RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 COG3Q96JB2 828 aa7.1□□□□□ -1.27
DSC3-201ENST00000360428 BIVM-ERCC5R4GMW8 1640 aa7.09□□□□□ -1.27
DSC3-201ENST00000360428 VPS37CA5D8V6 355 aaPredicted RBP7.09□□□□□ -1.27
DSC3-201ENST00000360428 GOLGA6L10A6NI86 522 aa7.09□□□□□ -1.27
DSC3-201ENST00000360428 C22orf23Q9BZE7 217 aa7.09□□□□□ -1.27
DSC3-201ENST00000360428 INCENPQ9NQS7 918 aa7.09□□□□□ -1.27
DSC3-201ENST00000360428 SLC4A3P48751 1232 aa7.09□□□□□ -1.27
DSC3-201ENST00000360428 LUC7LQ9NQ29 371 aaKnown RBP7.09□□□□□ -1.27
DSC3-201ENST00000360428 MAGEC2Q9UBF1 373 aaPredicted RBP7.09□□□□□ -1.27
DSC3-201ENST00000360428 EIF3JO75822 258 aaKnown RBP7.09□□□□□ -1.27
DSC3-201ENST00000360428 FOXD1Q16676 465 aa7.09□□□□□ -1.27
DSC3-201ENST00000360428 PDILTQ8N807 584 aa7.09□□□□□ -1.27
DSC3-201ENST00000360428 CDC45O75419 566 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 TRHP20396 242 aaPredicted RBP7.08□□□□□ -1.28
DSC3-201ENST00000360428 L3MBTL2Q969R5 705 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 TSPYL1Q9H0U9 437 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 CCDC9Q9Y3X0 531 aaKnown RBP7.08□□□□□ -1.28
DSC3-201ENST00000360428 HIP1O00291 1037 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 PANK3Q9H999 370 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 CCDC144AA2RUR9 1427 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 TEFQ10587 303 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 TTC5Q8N0Z6 440 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 ZNF396Q96N95 335 aaPredicted RBP7.08□□□□□ -1.28
DSC3-201ENST00000360428 DACH1Q9UI36 760 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 ERLIN1O75477 346 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 PDCP20941 246 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 RALYLQ86SE5 291 aaKnown RBP7.08□□□□□ -1.28
DSC3-201ENST00000360428 COG6Q9Y2V7 657 aa7.08□□□□□ -1.28
DSC3-201ENST00000360428 IQCEQ6IPM2 695 aa7.07□□□□□ -1.28
DSC3-201ENST00000360428 CNKSR2Q8WXI2 1034 aa7.07□□□□□ -1.28
DSC3-201ENST00000360428 DHX16O60231 1041 aaKnown RBP7.07□□□□□ -1.28
DSC3-201ENST00000360428 NFKBIBQ15653 356 aa7.07□□□□□ -1.28
DSC3-201ENST00000360428 VPS37DQ86XT2 251 aa7.07□□□□□ -1.28
DSC3-201ENST00000360428 CNTROBQ8N137 903 aa7.07□□□□□ -1.28
DSC3-201ENST00000360428 CT47B1P0C2W7 299 aaPredicted RBP7.07□□□□□ -1.28
DSC3-201ENST00000360428 TXLNAP40222 546 aa7.07□□□□□ -1.28
DSC3-201ENST00000360428 SDF4Q9BRK5 362 aa7.07□□□□□ -1.28
DSC3-201ENST00000360428 TRIM5Q9C035 493 aa7.07□□□□□ -1.28
DSC3-201ENST00000360428 CWC22Q9HCG8 908 aaKnown RBP7.07□□□□□ -1.28
DSC3-201ENST00000360428 ZNHIT6Q9NWK9 470 aaKnown RBP7.07□□□□□ -1.28
DSC3-201ENST00000360428 AXDND1Q5T1B0 1012 aaPredicted RBP7.06□□□□□ -1.28
DSC3-201ENST00000360428 RUNDC1Q96C34 613 aa7.06□□□□□ -1.28
DSC3-201ENST00000360428 KINO60870 393 aaKnown RBP7.06□□□□□ -1.28
DSC3-201ENST00000360428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.06□□□□□ -1.28
DSC3-201ENST00000360428 TRAK2O60296 914 aa7.06□□□□□ -1.28
DSC3-201ENST00000360428 SYCP1Q15431 976 aa7.06□□□□□ -1.28
DSC3-201ENST00000360428 SEPT7Q16181 437 aaKnown RBP7.06□□□□□ -1.28
DSC3-201ENST00000360428 PRKRIP1Q9H875 184 aaPredicted RBP7.06□□□□□ -1.28
DSC3-201ENST00000360428 CBFA2T2O43439 604 aa7.06□□□□□ -1.28
DSC3-201ENST00000360428 ZFYVE27Q5T4F4 411 aa7.06□□□□□ -1.28
DSC3-201ENST00000360428 RRP7AQ9Y3A4 280 aaKnown RBP7.06□□□□□ -1.28
DSC3-201ENST00000360428 GNAI1P63096 354 aa7.06□□□□□ -1.28
DSC3-201ENST00000360428 WWC2Q6AWC2 1192 aa7.06□□□□□ -1.28
DSC3-201ENST00000360428 PDCL2Q8N4E4 241 aa7.06□□□□□ -1.28
DSC3-201ENST00000360428 PLIN1O60240 522 aa7.05□□□□□ -1.28
DSC3-201ENST00000360428 DIAPH1O60610 1272 aaKnown RBP7.05□□□□□ -1.28
DSC3-201ENST00000360428 SMC2O95347 1197 aa7.05□□□□□ -1.28
DSC3-201ENST00000360428 SART3Q15020 963 aaKnown RBP7.05□□□□□ -1.28
DSC3-201ENST00000360428 PKNOX2Q96KN3 472 aa7.05□□□□□ -1.28
DSC3-201ENST00000360428 AEBP1Q8IUX7 1158 aa7.05□□□□□ -1.28
DSC3-201ENST00000360428 PDIA4P13667 645 aaKnown RBP7.05□□□□□ -1.28
DSC3-201ENST00000360428 EZRP15311 586 aaKnown RBP7.05□□□□□ -1.28
DSC3-201ENST00000360428 LTV1Q96GA3 475 aaPredicted RBP7.05□□□□□ -1.28
DSC3-201ENST00000360428 NEFHP12036 1026 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 HSP90AB3PQ58FF7 597 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 JMYQ8N9B5 988 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 KIF3BO15066 747 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 VGFO15240 615 aaPredicted RBP7.04□□□□□ -1.28
DSC3-201ENST00000360428 TOP2BQ02880 1626 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 FBXO3Q9UK99 471 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 USP47Q96K76 1375 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 STAC3Q96MF2 364 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 DEF6Q9H4E7 631 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 WASHC2CQ9Y4E1 1318 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 KANK4Q5T7N3 995 aaPredicted RBP7.04□□□□□ -1.28
DSC3-201ENST00000360428 RAD21O60216 631 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 STIM1Q13586 685 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 FBXW7Q969H0 707 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 RRP9O43818 475 aaKnown RBP7.04□□□□□ -1.28
DSC3-201ENST00000360428 SLC3A2P08195 630 aaKnown RBP7.04□□□□□ -1.28
DSC3-201ENST00000360428 CCDC192P0DO97 292 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 EVA1CP58658 441 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 ANKRD1Q15327 319 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 CDK5RAP3Q96JB5 506 aa7.04□□□□□ -1.28
DSC3-201ENST00000360428 CCDC181Q5TID7 509 aa7.03□□□□□ -1.28
DSC3-201ENST00000360428 PPFIBP1Q86W92 1011 aa7.03□□□□□ -1.28
DSC3-201ENST00000360428 PLCD4Q9BRC7 762 aa7.03□□□□□ -1.28
DSC3-201ENST00000360428 BCL2L13Q9BXK5 485 aa7.03□□□□□ -1.28
DSC3-201ENST00000360428 RIPK4P57078 832 aa7.03□□□□□ -1.28
DSC3-201ENST00000360428 CCAR1Q8IX12 1150 aaKnown RBP7.03□□□□□ -1.28
DSC3-201ENST00000360428 GBP2P32456 591 aaPredicted RBP7.03□□□□□ -1.28
DSC3-201ENST00000360428 CCDC112Q8NEF3 446 aa7.03□□□□□ -1.28
DSC3-201ENST00000360428 KIF21BO75037 1637 aa7.03□□□□□ -1.28
DSC3-201ENST00000360428 ST20-MTHFSA0A0A6YYL1 179 aa7.02□□□□□ -1.29
DSC3-201ENST00000360428 ERC1Q8IUD2 1116 aa7.02□□□□□ -1.29
DSC3-201ENST00000360428 TRAK1Q9UPV9 953 aa7.02□□□□□ -1.29
DSC3-201ENST00000360428 MIA2Q96PC5 1412 aa7.02□□□□□ -1.29
DSC3-201ENST00000360428 CUX1P39880 1505 aa7.02□□□□□ -1.29
DSC3-201ENST00000360428 WASHC2AQ641Q2 1341 aa7.02□□□□□ -1.29
DSC3-201ENST00000360428 PRDM2Q13029 1718 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms