RNA–Protein interactions for RNA: ENST00000369487.3

CD58-201, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 892 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-201ENST00000369487 MST1RQ04912 1400 aa29.7■■■□□ 2.34
CD58-201ENST00000369487 PRAM1Q96QH2 718 aa29.69■■■□□ 2.34
CD58-201ENST00000369487 HSPA1LP34931 641 aa29.68■■■□□ 2.34
CD58-201ENST00000369487 POGKQ9P215 609 aa29.68■■■□□ 2.34
CD58-201ENST00000369487 TRPM1Q7Z4N2 1603 aa29.67■■■□□ 2.34
CD58-201ENST00000369487 NBPF1Q3BBV0 1214 aa29.66■■■□□ 2.34
CD58-201ENST00000369487 CCER1Q8TC90 406 aaPredicted RBP29.65■■■□□ 2.34
CD58-201ENST00000369487 ARHGEF28Q8N1W1 1705 aaKnown RBP29.64■■■□□ 2.34
CD58-201ENST00000369487 C1orf167Q5SNV9 1468 aa29.61■■■□□ 2.33
CD58-201ENST00000369487 SAFB2Q14151 953 aaKnown RBP eCLIP29.61■■■□□ 2.332e-6■■■□□ 14.6
CD58-201ENST00000369487 BRINP3Q76B58 766 aa29.6■■■□□ 2.33
CD58-201ENST00000369487 ROCK2O75116 1388 aaKnown RBP29.6■■■□□ 2.33
CD58-201ENST00000369487 NBPF8Q3BBV2 869 aa29.59■■■□□ 2.33
CD58-201ENST00000369487 TIMELESSQ9UNS1 1208 aa29.59■■■□□ 2.33
CD58-201ENST00000369487 ADGRB2O60241 1585 aa29.59■■■□□ 2.33
CD58-201ENST00000369487 FMN2Q9NZ56 1722 aa29.56■■■□□ 2.32
CD58-201ENST00000369487 AHDC1Q5TGY3 1603 aaPredicted RBP29.55■■■□□ 2.32
CD58-201ENST00000369487 RALGAPBQ86X10 1494 aa29.55■■■□□ 2.32
CD58-201ENST00000369487 GPRASP1Q5JY77 1395 aa29.54■■■□□ 2.32
CD58-201ENST00000369487 PHLPP1O60346 1717 aa29.54■■■□□ 2.32
CD58-201ENST00000369487 MINK1Q8N4C8 1332 aaPredicted RBP29.52■■■□□ 2.32
CD58-201ENST00000369487 EIF3AQ14152 1382 aaKnown RBP29.5■■■□□ 2.31
CD58-201ENST00000369487 NHSL1Q5SYE7 1610 aa29.49■■■□□ 2.31
CD58-201ENST00000369487 HIRIP3Q9BW71 556 aaPredicted RBP29.49■■■□□ 2.31
CD58-201ENST00000369487 CENPJQ9HC77 1338 aaPredicted RBP29.48■■■□□ 2.31
CD58-201ENST00000369487 ORAI2Q96SN7 254 aa29.48■■■□□ 2.31
CD58-201ENST00000369487 COL16A1Q07092 1604 aaPredicted RBP29.47■■■□□ 2.31
CD58-201ENST00000369487 NUTM2FA1L443 756 aa29.47■■■□□ 2.31
CD58-201ENST00000369487 ESCO1Q5FWF5 840 aa29.47■■■□□ 2.31
CD58-201ENST00000369487 ANKARQ7Z5J8 1434 aa29.46■■■□□ 2.31
CD58-201ENST00000369487 CARD11Q9BXL7 1154 aa29.46■■■□□ 2.31
CD58-201ENST00000369487 WASLO00401 505 aaPredicted RBP29.45■■■□□ 2.31
CD58-201ENST00000369487 TULP4Q9NRJ4 1543 aa29.43■■■□□ 2.3
CD58-201ENST00000369487 KIF1AQ12756 1690 aa29.42■■■□□ 2.3
CD58-201ENST00000369487 QRICH2Q9H0J4 1663 aa29.42■■■□□ 2.3
CD58-201ENST00000369487 JCADQ9P266 1359 aa29.4■■■□□ 2.3
CD58-201ENST00000369487 USP32Q8NFA0 1604 aa29.39■■■□□ 2.3
CD58-201ENST00000369487 NPHP3Q7Z494 1330 aa29.39■■■□□ 2.3
CD58-201ENST00000369487 RGPD8O14715 1765 aaPredicted RBP29.37■■■□□ 2.29
CD58-201ENST00000369487 DDX17Q92841 729 aaKnown RBP29.37■■■□□ 2.29
CD58-201ENST00000369487 PHF8Q9UPP1 1060 aa29.36■■■□□ 2.29
CD58-201ENST00000369487 LRRC59Q96AG4 307 aaKnown RBP29.35■■■□□ 2.29
CD58-201ENST00000369487 CDK19Q9BWU1 502 aa29.35■■■□□ 2.29
CD58-201ENST00000369487 SOS2Q07890 1332 aaPredicted RBP29.35■■■□□ 2.29
CD58-201ENST00000369487 FOXO3O43524 673 aa29.33■■■□□ 2.29
CD58-201ENST00000369487 PRR36Q9H6K5 1346 aa29.33■■■□□ 2.29
CD58-201ENST00000369487 ATP7BP35670 1465 aa29.33■■■□□ 2.29
CD58-201ENST00000369487 SHPRHQ149N8 1683 aa29.32■■■□□ 2.28
CD58-201ENST00000369487 ITSN1Q15811 1721 aa29.31■■■□□ 2.28
CD58-201ENST00000369487 SBNO2Q9Y2G9 1366 aa29.31■■■□□ 2.28
CD58-201ENST00000369487 PXDNQ92626 1479 aa29.3■■■□□ 2.28
CD58-201ENST00000369487 NUDT16Q96DE0 195 aaKnown RBP29.3■■■□□ 2.28
CD58-201ENST00000369487 MED1Q15648 1581 aaPredicted RBP29.3■■■□□ 2.28
CD58-201ENST00000369487 EVC2Q86UK5 1308 aa29.29■■■□□ 2.28
CD58-201ENST00000369487 SPATA31A6Q5VVP1 1343 aa29.28■■■□□ 2.28
CD58-201ENST00000369487 SRPK2P78362 688 aaKnown RBP29.28■■■□□ 2.28
CD58-201ENST00000369487 PMFBP1Q8TBY8 1022 aa29.26■■■□□ 2.27
CD58-201ENST00000369487 TOPAZ1Q8N9V7 1692 aa29.25■■■□□ 2.27
CD58-201ENST00000369487 CCDC61Q9Y6R9 512 aa29.25■■■□□ 2.27
CD58-201ENST00000369487 PNPLA6Q8IY17 1366 aa29.24■■■□□ 2.27
CD58-201ENST00000369487 XPCQ01831 940 aaPredicted RBP29.23■■■□□ 2.27
CD58-201ENST00000369487 PSME1Q06323 249 aa29.23■■■□□ 2.27
CD58-201ENST00000369487 KRT28Q7Z3Y7 464 aa29.23■■■□□ 2.27
CD58-201ENST00000369487 CABP2Q9NPB3 220 aa29.22■■■□□ 2.27
CD58-201ENST00000369487 USP47Q96K76 1375 aa29.22■■■□□ 2.27
CD58-201ENST00000369487 NGDNQ8NEJ9 315 aaKnown RBP29.21■■■□□ 2.27
CD58-201ENST00000369487 SLC24A1O60721 1099 aa29.2■■■□□ 2.26
CD58-201ENST00000369487 DISP3Q9P2K9 1392 aa29.19■■■□□ 2.26
CD58-201ENST00000369487 SBNO1A3KN83 1393 aa29.18■■■□□ 2.26
CD58-201ENST00000369487 ST20-MTHFSA0A0A6YYL1 179 aa29.18■■■□□ 2.26
CD58-201ENST00000369487 PPIP5K1Q6PFW1 1433 aa29.18■■■□□ 2.26
CD58-201ENST00000369487 PLEKHG3A1L390 1219 aa29.17■■■□□ 2.26
CD58-201ENST00000369487 SPATA31A3Q5VYP0 1347 aa29.17■■■□□ 2.26
CD58-201ENST00000369487 COL22A1Q8NFW1 1626 aaPredicted RBP29.16■■■□□ 2.26
CD58-201ENST00000369487 TNS3Q68CZ2 1445 aa29.16■■■□□ 2.26
CD58-201ENST00000369487 POLR3AO14802 1390 aaPredicted RBP29.15■■■□□ 2.26
CD58-201ENST00000369487 ATAD2Q6PL18 1390 aa29.15■■■□□ 2.26
CD58-201ENST00000369487 LRP6O75581 1613 aa29.14■■■□□ 2.26
CD58-201ENST00000369487 TESK2Q96S53 571 aa29.13■■■□□ 2.25
CD58-201ENST00000369487 PHF23Q9BUL5 403 aaPredicted RBP29.13■■■□□ 2.25
CD58-201ENST00000369487 ACEP12821 1306 aa29.13■■■□□ 2.25
CD58-201ENST00000369487 ARHGEF10O15013 1369 aa29.12■■■□□ 2.25
CD58-201ENST00000369487 TRPM3Q9HCF6 1732 aaPredicted RBP29.11■■■□□ 2.25
CD58-201ENST00000369487 NUTM2BA6NNL0 878 aaPredicted RBP29.1■■■□□ 2.25
CD58-201ENST00000369487 NUTM2EB1AL46 878 aaPredicted RBP29.1■■■□□ 2.25
CD58-201ENST00000369487 NUTM2AQ8IVF1 878 aaPredicted RBP29.1■■■□□ 2.25
CD58-201ENST00000369487 MEX3CQ5U5Q3 659 aaKnown RBP29.09■■■□□ 2.25
CD58-201ENST00000369487 PUS7Q96PZ0 661 aaKnown RBP29.09■■■□□ 2.25
CD58-201ENST00000369487 CABP1Q9NZU7 370 aa29.09■■■□□ 2.25
CD58-201ENST00000369487 BRD4O60885 1362 aaPredicted RBP29.05■■■□□ 2.24
CD58-201ENST00000369487 LMOD2Q6P5Q4 547 aa29.05■■■□□ 2.24
CD58-201ENST00000369487 ALS2Q96Q42 1657 aa29.05■■■□□ 2.24
CD58-201ENST00000369487 PAK3O75914 559 aaPredicted RBP29.04■■■□□ 2.24
CD58-201ENST00000369487 TMF1P82094 1093 aa29.04■■■□□ 2.24
CD58-201ENST00000369487 EIF4G2P78344 907 aaKnown RBP eCLIP29.01■■■□□ 2.23
CD58-201ENST00000369487 ZNF692Q9BU19 519 aaPredicted RBP29■■■□□ 2.23
CD58-201ENST00000369487 USP6P35125 1406 aa29■■■□□ 2.23
CD58-201ENST00000369487 CDCA8Q53HL2 280 aa28.99■■■□□ 2.23
CD58-201ENST00000369487 NINLQ9Y2I6 1382 aa28.99■■■□□ 2.23
CD58-201ENST00000369487 ADAMTS2O95450 1211 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms