RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 PHLPP1O60346 1717 aa31.97■■■□□ 2.71
SNX3-202ENST00000349379 AHDC1Q5TGY3 1603 aaPredicted RBP31.96■■■□□ 2.71
SNX3-202ENST00000349379 NHSL1Q5SYE7 1610 aa31.93■■■□□ 2.7
SNX3-202ENST00000349379 FMN2Q9NZ56 1722 aa31.93■■■□□ 2.7
SNX3-202ENST00000349379 TRPM1Q7Z4N2 1603 aa31.93■■■□□ 2.7
SNX3-202ENST00000349379 COL16A1Q07092 1604 aaPredicted RBP31.92■■■□□ 2.7
SNX3-202ENST00000349379 C1orf167Q5SNV9 1468 aa31.91■■■□□ 2.7
SNX3-202ENST00000349379 ADGRB2O60241 1585 aa31.9■■■□□ 2.7
SNX3-202ENST00000349379 BRINP3Q76B58 766 aa31.9■■■□□ 2.7
SNX3-202ENST00000349379 PRAM1Q96QH2 718 aa31.87■■■□□ 2.69
SNX3-202ENST00000349379 TRAK1Q9UPV9 953 aa31.86■■■□□ 2.69
SNX3-202ENST00000349379 RGPD8O14715 1765 aaPredicted RBP31.84■■■□□ 2.69
SNX3-202ENST00000349379 NBPF1Q3BBV0 1214 aa31.83■■■□□ 2.69
SNX3-202ENST00000349379 TONSLQ96HA7 1378 aa31.81■■■□□ 2.68
SNX3-202ENST00000349379 POGKQ9P215 609 aa31.79■■■□□ 2.68
SNX3-202ENST00000349379 MED1Q15648 1581 aaPredicted RBP31.78■■■□□ 2.68
SNX3-202ENST00000349379 SAFB2Q14151 953 aaKnown RBP eCLIP31.77■■■□□ 2.68
SNX3-202ENST00000349379 USP32Q8NFA0 1604 aa31.77■■■□□ 2.68
SNX3-202ENST00000349379 SHPRHQ149N8 1683 aa31.76■■■□□ 2.68
SNX3-202ENST00000349379 CLSPNQ9HAW4 1339 aa31.75■■■□□ 2.67
SNX3-202ENST00000349379 ILDR2Q71H61 639 aa31.75■■■□□ 2.67
SNX3-202ENST00000349379 ORAI2Q96SN7 254 aa31.75■■■□□ 2.67
SNX3-202ENST00000349379 KIF1AQ12756 1690 aa31.74■■■□□ 2.67
SNX3-202ENST00000349379 NBPF8Q3BBV2 869 aa31.74■■■□□ 2.67
SNX3-202ENST00000349379 JCADQ9P266 1359 aa31.71■■■□□ 2.67
SNX3-202ENST00000349379 SOCS7O14512 581 aa31.71■■■□□ 2.67
SNX3-202ENST00000349379 GPRASP1Q5JY77 1395 aa31.7■■■□□ 2.67
SNX3-202ENST00000349379 ANKARQ7Z5J8 1434 aa31.69■■■□□ 2.66
SNX3-202ENST00000349379 QRICH2Q9H0J4 1663 aa31.69■■■□□ 2.66
SNX3-202ENST00000349379 RALGAPBQ86X10 1494 aa31.68■■■□□ 2.66
SNX3-202ENST00000349379 MINK1Q8N4C8 1332 aaPredicted RBP31.68■■■□□ 2.66
SNX3-202ENST00000349379 TULP4Q9NRJ4 1543 aa31.67■■■□□ 2.66
SNX3-202ENST00000349379 NUTM2FA1L443 756 aa31.67■■■□□ 2.66
SNX3-202ENST00000349379 DDX17Q92841 729 aaKnown RBP31.67■■■□□ 2.66
SNX3-202ENST00000349379 ROCK2O75116 1388 aaKnown RBP31.67■■■□□ 2.66
SNX3-202ENST00000349379 ESCO1Q5FWF5 840 aa31.66■■■□□ 2.66
SNX3-202ENST00000349379 HIRIP3Q9BW71 556 aaPredicted RBP31.65■■■□□ 2.66
SNX3-202ENST00000349379 SOS2Q07890 1332 aaPredicted RBP31.65■■■□□ 2.66
SNX3-202ENST00000349379 WASLO00401 505 aaPredicted RBP31.63■■■□□ 2.65
SNX3-202ENST00000349379 EIF3AQ14152 1382 aaKnown RBP31.63■■■□□ 2.65
SNX3-202ENST00000349379 PXDNQ92626 1479 aa31.63■■■□□ 2.65
SNX3-202ENST00000349379 ITSN1Q15811 1721 aa31.63■■■□□ 2.65
SNX3-202ENST00000349379 DISP3Q9P2K9 1392 aa31.61■■■□□ 2.65
SNX3-202ENST00000349379 NPHP3Q7Z494 1330 aa31.6■■■□□ 2.65
SNX3-202ENST00000349379 CENPJQ9HC77 1338 aaPredicted RBP31.6■■■□□ 2.65
SNX3-202ENST00000349379 TOPAZ1Q8N9V7 1692 aa31.59■■■□□ 2.65
SNX3-202ENST00000349379 PRR36Q9H6K5 1346 aa31.58■■■□□ 2.65
SNX3-202ENST00000349379 LRRC59Q96AG4 307 aaKnown RBP31.58■■■□□ 2.65
SNX3-202ENST00000349379 ATP7BP35670 1465 aa31.58■■■□□ 2.65
SNX3-202ENST00000349379 SPATA31A6Q5VVP1 1343 aa31.56■■■□□ 2.64
SNX3-202ENST00000349379 FOXO3O43524 673 aa31.55■■■□□ 2.64
SNX3-202ENST00000349379 TIMELESSQ9UNS1 1208 aa31.55■■■□□ 2.64
SNX3-202ENST00000349379 PHF8Q9UPP1 1060 aa31.55■■■□□ 2.64
SNX3-202ENST00000349379 COL22A1Q8NFW1 1626 aaPredicted RBP31.55■■■□□ 2.64
SNX3-202ENST00000349379 PNPLA6Q8IY17 1366 aa31.55■■■□□ 2.64
SNX3-202ENST00000349379 LRP6O75581 1613 aa31.54■■■□□ 2.64
SNX3-202ENST00000349379 CCER1Q8TC90 406 aaPredicted RBP31.5■■■□□ 2.63
SNX3-202ENST00000349379 CDK19Q9BWU1 502 aa31.5■■■□□ 2.63
SNX3-202ENST00000349379 CARD11Q9BXL7 1154 aa31.49■■■□□ 2.63
SNX3-202ENST00000349379 TRPM3Q9HCF6 1732 aaPredicted RBP31.49■■■□□ 2.63
SNX3-202ENST00000349379 XPCQ01831 940 aaPredicted RBP31.46■■■□□ 2.63
SNX3-202ENST00000349379 NUDT16Q96DE0 195 aaKnown RBP31.46■■■□□ 2.63
SNX3-202ENST00000349379 SBNO2Q9Y2G9 1366 aa31.45■■■□□ 2.63
SNX3-202ENST00000349379 PMFBP1Q8TBY8 1022 aa31.44■■■□□ 2.62
SNX3-202ENST00000349379 KRT28Q7Z3Y7 464 aa31.42■■■□□ 2.62
SNX3-202ENST00000349379 SPATA31A3Q5VYP0 1347 aa31.41■■■□□ 2.62
SNX3-202ENST00000349379 ALS2Q96Q42 1657 aa31.41■■■□□ 2.62
SNX3-202ENST00000349379 SBNO1A3KN83 1393 aa31.41■■■□□ 2.62
SNX3-202ENST00000349379 CCDC61Q9Y6R9 512 aa31.4■■■□□ 2.62
SNX3-202ENST00000349379 TNS3Q68CZ2 1445 aa31.4■■■□□ 2.62
SNX3-202ENST00000349379 MARF1Q9Y4F3 1742 aaKnown RBP31.39■■■□□ 2.62
SNX3-202ENST00000349379 PHF23Q9BUL5 403 aaPredicted RBP31.39■■■□□ 2.62
SNX3-202ENST00000349379 PSME1Q06323 249 aa31.37■■■□□ 2.61
SNX3-202ENST00000349379 RGS17Q9UGC6 210 aaPredicted RBP31.37■■■□□ 2.61
SNX3-202ENST00000349379 POLR3AO14802 1390 aaPredicted RBP31.37■■■□□ 2.61
SNX3-202ENST00000349379 ABCA3Q99758 1704 aa31.36■■■□□ 2.61
SNX3-202ENST00000349379 EVC2Q86UK5 1308 aa31.36■■■□□ 2.61
SNX3-202ENST00000349379 SRPK2P78362 688 aaKnown RBP31.36■■■□□ 2.61
SNX3-202ENST00000349379 PLEKHG3A1L390 1219 aa31.35■■■□□ 2.61
SNX3-202ENST00000349379 CABP2Q9NPB3 220 aa31.35■■■□□ 2.61
SNX3-202ENST00000349379 NUTM2BA6NNL0 878 aaPredicted RBP31.33■■■□□ 2.61
SNX3-202ENST00000349379 NUTM2EB1AL46 878 aaPredicted RBP31.33■■■□□ 2.61
SNX3-202ENST00000349379 NUTM2AQ8IVF1 878 aaPredicted RBP31.33■■■□□ 2.61
SNX3-202ENST00000349379 PPIP5K1Q6PFW1 1433 aa31.32■■■□□ 2.61
SNX3-202ENST00000349379 NGDNQ8NEJ9 315 aaKnown RBP31.32■■■□□ 2.6
SNX3-202ENST00000349379 CRYBG1Q9Y4K1 1723 aa31.3■■■□□ 2.6
SNX3-202ENST00000349379 ARHGEF10O15013 1369 aa31.29■■■□□ 2.6
SNX3-202ENST00000349379 ACEP12821 1306 aa31.28■■■□□ 2.6
SNX3-202ENST00000349379 AKAP12Q02952 1782 aa31.28■■■□□ 2.6
SNX3-202ENST00000349379 MEX3CQ5U5Q3 659 aaKnown RBP31.28■■■□□ 2.6
SNX3-202ENST00000349379 USP47Q96K76 1375 aa31.26■■■□□ 2.59
SNX3-202ENST00000349379 TESK2Q96S53 571 aa31.25■■■□□ 2.59
SNX3-202ENST00000349379 ST20-MTHFSA0A0A6YYL1 179 aa31.24■■■□□ 2.59
SNX3-202ENST00000349379 ATAD2Q6PL18 1390 aa31.24■■■□□ 2.59
SNX3-202ENST00000349379 CABP1Q9NZU7 370 aa31.21■■■□□ 2.59
SNX3-202ENST00000349379 ADAMTS2O95450 1211 aa31.2■■■□□ 2.59
SNX3-202ENST00000349379 POTEAQ6S8J7 498 aa31.19■■■□□ 2.58
SNX3-202ENST00000349379 BRD4O60885 1362 aaPredicted RBP31.18■■■□□ 2.58
SNX3-202ENST00000349379 MON2Q7Z3U7 1717 aa31.18■■■□□ 2.58
SNX3-202ENST00000349379 PUS7Q96PZ0 661 aaKnown RBP31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms