RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 RSBN1LQ6PCB5 846 aaPredicted RBP3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 PCDHB8Q9UN66 801 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 PCDHB13Q9Y5F0 798 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 CUX2O14529 1486 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 CHD1O14646 1710 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 ERCC3P19447 782 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 C7orf43Q8WVR3 580 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 KCNQ5Q9NR82 932 aa3.11□□□□□ -1.91
SMARCAD1-202ENST00000359052 PPP1R15BQ5SWA1 713 aa3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 NFATC2IPQ8NCF5 419 aa3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 MSRB2Q9Y3D2 182 aa3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 TMCO4Q5TGY1 634 aa3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 SPIRE2Q8WWL2 714 aa3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 PCDHGC3Q9UN70 934 aa3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 QPCTQ16769 361 aa3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 KDM5BQ9UGL1 1544 aa3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 PTK7Q13308 1070 aa3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 PELP1Q8IZL8 1130 aaKnown RBP3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 EGFL7Q9UHF1 273 aa3.1□□□□□ -1.91
SMARCAD1-202ENST00000359052 SAMD9Q5K651 1589 aa3.09□□□□□ -1.91
SMARCAD1-202ENST00000359052 CANXP27824 592 aaKnown RBP3.09□□□□□ -1.91
SMARCAD1-202ENST00000359052 DPYSL4O14531 572 aa3.09□□□□□ -1.91
SMARCAD1-202ENST00000359052 CTSHP09668 335 aa3.09□□□□□ -1.91
SMARCAD1-202ENST00000359052 PSEN1P49768 467 aa3.09□□□□□ -1.91
SMARCAD1-202ENST00000359052 IVNS1ABPQ9Y6Y0 642 aa3.09□□□□□ -1.91
SMARCAD1-202ENST00000359052 PATL2C9JE40 543 aaKnown RBP3.09□□□□□ -1.92
SMARCAD1-202ENST00000359052 PARNO95453 639 aaKnown RBP3.09□□□□□ -1.92
SMARCAD1-202ENST00000359052 EVA1CP58658 441 aa3.09□□□□□ -1.92
SMARCAD1-202ENST00000359052 FANCCQ00597 558 aa3.09□□□□□ -1.92
SMARCAD1-202ENST00000359052 FAM26DQ5JW98 314 aa3.09□□□□□ -1.92
SMARCAD1-202ENST00000359052 SRA1Q9HD15 236 aaKnown RBP3.09□□□□□ -1.92
SMARCAD1-202ENST00000359052 RUSC2Q8N2Y8 1516 aa3.09□□□□□ -1.92
SMARCAD1-202ENST00000359052 PALM3A6NDB9 673 aaPredicted RBP3.09□□□□□ -1.92
SMARCAD1-202ENST00000359052 TMEM164Q5U3C3 297 aa3.09□□□□□ -1.92
SMARCAD1-202ENST00000359052 PRPF38BQ5VTL8 546 aaKnown RBP3.09□□□□□ -1.92
SMARCAD1-202ENST00000359052 THRAP3Q9Y2W1 955 aaKnown RBP3.09□□□□□ -1.92
SMARCAD1-202ENST00000359052 POTEB2H3BUK9 544 aa3.08□□□□□ -1.92
SMARCAD1-202ENST00000359052 ZBTB7BO15156 539 aaPredicted RBP3.08□□□□□ -1.92
SMARCAD1-202ENST00000359052 PDE4AP27815 886 aa3.08□□□□□ -1.92
SMARCAD1-202ENST00000359052 RTL5Q5HYW3 569 aaPredicted RBP3.08□□□□□ -1.92
SMARCAD1-202ENST00000359052 PODNQ7Z5L7 613 aa3.08□□□□□ -1.92
SMARCAD1-202ENST00000359052 EPS8L1Q8TE68 723 aa3.08□□□□□ -1.92
SMARCAD1-202ENST00000359052 TLDC2A0PJX2 215 aa3.08□□□□□ -1.92
SMARCAD1-202ENST00000359052 CLEC4GQ6UXB4 293 aa3.08□□□□□ -1.92
SMARCAD1-202ENST00000359052 PIK3R5Q8WYR1 880 aa3.08□□□□□ -1.92
SMARCAD1-202ENST00000359052 LARP6Q9BRS8 491 aaKnown RBP3.08□□□□□ -1.92
SMARCAD1-202ENST00000359052 CTTNBP2Q8WZ74 1663 aa3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 F12P00748 615 aaPredicted RBP3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 FGRP09769 529 aa3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 STK32AQ8WU08 396 aa3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 GPCPD1Q9NPB8 672 aa3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 TBC1D2BQ9UPU7 963 aa3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 APLP1P51693 650 aa3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 CHRDL2Q6WN34 429 aa3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 EIF4G3O43432 1585 aaKnown RBP3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 COL26A1Q96A83 441 aa3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 ALKBH8Q96BT7 664 aaKnown RBP3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 FGAP02671 866 aa3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 TCEAL1Q15170 157 aa3.07□□□□□ -1.92
SMARCAD1-202ENST00000359052 KLRG2A4D1S0 409 aaPredicted RBP3.06□□□□□ -1.92
SMARCAD1-202ENST00000359052 E9PSI1 815 aa3.06□□□□□ -1.92
SMARCAD1-202ENST00000359052 MIER1Q8N108 512 aa3.06□□□□□ -1.92
SMARCAD1-202ENST00000359052 NESP48681 1621 aa3.06□□□□□ -1.92
SMARCAD1-202ENST00000359052 ADCY10Q96PN6 1610 aa3.06□□□□□ -1.92
SMARCAD1-202ENST00000359052 NLRP6P59044 892 aa3.06□□□□□ -1.92
SMARCAD1-202ENST00000359052 SIX5Q8N196 739 aa3.06□□□□□ -1.92
SMARCAD1-202ENST00000359052 SREK1Q8WXA9 508 aaKnown RBP3.06□□□□□ -1.92
SMARCAD1-202ENST00000359052 URB2Q14146 1524 aaKnown RBP3.06□□□□□ -1.92
SMARCAD1-202ENST00000359052 DNMBPQ6XZF7 1577 aa3.06□□□□□ -1.92
SMARCAD1-202ENST00000359052 EPHA4P54764 986 aa3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 ZNF467Q7Z7K2 595 aaPredicted RBP3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 SERINC2Q96SA4 455 aa3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 HIRIP3Q9BW71 556 aaPredicted RBP3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 SYNJ1O43426 1573 aa3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 RBM25P49756 843 aaKnown RBP3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 KCNB2Q92953 911 aa3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 ADAMTS12P58397 1594 aa3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 REM2Q8IYK8 340 aaPredicted RBP3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 FAM129BQ96TA1 746 aa3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 RNF19AQ9NV58 838 aa3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 PITPNM1O00562 1244 aa3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 MAP3K13O43283 966 aa3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 NOP9Q86U38 636 aaKnown RBP3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 JAZF1Q86VZ6 243 aa3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 CHST12Q9NRB3 414 aa3.05□□□□□ -1.92
SMARCAD1-202ENST00000359052 A6NJY4 79 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 BRD2P25440 801 aaKnown RBP3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 TMEM259Q4ZIN3 620 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 MICALL2Q8IY33 904 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 DRC1Q96MC2 740 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 ENAMQ9NRM1 1142 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 CIZ1Q9ULV3 898 aaPredicted RBP3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 HRH3Q9Y5N1 445 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 FAM174AQ8TBP5 190 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 MAP3K4Q9Y6R4 1608 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 FAM196BA6NMK8 535 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 SSTR3P32745 418 aaPredicted RBP3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 AMPD3Q01432 767 aa3.04□□□□□ -1.92
SMARCAD1-202ENST00000359052 UBXN4Q92575 508 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms