RNA–Protein interactions for RNA: ENST00000354336.7

CRKL-201, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRKL, Length 5,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-201ENST00000354336 UBTFL1P0CB47 393 aaPredicted RBP21.63■■□□□ 1.05
CRKL-201ENST00000354336 MRE11P49959 708 aa21.62■■□□□ 1.05
CRKL-201ENST00000354336 CCDC73Q6ZRK6 1079 aa21.62■■□□□ 1.05
CRKL-201ENST00000354336 TMEM132EQ6IEE7 984 aa21.61■■□□□ 1.05
CRKL-201ENST00000354336 NFXL1Q6ZNB6 911 aa21.61■■□□□ 1.05
CRKL-201ENST00000354336 HOMER1Q86YM7 354 aa21.6■■□□□ 1.05
CRKL-201ENST00000354336 ARAP1Q96P48 1450 aa21.6■■□□□ 1.05
CRKL-201ENST00000354336 CYB5RLQ6IPT4 315 aa21.6■■□□□ 1.05
CRKL-201ENST00000354336 NINLQ9Y2I6 1382 aa21.6■■□□□ 1.05
CRKL-201ENST00000354336 PCMTD1Q96MG8 357 aaPredicted RBP21.59■■□□□ 1.05
CRKL-201ENST00000354336 ERICH2A1L162 156 aa21.59■■□□□ 1.05
CRKL-201ENST00000354336 PDE3AQ14432 1141 aa21.59■■□□□ 1.05
CRKL-201ENST00000354336 RAPGEF4Q8WZA2 1011 aa21.59■■□□□ 1.05
CRKL-201ENST00000354336 RIC3Q7Z5B4 369 aa21.59■■□□□ 1.05
CRKL-201ENST00000354336 CFAP70Q5T0N1 1121 aa21.58■■□□□ 1.05
CRKL-201ENST00000354336 OSCARQ8IYS5 282 aa21.58■■□□□ 1.05
CRKL-201ENST00000354336 FAM13BQ9NYF5 915 aa21.58■■□□□ 1.05
CRKL-201ENST00000354336 GNAI3P08754 354 aa21.58■■□□□ 1.04
CRKL-201ENST00000354336 VPS37DQ86XT2 251 aa21.58■■□□□ 1.04
CRKL-201ENST00000354336 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.58■■□□□ 1.04
CRKL-201ENST00000354336 SCAPERQ9BY12 1400 aa21.57■■□□□ 1.04
CRKL-201ENST00000354336 PDZRN3Q9UPQ7 1066 aa21.57■■□□□ 1.04
CRKL-201ENST00000354336 VSIG10Q8N0Z9 540 aa21.57■■□□□ 1.04
CRKL-201ENST00000354336 HFM1A2PYH4 1435 aa21.57■■□□□ 1.04
CRKL-201ENST00000354336 SAFBQ15424 915 aaKnown RBP eCLIP21.56■■□□□ 1.04
CRKL-201ENST00000354336 CNTROBQ8N137 903 aa21.56■■□□□ 1.04
CRKL-201ENST00000354336 AQRO60306 1485 aaKnown RBP eCLIP21.56■■□□□ 1.043e-8■■■□□ 17.2
CRKL-201ENST00000354336 PSMA5P28066 241 aa21.56■■□□□ 1.04
CRKL-201ENST00000354336 EXOSC9Q06265 439 aaKnown RBP21.56■■□□□ 1.04
CRKL-201ENST00000354336 RALYLQ86SE5 291 aaKnown RBP21.56■■□□□ 1.04
CRKL-201ENST00000354336 NASPP49321 788 aaPredicted RBP21.56■■□□□ 1.04
CRKL-201ENST00000354336 ARHGAP5Q13017 1502 aa21.56■■□□□ 1.04
CRKL-201ENST00000354336 CFTRP13569 1480 aa21.55■■□□□ 1.04
CRKL-201ENST00000354336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.55■■□□□ 1.04
CRKL-201ENST00000354336 ZNF771Q7L3S4 317 aaPredicted RBP21.55■■□□□ 1.04
CRKL-201ENST00000354336 NEUROD6Q96NK8 337 aa21.55■■□□□ 1.04
CRKL-201ENST00000354336 TRAK2O60296 914 aa21.54■■□□□ 1.04
CRKL-201ENST00000354336 SETQ01105 290 aaPredicted RBP21.54■■□□□ 1.04
CRKL-201ENST00000354336 CCDC30Q5VVM6 783 aa21.54■■□□□ 1.04
CRKL-201ENST00000354336 CCDC39Q9UFE4 941 aa21.54■■□□□ 1.04
CRKL-201ENST00000354336 AIMP1Q12904 312 aaKnown RBP21.53■■□□□ 1.04
CRKL-201ENST00000354336 IFT57Q9NWB7 429 aa21.53■■□□□ 1.04
CRKL-201ENST00000354336 GCC1Q96CN9 775 aa21.53■■□□□ 1.04
CRKL-201ENST00000354336 PRKAR2BP31323 418 aa21.53■■□□□ 1.04
CRKL-201ENST00000354336 FOSBP53539 338 aa21.53■■□□□ 1.04
CRKL-201ENST00000354336 TRIM34Q9BYJ4 488 aa21.53■■□□□ 1.04
CRKL-201ENST00000354336 CLASRPQ8N2M8 674 aaKnown RBP21.53■■□□□ 1.04
CRKL-201ENST00000354336 GAS2L2Q8NHY3 880 aa21.53■■□□□ 1.04
CRKL-201ENST00000354336 KIAA1107Q9UPP5 1409 aa21.52■■□□□ 1.04
CRKL-201ENST00000354336 DHX16O60231 1041 aaKnown RBP21.52■■□□□ 1.04
CRKL-201ENST00000354336 SYTL4Q96C24 671 aaPredicted RBP21.52■■□□□ 1.04
CRKL-201ENST00000354336 MCM2P49736 904 aa21.52■■□□□ 1.03
CRKL-201ENST00000354336 RABEP1Q15276 862 aa21.52■■□□□ 1.03
CRKL-201ENST00000354336 WASHC4Q2M389 1173 aa21.52■■□□□ 1.03
CRKL-201ENST00000354336 NBPF1Q3BBV0 1214 aa21.52■■□□□ 1.03
CRKL-201ENST00000354336 FBXW7Q969H0 707 aa21.52■■□□□ 1.03
CRKL-201ENST00000354336 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
CRKL-201ENST00000354336 MBD3O95983 291 aa21.51■■□□□ 1.03
CRKL-201ENST00000354336 NLRP6P59044 892 aa21.51■■□□□ 1.03
CRKL-201ENST00000354336 RAD21O60216 631 aa21.51■■□□□ 1.03
CRKL-201ENST00000354336 TEX35Q5T0J7 233 aa21.51■■□□□ 1.03
CRKL-201ENST00000354336 SURF6O75683 361 aaKnown RBP21.5■■□□□ 1.03
CRKL-201ENST00000354336 TWISTNBQ3B726 338 aaPredicted RBP21.5■■□□□ 1.03
CRKL-201ENST00000354336 FSD1Q9BTV5 496 aa21.5■■□□□ 1.03
CRKL-201ENST00000354336 NAT10Q9H0A0 1025 aaKnown RBP21.5■■□□□ 1.03
CRKL-201ENST00000354336 LETM1O95202 739 aaPredicted RBP21.49■■□□□ 1.03
CRKL-201ENST00000354336 AFAP1Q8N556 730 aa21.49■■□□□ 1.03
CRKL-201ENST00000354336 NBPF8Q3BBV2 869 aa21.49■■□□□ 1.03
CRKL-201ENST00000354336 AKNAQ7Z591 1439 aa21.49■■□□□ 1.03
CRKL-201ENST00000354336 PNISRQ8TF01 805 aaKnown RBP21.49■■□□□ 1.03
CRKL-201ENST00000354336 TCEAL9Q9UHQ7 104 aa21.49■■□□□ 1.03
CRKL-201ENST00000354336 EHBP1L1Q8N3D4 1523 aa21.49■■□□□ 1.03
CRKL-201ENST00000354336 NEK4P51957 841 aa21.48■■□□□ 1.03
CRKL-201ENST00000354336 NLRP2Q9NX02 1062 aa21.48■■□□□ 1.03
CRKL-201ENST00000354336 FAM69CQ0P6D2 419 aa21.48■■□□□ 1.03
CRKL-201ENST00000354336 SYNJ2O15056 1496 aa21.48■■□□□ 1.03
CRKL-201ENST00000354336 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
CRKL-201ENST00000354336 EFCAB5A4FU69 1503 aa21.48■■□□□ 1.03
CRKL-201ENST00000354336 NOB1Q9ULX3 412 aaKnown RBP21.47■■□□□ 1.03
CRKL-201ENST00000354336 CAVIN1Q6NZI2 390 aaKnown RBP21.47■■□□□ 1.03
CRKL-201ENST00000354336 RNF214Q8ND24 703 aa21.47■■□□□ 1.03
CRKL-201ENST00000354336 MNS1Q8NEH6 495 aa21.47■■□□□ 1.03
CRKL-201ENST00000354336 ARGLU1Q9NWB6 273 aaPredicted RBP21.47■■□□□ 1.03
CRKL-201ENST00000354336 BCAR3O75815 825 aa21.47■■□□□ 1.03
CRKL-201ENST00000354336 NUTM2GQ5VZR2 741 aa21.47■■□□□ 1.03
CRKL-201ENST00000354336 PRM3Q9NNZ6 103 aa21.47■■□□□ 1.03
CRKL-201ENST00000354336 SMG6Q86US8 1419 aaKnown RBP21.46■■□□□ 1.03
CRKL-201ENST00000354336 CT47B1P0C2W7 299 aaPredicted RBP21.46■■□□□ 1.03
CRKL-201ENST00000354336 SDF4Q9BRK5 362 aa21.46■■□□□ 1.03
CRKL-201ENST00000354336 OLFM4Q6UX06 510 aa21.46■■□□□ 1.03
CRKL-201ENST00000354336 HIP1O00291 1037 aa21.46■■□□□ 1.03
CRKL-201ENST00000354336 BACH2Q9BYV9 841 aa21.45■■□□□ 1.02
CRKL-201ENST00000354336 C9orf84Q5VXU9 1444 aa21.45■■□□□ 1.02
CRKL-201ENST00000354336 GNAI2P04899 355 aa21.45■■□□□ 1.02
CRKL-201ENST00000354336 C1orf115Q9H7X2 142 aa21.45■■□□□ 1.02
CRKL-201ENST00000354336 PDCP20941 246 aa21.44■■□□□ 1.02
CRKL-201ENST00000354336 WDR63Q8IWG1 891 aa21.44■■□□□ 1.02
CRKL-201ENST00000354336 TSR2Q969E8 191 aaKnown RBP21.44■■□□□ 1.02
CRKL-201ENST00000354336 MSH5O43196 834 aa21.44■■□□□ 1.02
CRKL-201ENST00000354336 BRMS1Q9HCU9 246 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms