RNA–Protein interactions for RNA: ENST00000358678.7

MRPL42-201, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 1 (best)

Gene MRPL42, Length 2,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-201ENST00000358678 ZBTB3Q9H5J0 574 aa7.64□□□□□ -1.19
MRPL42-201ENST00000358678 RABGEF1Q9UJ41 708 aa7.64□□□□□ -1.19
MRPL42-201ENST00000358678 CFAP99D6REC4 459 aa7.63□□□□□ -1.19
MRPL42-201ENST00000358678 USP46P62068 366 aa7.63□□□□□ -1.19
MRPL42-201ENST00000358678 GLMNQ92990 594 aa7.62□□□□□ -1.19
MRPL42-201ENST00000358678 FUT2Q10981 343 aa7.61□□□□□ -1.19
MRPL42-201ENST00000358678 LRRN4Q8WUT4 740 aa7.61□□□□□ -1.19
MRPL42-201ENST00000358678 PDIA4P13667 645 aaKnown RBP7.61□□□□□ -1.19
MRPL42-201ENST00000358678 EPS8L1Q8TE68 723 aa7.61□□□□□ -1.19
MRPL42-201ENST00000358678 SLC4A5Q9BY07 1137 aa7.61□□□□□ -1.19
MRPL42-201ENST00000358678 ARHGAP33O14559 1287 aa7.6□□□□□ -1.19
MRPL42-201ENST00000358678 SYMPKQ92797 1274 aaKnown RBP7.6□□□□□ -1.19
MRPL42-201ENST00000358678 SAMD7Q7Z3H4 446 aa7.6□□□□□ -1.19
MRPL42-201ENST00000358678 VPS9D1Q9Y2B5 631 aa7.6□□□□□ -1.19
MRPL42-201ENST00000358678 MTMR2Q13614 643 aa7.59□□□□□ -1.19
MRPL42-201ENST00000358678 RETREG2Q8NC44 543 aa7.59□□□□□ -1.19
MRPL42-201ENST00000358678 FAM98CQ17RN3 349 aaKnown RBP7.58□□□□□ -1.2
MRPL42-201ENST00000358678 CALR3Q96L12 384 aaKnown RBP7.58□□□□□ -1.2
MRPL42-201ENST00000358678 ANKRD13DQ6ZTN6 518 aa7.58□□□□□ -1.2
MRPL42-201ENST00000358678 NDUFB9Q9Y6M9 179 aa7.58□□□□□ -1.2
MRPL42-201ENST00000358678 BHMG1C9JSJ3 638 aaPredicted RBP7.57□□□□□ -1.2
MRPL42-201ENST00000358678 CFHP08603 1231 aa7.57□□□□□ -1.2
MRPL42-201ENST00000358678 PER1O15534 1290 aaPredicted RBP7.57□□□□□ -1.2
MRPL42-201ENST00000358678 KCNH8Q96L42 1107 aa7.57□□□□□ -1.2
MRPL42-201ENST00000358678 TRAIPQ9BWF2 469 aa7.56□□□□□ -1.2
MRPL42-201ENST00000358678 VAC14Q08AM6 782 aa7.55□□□□□ -1.2
MRPL42-201ENST00000358678 RSPH4AQ5TD94 716 aa7.55□□□□□ -1.2
MRPL42-201ENST00000358678 TSC1Q92574 1164 aa7.55□□□□□ -1.2
MRPL42-201ENST00000358678 C6orf229H3BNL8 230 aa7.54□□□□□ -1.2
MRPL42-201ENST00000358678 HDGFL1Q5TGJ6 251 aa7.54□□□□□ -1.2
MRPL42-201ENST00000358678 SRPK2P78362 688 aaKnown RBP7.54□□□□□ -1.2
MRPL42-201ENST00000358678 CFAP70Q5T0N1 1121 aa7.54□□□□□ -1.2
MRPL42-201ENST00000358678 PUS10Q3MIT2 529 aaKnown RBP7.53□□□□□ -1.2
MRPL42-201ENST00000358678 SLF2Q8IX21 1173 aa7.53□□□□□ -1.2
MRPL42-201ENST00000358678 HELBQ8NG08 1087 aaPredicted RBP7.53□□□□□ -1.2
MRPL42-201ENST00000358678 ZFRQ96KR1 1074 aaKnown RBP7.53□□□□□ -1.2
MRPL42-201ENST00000358678 ATP6V1AP38606 617 aa7.52□□□□□ -1.2
MRPL42-201ENST00000358678 PRR7Q8TB68 274 aa7.52□□□□□ -1.2
MRPL42-201ENST00000358678 UCN2Q96RP3 112 aa7.52□□□□□ -1.2
MRPL42-201ENST00000358678 PRM3Q9NNZ6 103 aa7.52□□□□□ -1.2
MRPL42-201ENST00000358678 RNF40O75150 1001 aa7.52□□□□□ -1.21
MRPL42-201ENST00000358678 PBX2P40425 430 aa7.52□□□□□ -1.21
MRPL42-201ENST00000358678 NR6A1Q15406 480 aa7.52□□□□□ -1.21
MRPL42-201ENST00000358678 MORN1Q5T089 497 aa7.52□□□□□ -1.21
MRPL42-201ENST00000358678 WWC1Q8IX03 1113 aa7.52□□□□□ -1.21
MRPL42-201ENST00000358678 ALG2Q9H553 416 aa7.52□□□□□ -1.21
MRPL42-201ENST00000358678 LAPTM4BQ86VI4 370 aa7.51□□□□□ -1.21
MRPL42-201ENST00000358678 SLC27A5Q9Y2P5 690 aa7.51□□□□□ -1.21
MRPL42-201ENST00000358678 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.51□□□□□ -1.21
MRPL42-201ENST00000358678 LSM11P83369 360 aaKnown RBP eCLIP7.51□□□□□ -1.21
MRPL42-201ENST00000358678 HCSTQ9UBK5 93 aa7.5□□□□□ -1.21
MRPL42-201ENST00000358678 RNF19BQ6ZMZ0 732 aa7.49□□□□□ -1.21
MRPL42-201ENST00000358678 PLA2G2EQ9NZK7 142 aa7.49□□□□□ -1.21
MRPL42-201ENST00000358678 PPP1R15AO75807 674 aaPredicted RBP7.49□□□□□ -1.21
MRPL42-201ENST00000358678 HDGFP51858 240 aaKnown RBP7.49□□□□□ -1.21
MRPL42-201ENST00000358678 WASHC4Q2M389 1173 aa7.49□□□□□ -1.21
MRPL42-201ENST00000358678 BLOC1S3Q6QNY0 202 aa7.49□□□□□ -1.21
MRPL42-201ENST00000358678 ZBTB7CA1YPR0 619 aa7.48□□□□□ -1.21
MRPL42-201ENST00000358678 GRIPAP1Q4V328 841 aa7.48□□□□□ -1.21
MRPL42-201ENST00000358678 RETREG3Q86VR2 466 aa7.48□□□□□ -1.21
MRPL42-201ENST00000358678 PPP1R12CQ9BZL4 782 aa7.48□□□□□ -1.21
MRPL42-201ENST00000358678 ACTN4O43707 911 aaKnown RBP7.48□□□□□ -1.21
MRPL42-201ENST00000358678 RFX1P22670 979 aa7.48□□□□□ -1.21
MRPL42-201ENST00000358678 NBPF3Q9H094 633 aa7.48□□□□□ -1.21
MRPL42-201ENST00000358678 CARNS1A5YM72 827 aa7.47□□□□□ -1.21
MRPL42-201ENST00000358678 HRO43593 1189 aa7.47□□□□□ -1.21
MRPL42-201ENST00000358678 PALM3A6NDB9 673 aaPredicted RBP7.46□□□□□ -1.21
MRPL42-201ENST00000358678 PBXIP1Q96AQ6 731 aa7.46□□□□□ -1.21
MRPL42-201ENST00000358678 TK2O00142 265 aa7.46□□□□□ -1.22
MRPL42-201ENST00000358678 AEBP1Q8IUX7 1158 aa7.46□□□□□ -1.22
MRPL42-201ENST00000358678 DESI1Q6ICB0 168 aa7.45□□□□□ -1.22
MRPL42-201ENST00000358678 ADGRD1Q6QNK2 874 aa7.45□□□□□ -1.22
MRPL42-201ENST00000358678 APLP1P51693 650 aa7.45□□□□□ -1.22
MRPL42-201ENST00000358678 KMT5BQ4FZB7 885 aa7.45□□□□□ -1.22
MRPL42-201ENST00000358678 LYPD8Q6UX82 237 aa7.45□□□□□ -1.22
MRPL42-201ENST00000358678 SLC4A3P48751 1232 aa7.44□□□□□ -1.22
MRPL42-201ENST00000358678 MRPL50Q8N5N7 158 aaKnown RBP7.44□□□□□ -1.22
MRPL42-201ENST00000358678 THAP11Q96EK4 314 aa7.44□□□□□ -1.22
MRPL42-201ENST00000358678 KCTD17Q8N5Z5 321 aa7.43□□□□□ -1.22
MRPL42-201ENST00000358678 LRCH3Q96II8 777 aa7.43□□□□□ -1.22
MRPL42-201ENST00000358678 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.43□□□□□ -1.22
MRPL42-201ENST00000358678 TFIP11Q9UBB9 837 aaKnown RBP7.43□□□□□ -1.22
MRPL42-201ENST00000358678 BRICD5Q6PL45 260 aa7.43□□□□□ -1.22
MRPL42-201ENST00000358678 F12P00748 615 aaPredicted RBP7.42□□□□□ -1.22
MRPL42-201ENST00000358678 TBC1D9Q6ZT07 1266 aa7.42□□□□□ -1.22
MRPL42-201ENST00000358678 FBXO45P0C2W1 286 aa7.42□□□□□ -1.22
MRPL42-201ENST00000358678 BCAMP50895 628 aa7.42□□□□□ -1.22
MRPL42-201ENST00000358678 STAC3Q96MF2 364 aa7.42□□□□□ -1.22
MRPL42-201ENST00000358678 MAP10Q9P2G4 905 aa7.42□□□□□ -1.22
MRPL42-201ENST00000358678 MAFBQ9Y5Q3 323 aaPredicted RBP7.42□□□□□ -1.22
MRPL42-201ENST00000358678 LMOD1P29536 600 aaPredicted RBP7.41□□□□□ -1.22
MRPL42-201ENST00000358678 USB1Q9BQ65 265 aaKnown RBP7.41□□□□□ -1.22
MRPL42-201ENST00000358678 PIK3CDO00329 1044 aa7.4□□□□□ -1.22
MRPL42-201ENST00000358678 Q3C1V9 767 aa7.4□□□□□ -1.22
MRPL42-201ENST00000358678 SCUBE3Q8IX30 993 aa7.4□□□□□ -1.22
MRPL42-201ENST00000358678 SOWAHBA6NEL2 793 aa7.4□□□□□ -1.23
MRPL42-201ENST00000358678 CDCA8Q53HL2 280 aa7.39□□□□□ -1.23
MRPL42-201ENST00000358678 HPS5Q9UPZ3 1129 aa7.39□□□□□ -1.23
MRPL42-201ENST00000358678 CCDC9Q9Y3X0 531 aaKnown RBP7.39□□□□□ -1.23
MRPL42-201ENST00000358678 SALL2Q9Y467 1007 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms