RNA–Protein interactions for RNA: ENST00000364295.1

RNU6-1229P-201, Transcript of RNA, U6 small nuclear 1229, pseudogene, humanhuman

BASIC

Gene RNU6-1229P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1229P-201ENST00000364295 PODNQ7Z5L7 613 aa3.55□□□□□ -1.84
RNU6-1229P-201ENST00000364295 SEMA6BQ9H3T3 888 aa3.55□□□□□ -1.84
RNU6-1229P-201ENST00000364295 FCF1Q9Y324 198 aaKnown RBP3.55□□□□□ -1.84
RNU6-1229P-201ENST00000364295 CNTNAP5Q8WYK1 1306 aa3.54□□□□□ -1.84
RNU6-1229P-201ENST00000364295 SWT1Q5T5J6 900 aaKnown RBP3.54□□□□□ -1.84
RNU6-1229P-201ENST00000364295 GPR161Q8N6U8 529 aaKnown RBP3.54□□□□□ -1.84
RNU6-1229P-201ENST00000364295 PAX4O43316 350 aa3.53□□□□□ -1.84
RNU6-1229P-201ENST00000364295 ITGB7P26010 798 aa3.53□□□□□ -1.84
RNU6-1229P-201ENST00000364295 EPAS1Q99814 870 aa3.53□□□□□ -1.84
RNU6-1229P-201ENST00000364295 TAOK2Q9UL54 1235 aa3.53□□□□□ -1.84
RNU6-1229P-201ENST00000364295 STK25O00506 426 aa3.52□□□□□ -1.85
RNU6-1229P-201ENST00000364295 ARTNQ5T4W7 220 aa3.52□□□□□ -1.85
RNU6-1229P-201ENST00000364295 BEND7Q8N7W2 519 aaPredicted RBP3.52□□□□□ -1.85
RNU6-1229P-201ENST00000364295 CDCA7LQ96GN5 454 aa3.52□□□□□ -1.85
RNU6-1229P-201ENST00000364295 NR1I2O75469 434 aa3.51□□□□□ -1.85
RNU6-1229P-201ENST00000364295 SCARF1Q14162 830 aa3.51□□□□□ -1.85
RNU6-1229P-201ENST00000364295 REPIN1Q9BWE0 567 aaKnown RBP3.51□□□□□ -1.85
RNU6-1229P-201ENST00000364295 ENAMQ9NRM1 1142 aa3.51□□□□□ -1.85
RNU6-1229P-201ENST00000364295 C3orf80F5H4A9 247 aa3.5□□□□□ -1.85
RNU6-1229P-201ENST00000364295 MAN1A2O60476 641 aa3.5□□□□□ -1.85
RNU6-1229P-201ENST00000364295 ALDH1A1P00352 501 aa3.5□□□□□ -1.85
RNU6-1229P-201ENST00000364295 RNFT1Q5M7Z0 435 aa3.49□□□□□ -1.85
RNU6-1229P-201ENST00000364295 NUDT18Q6ZVK8 323 aa3.49□□□□□ -1.85
RNU6-1229P-201ENST00000364295 FAM198AQ9UFP1 575 aa3.49□□□□□ -1.85
RNU6-1229P-201ENST00000364295 PRSS12P56730 875 aa3.48□□□□□ -1.85
RNU6-1229P-201ENST00000364295 MCTP1Q6DN14 999 aa3.48□□□□□ -1.85
RNU6-1229P-201ENST00000364295 PURBQ96QR8 312 aaKnown RBP3.48□□□□□ -1.85
RNU6-1229P-201ENST00000364295 KRBA1A5PL33 1030 aa3.47□□□□□ -1.85
RNU6-1229P-201ENST00000364295 FOXD4L6Q3SYB3 417 aaPredicted RBP3.47□□□□□ -1.85
RNU6-1229P-201ENST00000364295 KMT5BQ4FZB7 885 aa3.47□□□□□ -1.85
RNU6-1229P-201ENST00000364295 LYPD4Q6UWN0 246 aa3.47□□□□□ -1.85
RNU6-1229P-201ENST00000364295 FOXD4L3Q6VB84 417 aaPredicted RBP3.47□□□□□ -1.85
RNU6-1229P-201ENST00000364295 SPSB2Q99619 263 aa3.47□□□□□ -1.85
RNU6-1229P-201ENST00000364295 MAP3K7O43318 606 aa3.46□□□□□ -1.86
RNU6-1229P-201ENST00000364295 ACTN4O43707 911 aaKnown RBP3.45□□□□□ -1.86
RNU6-1229P-201ENST00000364295 TRIM32Q13049 653 aa3.45□□□□□ -1.86
RNU6-1229P-201ENST00000364295 TSR1Q2NL82 804 aaKnown RBP3.45□□□□□ -1.86
RNU6-1229P-201ENST00000364295 MRPL14Q6P1L8 145 aaKnown RBP3.45□□□□□ -1.86
RNU6-1229P-201ENST00000364295 CCER1Q8TC90 406 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1229P-201ENST00000364295 WASF2Q9Y6W5 498 aa3.45□□□□□ -1.86
RNU6-1229P-201ENST00000364295 ADAMTS2O95450 1211 aa3.44□□□□□ -1.86
RNU6-1229P-201ENST00000364295 NEDD1Q8NHV4 660 aa3.44□□□□□ -1.86
RNU6-1229P-201ENST00000364295 CELA2BP08218 269 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1229P-201ENST00000364295 SCUBE3Q8IX30 993 aa3.42□□□□□ -1.86
RNU6-1229P-201ENST00000364295 CRISPLD2Q9H0B8 497 aa3.42□□□□□ -1.86
RNU6-1229P-201ENST00000364295 DOC2BQ14184 412 aa3.41□□□□□ -1.86
RNU6-1229P-201ENST00000364295 RC3H1Q5TC82 1133 aaKnown RBP3.41□□□□□ -1.86
RNU6-1229P-201ENST00000364295 FMNL2Q96PY5 1086 aa3.41□□□□□ -1.86
RNU6-1229P-201ENST00000364295 IFNLR1Q8IU57 520 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1229P-201ENST00000364295 CFHP08603 1231 aa3.39□□□□□ -1.87
RNU6-1229P-201ENST00000364295 EN1Q05925 392 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1229P-201ENST00000364295 FKBP8Q14318 412 aa3.39□□□□□ -1.87
RNU6-1229P-201ENST00000364295 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
RNU6-1229P-201ENST00000364295 CERKQ8TCT0 537 aa3.39□□□□□ -1.87
RNU6-1229P-201ENST00000364295 CDC14CA4D256 554 aa3.38□□□□□ -1.87
RNU6-1229P-201ENST00000364295 NANOS1Q8WY41 292 aaKnown RBP3.38□□□□□ -1.87
RNU6-1229P-201ENST00000364295 DDX12PQ92771 950 aa3.38□□□□□ -1.87
RNU6-1229P-201ENST00000364295 LRP8Q14114 963 aa3.37□□□□□ -1.87
RNU6-1229P-201ENST00000364295 NBR1Q14596 966 aa3.37□□□□□ -1.87
RNU6-1229P-201ENST00000364295 C6orf118Q5T5N4 469 aa3.37□□□□□ -1.87
RNU6-1229P-201ENST00000364295 ALYREFQ86V81 257 aaKnown RBP3.37□□□□□ -1.87
RNU6-1229P-201ENST00000364295 EMILIN3Q9NT22 766 aa3.37□□□□□ -1.87
RNU6-1229P-201ENST00000364295 C1QTNF9BB2RNN3 333 aa3.36□□□□□ -1.87
RNU6-1229P-201ENST00000364295 SRSF11Q05519 484 aaKnown RBP3.36□□□□□ -1.87
RNU6-1229P-201ENST00000364295 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
RNU6-1229P-201ENST00000364295 SH3RF1Q7Z6J0 888 aa3.36□□□□□ -1.87
RNU6-1229P-201ENST00000364295 VWA5B2Q8N398 1253 aa3.36□□□□□ -1.87
RNU6-1229P-201ENST00000364295 PDE4AP27815 886 aa3.35□□□□□ -1.87
RNU6-1229P-201ENST00000364295 JAG1P78504 1218 aa3.35□□□□□ -1.87
RNU6-1229P-201ENST00000364295 PUS10Q3MIT2 529 aaKnown RBP3.35□□□□□ -1.87
RNU6-1229P-201ENST00000364295 SV2AQ7L0J3 742 aa3.35□□□□□ -1.87
RNU6-1229P-201ENST00000364295 COL17A1Q9UMD9 1497 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1229P-201ENST00000364295 PRDM9Q9NQV7 894 aa3.34□□□□□ -1.87
RNU6-1229P-201ENST00000364295 GRIN2CQ14957 1233 aa3.33□□□□□ -1.88
RNU6-1229P-201ENST00000364295 DDX27Q96GQ7 796 aaKnown RBP3.33□□□□□ -1.88
RNU6-1229P-201ENST00000364295 RNF114Q9Y508 228 aa3.33□□□□□ -1.88
RNU6-1229P-201ENST00000364295 HYAL3O43820 417 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1229P-201ENST00000364295 COL8A1P27658 744 aa3.32□□□□□ -1.88
RNU6-1229P-201ENST00000364295 WNT7BP56706 349 aa3.32□□□□□ -1.88
RNU6-1229P-201ENST00000364295 SKOR1P84550 965 aa3.32□□□□□ -1.88
RNU6-1229P-201ENST00000364295 PTSQ03393 145 aa3.32□□□□□ -1.88
RNU6-1229P-201ENST00000364295 CD163Q86VB7 1156 aa3.32□□□□□ -1.88
RNU6-1229P-201ENST00000364295 FAM160A2Q8N612 972 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1229P-201ENST00000364295 BCRP11274 1271 aa3.31□□□□□ -1.88
RNU6-1229P-201ENST00000364295 BMP2P12643 396 aa3.31□□□□□ -1.88
RNU6-1229P-201ENST00000364295 EHBP1Q8NDI1 1231 aa3.31□□□□□ -1.88
RNU6-1229P-201ENST00000364295 LARP6Q9BRS8 491 aaKnown RBP3.31□□□□□ -1.88
RNU6-1229P-201ENST00000364295 DNMT3LQ9UJW3 386 aa3.31□□□□□ -1.88
RNU6-1229P-201ENST00000364295 NCKAP5LQ9HCH0 1330 aa3.3□□□□□ -1.88
RNU6-1229P-201ENST00000364295 FECHP22830 423 aa3.3□□□□□ -1.88
RNU6-1229P-201ENST00000364295 WDR4P57081 412 aaKnown RBP3.3□□□□□ -1.88
RNU6-1229P-201ENST00000364295 KRTAP1-1Q07627 177 aa3.3□□□□□ -1.88
RNU6-1229P-201ENST00000364295 CCDC155Q8N6L0 562 aa3.3□□□□□ -1.88
RNU6-1229P-201ENST00000364295 RBM27Q9P2N5 1060 aaKnown RBP3.3□□□□□ -1.88
RNU6-1229P-201ENST00000364295 MKL2Q9ULH7 1088 aa3.3□□□□□ -1.88
RNU6-1229P-201ENST00000364295 UPP2O95045 317 aa3.29□□□□□ -1.88
RNU6-1229P-201ENST00000364295 FMNL1O95466 1100 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1229P-201ENST00000364295 CHRNA4P43681 627 aa3.29□□□□□ -1.88
RNU6-1229P-201ENST00000364295 RSPO4Q2I0M5 234 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1229P-201ENST00000364295 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms