RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 NUTM2FA1L443 756 aa13.28□□□□□ -0.28
GTF3C1-201ENST00000356183 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-201ENST00000356183 CCDC43Q96MW1 224 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-201ENST00000356183 TRDNQ13061 729 aa13.28□□□□□ -0.28
GTF3C1-201ENST00000356183 FAM193AP78312 1265 aa13.27□□□□□ -0.28
GTF3C1-201ENST00000356183 RNF20Q5VTR2 975 aa13.27□□□□□ -0.28
GTF3C1-201ENST00000356183 PANK3Q9H999 370 aa13.27□□□□□ -0.28
GTF3C1-201ENST00000356183 ANKRD62A6NC57 917 aa13.27□□□□□ -0.28
GTF3C1-201ENST00000356183 NEFHP12036 1026 aa13.27□□□□□ -0.28
GTF3C1-201ENST00000356183 MPNDQ8N594 471 aa13.27□□□□□ -0.28
GTF3C1-201ENST00000356183 OFD1O75665 1012 aa13.27□□□□□ -0.28
GTF3C1-201ENST00000356183 C9orf78Q9NZ63 289 aaPredicted RBP13.27□□□□□ -0.28
GTF3C1-201ENST00000356183 CENPHQ9H3R5 247 aa13.27□□□□□ -0.29
GTF3C1-201ENST00000356183 ENOX2Q16206 610 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-201ENST00000356183 LRRFIP1Q32MZ4 808 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-201ENST00000356183 UBE2Q2Q8WVN8 375 aa13.26□□□□□ -0.29
GTF3C1-201ENST00000356183 NGDNQ8NEJ9 315 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-201ENST00000356183 NUP155O75694 1391 aa13.26□□□□□ -0.29
GTF3C1-201ENST00000356183 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
GTF3C1-201ENST00000356183 LETM1O95202 739 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-201ENST00000356183 FYB1O15117 783 aa13.25□□□□□ -0.29
GTF3C1-201ENST00000356183 PRPF40AO75400 957 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-201ENST00000356183 ZRSR2Q15696 482 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-201ENST00000356183 DDX19BQ9UMR2 479 aa13.25□□□□□ -0.29
GTF3C1-201ENST00000356183 SAFBQ15424 915 aaKnown RBP eCLIP13.25□□□□□ -0.29
GTF3C1-201ENST00000356183 FMNL2Q96PY5 1086 aa13.25□□□□□ -0.29
GTF3C1-201ENST00000356183 LNPKQ9C0E8 428 aa13.25□□□□□ -0.29
GTF3C1-201ENST00000356183 PRDM10Q9NQV6 1147 aa13.25□□□□□ -0.29
GTF3C1-201ENST00000356183 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
GTF3C1-201ENST00000356183 SDF4Q9BRK5 362 aa13.24□□□□□ -0.29
GTF3C1-201ENST00000356183 MTMR7Q9Y216 660 aa13.24□□□□□ -0.29
GTF3C1-201ENST00000356183 C1orf141Q5JVX7 400 aa13.24□□□□□ -0.29
GTF3C1-201ENST00000356183 GOLGA6L10A6NI86 522 aa13.24□□□□□ -0.29
GTF3C1-201ENST00000356183 FAM177A1Q8N128 213 aaPredicted RBP13.23□□□□□ -0.29
GTF3C1-201ENST00000356183 RAPGEF2Q9Y4G8 1499 aa13.23□□□□□ -0.29
GTF3C1-201ENST00000356183 CCP110O43303 1012 aa13.23□□□□□ -0.29
GTF3C1-201ENST00000356183 SEPT7Q16181 437 aaKnown RBP13.23□□□□□ -0.29
GTF3C1-201ENST00000356183 VPS37DQ86XT2 251 aa13.23□□□□□ -0.29
GTF3C1-201ENST00000356183 DZIP1LQ8IYY4 767 aaKnown RBP13.23□□□□□ -0.29
GTF3C1-201ENST00000356183 CNTLNQ9NXG0 1405 aa13.23□□□□□ -0.29
GTF3C1-201ENST00000356183 CEBPZQ03701 1054 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-201ENST00000356183 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
GTF3C1-201ENST00000356183 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.22□□□□□ -0.29
GTF3C1-201ENST00000356183 BACH2Q9BYV9 841 aa13.22□□□□□ -0.29
GTF3C1-201ENST00000356183 MAGEC2Q9UBF1 373 aaPredicted RBP13.22□□□□□ -0.29
GTF3C1-201ENST00000356183 AEBP1Q8IUX7 1158 aa13.22□□□□□ -0.29
GTF3C1-201ENST00000356183 TRAK1Q9UPV9 953 aa13.21□□□□□ -0.29
GTF3C1-201ENST00000356183 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.3
GTF3C1-201ENST00000356183 APAF1O14727 1248 aa13.2□□□□□ -0.3
GTF3C1-201ENST00000356183 MEX3CQ5U5Q3 659 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-201ENST00000356183 DYDC1Q8WWB3 177 aa13.2□□□□□ -0.3
GTF3C1-201ENST00000356183 TDRD9Q8NDG6 1382 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-201ENST00000356183 ERLIN2O94905 339 aa13.2□□□□□ -0.3
GTF3C1-201ENST00000356183 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.39e-7■■■□□ 15
GTF3C1-201ENST00000356183 FILIP1LQ4L180 1135 aa13.2□□□□□ -0.3
GTF3C1-201ENST00000356183 BRMS1Q9HCU9 246 aa13.2□□□□□ -0.3
GTF3C1-201ENST00000356183 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
GTF3C1-201ENST00000356183 DEF6Q9H4E7 631 aa13.19□□□□□ -0.3
GTF3C1-201ENST00000356183 GOLGA6L7A0A1B0GV03 622 aa13.19□□□□□ -0.3
GTF3C1-201ENST00000356183 CCDC7Q96M83 1385 aa13.19□□□□□ -0.3
GTF3C1-201ENST00000356183 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-201ENST00000356183 CCDC181Q5TID7 509 aa13.19□□□□□ -0.3
GTF3C1-201ENST00000356183 TAF3Q5VWG9 929 aa13.19□□□□□ -0.3
GTF3C1-201ENST00000356183 ROCK1Q13464 1354 aa13.19□□□□□ -0.3
GTF3C1-201ENST00000356183 SERPINC1P01008 464 aa13.18□□□□□ -0.3
GTF3C1-201ENST00000356183 GIMAP7Q8NHV1 300 aa13.18□□□□□ -0.3
GTF3C1-201ENST00000356183 CLASRPQ8N2M8 674 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-201ENST00000356183 TICAM2Q86XR7 235 aa13.18□□□□□ -0.3
GTF3C1-201ENST00000356183 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
GTF3C1-201ENST00000356183 CDC45O75419 566 aa13.18□□□□□ -0.3
GTF3C1-201ENST00000356183 WASHC4Q2M389 1173 aa13.18□□□□□ -0.3
GTF3C1-201ENST00000356183 CCDC112Q8NEF3 446 aa13.18□□□□□ -0.3
GTF3C1-201ENST00000356183 ST20-MTHFSA0A0A6YYL1 179 aa13.17□□□□□ -0.3
GTF3C1-201ENST00000356183 KINO60870 393 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-201ENST00000356183 RALYLQ86SE5 291 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-201ENST00000356183 NINLQ9Y2I6 1382 aa13.17□□□□□ -0.3
GTF3C1-201ENST00000356183 USP47Q96K76 1375 aa13.17□□□□□ -0.3
GTF3C1-201ENST00000356183 RIPK4P57078 832 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 CBX1P83916 185 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 FIBPO43427 364 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 EIF3JO75822 258 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 ATP2B1P20020 1258 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 SYCP1Q15431 976 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 CCDC102AQ96A19 550 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 CCDC18Q5T9S5 1454 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 GRPEL1Q9HAV7 217 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 INCENPQ9NQS7 918 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 RBM25P49756 843 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 STK11IPQ8N1F8 1099 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 GPATCH11Q8N954 259 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 ERC2O15083 957 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 TTC5Q8N0Z6 440 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 NEUROD6Q96NK8 337 aa13.16□□□□□ -0.3
GTF3C1-201ENST00000356183 FKBP5Q13451 457 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-201ENST00000356183 COG3Q96JB2 828 aa13.15□□□□□ -0.3
GTF3C1-201ENST00000356183 LRRCC1Q9C099 1032 aa13.15□□□□□ -0.3
GTF3C1-201ENST00000356183 TEFQ10587 303 aa13.15□□□□□ -0.3
GTF3C1-201ENST00000356183 TMEM132AQ24JP5 1023 aa13.15□□□□□ -0.3
GTF3C1-201ENST00000356183 RUSC2Q8N2Y8 1516 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms