000373492 MEX3CQ5U5Q3 659 aaKnown RBP25.87■■□□□ 1.73
PBX3-205ENST00000373492 NUTM2AQ8IVF1 878 aaPredicted RBP25.87■■□□□ 1.73
PBX3-205ENST00000373492 PMFBP1Q8TBY8 1022 aa25.87■■□□□ 1.73
PBX3-205ENST00000373492 ILDR2Q71H61 639 aa25.86■■□□□ 1.73
PBX3-205ENST00000373492 USP47Q96K76 1375 aa25.85■■□□□ 1.73
PBX3-205ENST00000373492 RGS17Q9UGC6 210 aaPredicted RBP25.85■■□□□ 1.73
PBX3-205ENST00000373492 ATP7BP35670 1465 aa25.85■■□□□ 1.73
PBX3-205ENST00000373492 SPATA31A3Q5VYP0 1347 aa25.84■■□□□ 1.73
PBX3-205ENST00000373492 SBNO2Q9Y2G9 1366 aa25.83■■□□□ 1.73
PBX3-205ENST00000373492 CCDC61Q9Y6R9 512 aa25.83■■□□□ 1.73
PBX3-205ENST00000373492 TOPAZ1Q8N9V7 1692 aa25.83■■□□□ 1.73
PBX3-205ENST00000373492 SBNO1A3KN83 1393 aa25.82■■□□□ 1.72
PBX3-205ENST00000373492 COL22A1Q8NFW1 1626 aaPredicted RBP25.82■■□□□ 1.72
PBX3-205ENST00000373492 EVC2Q86UK5 1308 aa25.82■■□□□ 1.72
PBX3-205ENST00000373492 SRPK2P78362 688 aaKnown RBP25.81■■□□□ 1.72
PBX3-205ENST00000373492 NGDNQ8NEJ9 315 aaKnown RBP25.81■■□□□ 1.72
PBX3-205ENST00000373492 ST20-MTHFSA0A0A6YYL1 179 aa25.79■■□□□ 1.72
PBX3-205ENST00000373492 TNS3Q68CZ2 1445 aa25.79■■□□□ 1.72
PBX3-205ENST00000373492 PLEKHG3A1L390 1219 aa25.78■■□□□ 1.72
PBX3-205ENST00000373492 SLC24A1O60721 1099 aa25.78■■□□□ 1.72
PBX3-205ENST00000373492 CABP2Q9NPB3 220 aa25.78■■□□□ 1.72
PBX3-205ENST00000373492 ZNF772Q68DY9 489 aaPredicted RBP25.76■■□□□ 1.71
PBX3-205ENST00000373492 ARHGEF10O15013 1369 aa25.76■■□□□ 1.71
PBX3-205ENST00000373492 POLR3AO14802 1390 aaPredicted RBP25.75■■□□□ 1.71
PBX3-205ENST00000373492 ADAMTS2O95450 1211 aa25.74■■□□□ 1.71
PBX3-205ENST00000373492 EIF4G2P78344 907 aaKnown RBP eCLIP25.74■■□□□ 1.71
PBX3-205ENST00000373492 POTEAQ6S8J7 498 aa25.73■■□□□ 1.71
PBX3-205ENST00000373492 ACEP12821 1306 aa25.72■■□□□ 1.71
PBX3-205ENST00000373492 C8orf37Q96NL8 207 aa25.72■■□□□ 1.71
PBX3-205ENST00000373492 PPIP5K1Q6PFW1 1433 aa25.71■■□□□ 1.71
PBX3-205ENST00000373492 LMOD2Q6P5Q4 547 aa25.71■■□□□ 1.71
PBX3-205ENST00000373492 AFF2P51816 1311 aa25.7■■□□□ 1.71
PBX3-205ENST00000373492 TESK2Q96S53 571 aa25.7■■□□□ 1.7
PBX3-205ENST00000373492 TRPM3Q9HCF6 1732 aaPredicted RBP25.7■■□□□ 1.7
PBX3-205ENST00000373492 NGLY1Q96IV0 654 aa25.69■■□□□ 1.7
PBX3-205ENST00000373492 AKAP12Q02952 1782 aa25.68■■□□□ 1.7
PBX3-205ENST00000373492 ATAD2Q6PL18 1390 aa25.68■■□□□ 1.7
PBX3-205ENST00000373492 PAK3O75914 559 aaPredicted RBP25.67■■□□□ 1.7
PBX3-205ENST00000373492 TMF1P82094 1093 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms