RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 SNAPC4Q5SXM2 1469 aa10.14□□□□□ -0.79
CAST-204ENST00000341926 DHX16O60231 1041 aaKnown RBP10.14□□□□□ -0.79
CAST-204ENST00000341926 CCDC189A1A4V9 331 aa10.14□□□□□ -0.79
CAST-204ENST00000341926 KLHL33A6NCF5 533 aa10.14□□□□□ -0.79
CAST-204ENST00000341926 SLFN14P0C7P3 912 aa10.14□□□□□ -0.79
CAST-204ENST00000341926 NBPF3Q9H094 633 aa10.14□□□□□ -0.79
CAST-204ENST00000341926 PPP1R12AO14974 1030 aaPredicted RBP10.13□□□□□ -0.79
CAST-204ENST00000341926 PRIMPOLQ96LW4 560 aa10.13□□□□□ -0.79
CAST-204ENST00000341926 SPINK5Q9NQ38 1064 aaPredicted RBP10.13□□□□□ -0.79
CAST-204ENST00000341926 OGFRQ9NZT2 677 aa10.13□□□□□ -0.79
CAST-204ENST00000341926 HMGN5P82970 282 aaKnown RBP10.12□□□□□ -0.79
CAST-204ENST00000341926 SWT1Q5T5J6 900 aaKnown RBP10.12□□□□□ -0.79
CAST-204ENST00000341926 CALR3Q96L12 384 aaKnown RBP10.12□□□□□ -0.79
CAST-204ENST00000341926 POLA1P09884 1462 aaPredicted RBP10.12□□□□□ -0.79
CAST-204ENST00000341926 HDAC1Q13547 482 aaPredicted RBP10.12□□□□□ -0.79
CAST-204ENST00000341926 C11orf91Q3C1V1 193 aa10.12□□□□□ -0.79
CAST-204ENST00000341926 ZC3H12AQ5D1E8 599 aaKnown RBP10.11□□□□□ -0.79
CAST-204ENST00000341926 TSPAN18Q96SJ8 248 aa10.11□□□□□ -0.79
CAST-204ENST00000341926 KNSTRNQ9Y448 316 aa10.11□□□□□ -0.79
CAST-204ENST00000341926 SYNJ2O15056 1496 aa10.11□□□□□ -0.79
CAST-204ENST00000341926 MCM4P33991 863 aa10.11□□□□□ -0.79
CAST-204ENST00000341926 RBM25P49756 843 aaKnown RBP10.11□□□□□ -0.79
CAST-204ENST00000341926 FBLN2P98095 1184 aa10.11□□□□□ -0.79
CAST-204ENST00000341926 RSPH14Q9UHP6 348 aa10.11□□□□□ -0.79
CAST-204ENST00000341926 AKNAQ7Z591 1439 aa10.1□□□□□ -0.79
CAST-204ENST00000341926 JMYQ8N9B5 988 aa10.1□□□□□ -0.79
CAST-204ENST00000341926 ANTXR1Q9H6X2 564 aa10.1□□□□□ -0.79
CAST-204ENST00000341926 UPF2Q9HAU5 1272 aaKnown RBP10.1□□□□□ -0.79
CAST-204ENST00000341926 IGF1RP08069 1367 aa10.1□□□□□ -0.79
CAST-204ENST00000341926 EXOC8Q8IYI6 725 aa10.1□□□□□ -0.79
CAST-204ENST00000341926 PAIP2Q9BPZ3 127 aaKnown RBP10.1□□□□□ -0.79
CAST-204ENST00000341926 ERCC6L2Q5T890 1561 aa10.1□□□□□ -0.79
CAST-204ENST00000341926 MPHOSPH10O00566 681 aaKnown RBP10.09□□□□□ -0.79
CAST-204ENST00000341926 TRAK2O60296 914 aa10.09□□□□□ -0.79
CAST-204ENST00000341926 LRCH2Q5VUJ6 765 aa10.09□□□□□ -0.79
CAST-204ENST00000341926 NUDCQ9Y266 331 aa10.09□□□□□ -0.79
CAST-204ENST00000341926 DCAF8L1A6NGE4 600 aa10.09□□□□□ -0.79
CAST-204ENST00000341926 TRDNQ13061 729 aa10.09□□□□□ -0.79
CAST-204ENST00000341926 PDCL2Q8N4E4 241 aa10.09□□□□□ -0.79
CAST-204ENST00000341926 RASSF4Q9H2L5 321 aa10.09□□□□□ -0.79
CAST-204ENST00000341926 COQ9O75208 318 aa10.08□□□□□ -0.8
CAST-204ENST00000341926 FAM177A1Q8N128 213 aaPredicted RBP10.08□□□□□ -0.8
CAST-204ENST00000341926 PNISRQ8TF01 805 aaKnown RBP10.08□□□□□ -0.8
CAST-204ENST00000341926 SUFUQ9UMX1 484 aa10.08□□□□□ -0.8
CAST-204ENST00000341926 IBTKQ9P2D0 1353 aaPredicted RBP10.08□□□□□ -0.8
CAST-204ENST00000341926 CTAGE5O15320 804 aa10.08□□□□□ -0.8
CAST-204ENST00000341926 IPO8O15397 1037 aaKnown RBP10.08□□□□□ -0.8
CAST-204ENST00000341926 LIG1P18858 919 aa10.08□□□□□ -0.8
CAST-204ENST00000341926 TERF2Q15554 542 aa10.08□□□□□ -0.8
CAST-204ENST00000341926 ARMCX6Q7L4S7 300 aa10.08□□□□□ -0.8
CAST-204ENST00000341926 PBRM1Q86U86 1689 aa10.07□□□□□ -0.8
CAST-204ENST00000341926 SCAPERQ9BY12 1400 aa10.07□□□□□ -0.8
CAST-204ENST00000341926 GRIN2BQ13224 1484 aa10.07□□□□□ -0.8
CAST-204ENST00000341926 GSCP56915 257 aaPredicted RBP10.07□□□□□ -0.8
CAST-204ENST00000341926 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
CAST-204ENST00000341926 CXorf56Q9H5V9 222 aa10.07□□□□□ -0.8
CAST-204ENST00000341926 DNAJC14Q6Y2X3 702 aaPredicted RBP10.06□□□□□ -0.8
CAST-204ENST00000341926 ZKSCAN5Q9Y2L8 839 aa10.06□□□□□ -0.8
CAST-204ENST00000341926 ARHGEF1Q92888 912 aaKnown RBP10.06□□□□□ -0.8
CAST-204ENST00000341926 PAXBP1Q9Y5B6 917 aa10.06□□□□□ -0.8
CAST-204ENST00000341926 SPDYE4A6NLX3 237 aa10.05□□□□□ -0.8
CAST-204ENST00000341926 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
CAST-204ENST00000341926 HSP90AB1P08238 724 aaKnown RBP10.05□□□□□ -0.8
CAST-204ENST00000341926 CCDC91Q7Z6B0 441 aa10.05□□□□□ -0.8
CAST-204ENST00000341926 PANK3Q9H999 370 aa10.05□□□□□ -0.8
CAST-204ENST00000341926 ZBTB7CA1YPR0 619 aa10.05□□□□□ -0.8
CAST-204ENST00000341926 XPCQ01831 940 aaPredicted RBP10.05□□□□□ -0.8
CAST-204ENST00000341926 DNAJC21Q5F1R6 531 aaKnown RBP10.05□□□□□ -0.8
CAST-204ENST00000341926 GZF1Q9H116 711 aaPredicted RBP10.05□□□□□ -0.8
CAST-204ENST00000341926 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.05□□□□□ -0.8
CAST-204ENST00000341926 IPO7O95373 1038 aaKnown RBP10.04□□□□□ -0.8
CAST-204ENST00000341926 MYBPC2Q14324 1141 aa10.04□□□□□ -0.8
CAST-204ENST00000341926 RPAINQ86UA6 219 aa10.04□□□□□ -0.8
CAST-204ENST00000341926 ANKRD7Q92527 254 aa10.04□□□□□ -0.8
CAST-204ENST00000341926 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
CAST-204ENST00000341926 KDM4AO75164 1064 aa10.04□□□□□ -0.8
CAST-204ENST00000341926 NEFHP12036 1026 aa10.04□□□□□ -0.8
CAST-204ENST00000341926 RAD51AP2Q09MP3 1159 aa10.04□□□□□ -0.8
CAST-204ENST00000341926 BIRC2Q13490 618 aa10.04□□□□□ -0.8
CAST-204ENST00000341926 UVSSAQ2YD98 709 aa10.04□□□□□ -0.8
CAST-204ENST00000341926 C1QTNF12Q5T7M4 302 aa10.04□□□□□ -0.8
CAST-204ENST00000341926 MSL3Q8N5Y2 521 aaKnown RBP10.04□□□□□ -0.8
CAST-204ENST00000341926 RPS6KL1Q9Y6S9 549 aa10.04□□□□□ -0.8
CAST-204ENST00000341926 CCDC88BA6NC98 1476 aa10.03□□□□□ -0.8
CAST-204ENST00000341926 CASQ1P31415 396 aa10.03□□□□□ -0.8
CAST-204ENST00000341926 CHMP7Q8WUX9 453 aaPredicted RBP10.03□□□□□ -0.8
CAST-204ENST00000341926 NOL10Q9BSC4 688 aaKnown RBP10.03□□□□□ -0.8
CAST-204ENST00000341926 RAD54L2Q9Y4B4 1467 aa10.03□□□□□ -0.8
CAST-204ENST00000341926 SOGA1O94964 1423 aa10.03□□□□□ -0.8
CAST-204ENST00000341926 ANKRD33BA6NCL7 494 aa10.02□□□□□ -0.8
CAST-204ENST00000341926 KDM2AQ9Y2K7 1162 aa10.02□□□□□ -0.8
CAST-204ENST00000341926 KDM6BO15054 1643 aa10.02□□□□□ -0.8
CAST-204ENST00000341926 CCDC196A0A1B0GTZ2 297 aa10.02□□□□□ -0.81
CAST-204ENST00000341926 KDM4FA0A1W2PPD8 638 aa10.02□□□□□ -0.81
CAST-204ENST00000341926 TBC1D22AQ8WUA7 517 aa10.02□□□□□ -0.81
CAST-204ENST00000341926 NECTIN2Q92692 538 aa10.02□□□□□ -0.81
CAST-204ENST00000341926 CT47B1P0C2W7 299 aaPredicted RBP10.01□□□□□ -0.81
CAST-204ENST00000341926 NASPP49321 788 aaPredicted RBP10.01□□□□□ -0.81
CAST-204ENST00000341926 SDR16C5Q8N3Y7 309 aa10.01□□□□□ -0.81
CAST-204ENST00000341926 PDLIM2Q96JY6 352 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms