RNA–Protein interactions for RNA: ENST00000362944.1

RNU6-1260P-201, Transcript of RNA, U6 small nuclear 1260, pseudogene, humanhuman

BASIC

Gene RNU6-1260P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1260P-201ENST00000362944 NUTM2FA1L443 756 aa2.52□□□□□ -2.01
RNU6-1260P-201ENST00000362944 SOBPA7XYQ1 873 aa2.52□□□□□ -2.01
RNU6-1260P-201ENST00000362944 FMNL1O95466 1100 aaPredicted RBP2.52□□□□□ -2.01
RNU6-1260P-201ENST00000362944 ALDH1A1P00352 501 aa2.52□□□□□ -2.01
RNU6-1260P-201ENST00000362944 SKOR1P84550 965 aa2.52□□□□□ -2.01
RNU6-1260P-201ENST00000362944 RDH13Q8NBN7 331 aa2.52□□□□□ -2.01
RNU6-1260P-201ENST00000362944 WDR70Q9NW82 654 aa2.52□□□□□ -2.01
RNU6-1260P-201ENST00000362944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.51□□□□□ -2.01
RNU6-1260P-201ENST00000362944 ATP6V1AP38606 617 aa2.51□□□□□ -2.01
RNU6-1260P-201ENST00000362944 RC3H1Q5TC82 1133 aaKnown RBP2.51□□□□□ -2.01
RNU6-1260P-201ENST00000362944 BRICD5Q6PL45 260 aa2.51□□□□□ -2.01
RNU6-1260P-201ENST00000362944 PXYLP1Q8TE99 480 aa2.51□□□□□ -2.01
RNU6-1260P-201ENST00000362944 DDX11L8A8MPP1 907 aa2.5□□□□□ -2.01
RNU6-1260P-201ENST00000362944 CAPN5O15484 640 aaPredicted RBP2.5□□□□□ -2.01
RNU6-1260P-201ENST00000362944 RSPH4AQ5TD94 716 aa2.5□□□□□ -2.01
RNU6-1260P-201ENST00000362944 METTL3Q86U44 580 aaKnown RBP2.5□□□□□ -2.01
RNU6-1260P-201ENST00000362944 CCDC24Q8N4L8 307 aa2.5□□□□□ -2.01
RNU6-1260P-201ENST00000362944 ZFP42Q96MM3 310 aa2.5□□□□□ -2.01
RNU6-1260P-201ENST00000362944 GDF11O95390 407 aa2.49□□□□□ -2.01
RNU6-1260P-201ENST00000362944 GCGRP47871 477 aa2.49□□□□□ -2.01
RNU6-1260P-201ENST00000362944 RASSF7Q02833 373 aa2.49□□□□□ -2.01
RNU6-1260P-201ENST00000362944 KCNMA1Q12791 1236 aa2.49□□□□□ -2.01
RNU6-1260P-201ENST00000362944 MSS51Q4VC12 460 aa2.49□□□□□ -2.01
RNU6-1260P-201ENST00000362944 NPAS3Q8IXF0 933 aa2.49□□□□□ -2.01
RNU6-1260P-201ENST00000362944 OATP04181 439 aa2.48□□□□□ -2.01
RNU6-1260P-201ENST00000362944 MMP16P51512 607 aa2.48□□□□□ -2.01
RNU6-1260P-201ENST00000362944 XP32Q5T750 250 aa2.48□□□□□ -2.01
RNU6-1260P-201ENST00000362944 GPAT2Q6NUI2 795 aa2.48□□□□□ -2.01
RNU6-1260P-201ENST00000362944 TMEM151AQ8N4L1 468 aa2.48□□□□□ -2.01
RNU6-1260P-201ENST00000362944 HLA-CQ95604 372 aa2.48□□□□□ -2.01
RNU6-1260P-201ENST00000362944 PHOX2BQ99453 314 aa2.48□□□□□ -2.01
RNU6-1260P-201ENST00000362944 REPIN1Q9BWE0 567 aaKnown RBP2.48□□□□□ -2.01
RNU6-1260P-201ENST00000362944 SALL2Q9Y467 1007 aaPredicted RBP2.48□□□□□ -2.01
RNU6-1260P-201ENST00000362944 WASF2Q9Y6W5 498 aa2.48□□□□□ -2.01
RNU6-1260P-201ENST00000362944 SIAH2O43255 324 aa2.47□□□□□ -2.01
RNU6-1260P-201ENST00000362944 FCHSD2O94868 740 aa2.47□□□□□ -2.01
RNU6-1260P-201ENST00000362944 SPRYD3Q8NCJ5 442 aa2.47□□□□□ -2.01
RNU6-1260P-201ENST00000362944 EHBP1Q8NDI1 1231 aa2.47□□□□□ -2.01
RNU6-1260P-201ENST00000362944 BBXQ8WY36 941 aaPredicted RBP2.47□□□□□ -2.01
RNU6-1260P-201ENST00000362944 PURBQ96QR8 312 aaKnown RBP2.47□□□□□ -2.01
RNU6-1260P-201ENST00000362944 DAXXQ9UER7 740 aaPredicted RBP2.47□□□□□ -2.01
RNU6-1260P-201ENST00000362944 DXOO77932 396 aaKnown RBP2.46□□□□□ -2.02
RNU6-1260P-201ENST00000362944 VSIG8P0DPA2 414 aa2.46□□□□□ -2.02
RNU6-1260P-201ENST00000362944 WNT7BP56706 349 aa2.46□□□□□ -2.02
RNU6-1260P-201ENST00000362944 KRT76Q01546 638 aa2.46□□□□□ -2.02
RNU6-1260P-201ENST00000362944 PTCRAQ6ISU1 281 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1260P-201ENST00000362944 KCNV2Q8TDN2 545 aa2.46□□□□□ -2.02
RNU6-1260P-201ENST00000362944 CFAP44Q96MT7 982 aa2.46□□□□□ -2.02
RNU6-1260P-201ENST00000362944 USB1Q9BQ65 265 aaKnown RBP2.46□□□□□ -2.02
RNU6-1260P-201ENST00000362944 ADAMTS8Q9UP79 889 aa2.46□□□□□ -2.02
RNU6-1260P-201ENST00000362944 TLL2Q9Y6L7 1015 aa2.46□□□□□ -2.02
RNU6-1260P-201ENST00000362944 SEMA3EO15041 775 aa2.45□□□□□ -2.02
RNU6-1260P-201ENST00000362944 GUCA2AQ02747 115 aa2.45□□□□□ -2.02
RNU6-1260P-201ENST00000362944 RBM26Q5T8P6 1007 aaKnown RBP2.45□□□□□ -2.02
RNU6-1260P-201ENST00000362944 MRPL14Q6P1L8 145 aaKnown RBP2.45□□□□□ -2.02
RNU6-1260P-201ENST00000362944 GPR161Q8N6U8 529 aaKnown RBP2.45□□□□□ -2.02
RNU6-1260P-201ENST00000362944 SYMPKQ92797 1274 aaKnown RBP2.45□□□□□ -2.02
RNU6-1260P-201ENST00000362944 KRTAP4-8Q9BYQ9 185 aa2.45□□□□□ -2.02
RNU6-1260P-201ENST00000362944 MAN1A2O60476 641 aa2.44□□□□□ -2.02
RNU6-1260P-201ENST00000362944 PPFIA3O75145 1194 aa2.44□□□□□ -2.02
RNU6-1260P-201ENST00000362944 IRS1P35568 1242 aa2.44□□□□□ -2.02
RNU6-1260P-201ENST00000362944 SH3BP2P78314 561 aa2.44□□□□□ -2.02
RNU6-1260P-201ENST00000362944 Q3C1V9 767 aa2.44□□□□□ -2.02
RNU6-1260P-201ENST00000362944 C6orf118Q5T5N4 469 aa2.44□□□□□ -2.02
RNU6-1260P-201ENST00000362944 PAXIP1Q6ZW49 1069 aaPredicted RBP2.44□□□□□ -2.02
RNU6-1260P-201ENST00000362944 SULF1Q8IWU6 871 aa2.44□□□□□ -2.02
RNU6-1260P-201ENST00000362944 ARHGEF1Q92888 912 aaKnown RBP2.44□□□□□ -2.02
RNU6-1260P-201ENST00000362944 CNTNAP3BQ96NU0 1288 aa2.44□□□□□ -2.02
RNU6-1260P-201ENST00000362944 CNTNAP3Q9BZ76 1288 aa2.44□□□□□ -2.02
RNU6-1260P-201ENST00000362944 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.43□□□□□ -2.02
RNU6-1260P-201ENST00000362944 TIMP2P16035 220 aa2.43□□□□□ -2.02
RNU6-1260P-201ENST00000362944 WDR4P57081 412 aaKnown RBP2.43□□□□□ -2.02
RNU6-1260P-201ENST00000362944 NNTQ13423 1086 aa2.43□□□□□ -2.02
RNU6-1260P-201ENST00000362944 SCARF1Q14162 830 aa2.43□□□□□ -2.02
RNU6-1260P-201ENST00000362944 HIC1Q14526 733 aa2.43□□□□□ -2.02
RNU6-1260P-201ENST00000362944 LINC01559Q495D7 138 aa2.43□□□□□ -2.02
RNU6-1260P-201ENST00000362944 GRIPAP1Q4V328 841 aa2.43□□□□□ -2.02
RNU6-1260P-201ENST00000362944 RNFT1Q5M7Z0 435 aa2.43□□□□□ -2.02
RNU6-1260P-201ENST00000362944 WHAMMQ8TF30 809 aa2.43□□□□□ -2.02
RNU6-1260P-201ENST00000362944 RNF225M0QZC1 329 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 GNPATO15228 680 aa2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 GPR37O15354 613 aa2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 KDM4AO75164 1064 aa2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 ZNF385CQ66K41 422 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 SVOPQ8N4V2 548 aa2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 BAP1Q92560 729 aa2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 NUDT12Q9BQG2 462 aa2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 KLF16Q9BXK1 252 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 KRTAP9-2Q9BYQ4 174 aa2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 ZFAND3Q9H8U3 227 aa2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 DNMT3AQ9Y6K1 912 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1260P-201ENST00000362944 KRTAP9-6A0A140TA67 174 aa2.41□□□□□ -2.02
RNU6-1260P-201ENST00000362944 ADH1CP00326 375 aa2.41□□□□□ -2.02
RNU6-1260P-201ENST00000362944 CD46P15529 392 aa2.41□□□□□ -2.02
RNU6-1260P-201ENST00000362944 JUNDP17535 347 aa2.41□□□□□ -2.02
RNU6-1260P-201ENST00000362944 ITPKCQ96DU7 683 aa2.41□□□□□ -2.02
RNU6-1260P-201ENST00000362944 COL25A1Q9BXS0 654 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1260P-201ENST00000362944 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1260P-201ENST00000362944 DNMT3LQ9UJW3 386 aa2.41□□□□□ -2.02
RNU6-1260P-201ENST00000362944 HOXA2O43364 376 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms